RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 SOCS7O14512 581 aa12.8□□□□□ -0.36
COL6A4P1-204ENST00000508169 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
COL6A4P1-204ENST00000508169 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
COL6A4P1-204ENST00000508169 ANKRD13DQ6ZTN6 518 aa12.79□□□□□ -0.36
COL6A4P1-204ENST00000508169 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
COL6A4P1-204ENST00000508169 C6orf229H3BNL8 230 aa12.77□□□□□ -0.37
COL6A4P1-204ENST00000508169 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
COL6A4P1-204ENST00000508169 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
COL6A4P1-204ENST00000508169 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
COL6A4P1-204ENST00000508169 HELBQ8NG08 1087 aaPredicted RBP12.75□□□□□ -0.37
COL6A4P1-204ENST00000508169 PRM3Q9NNZ6 103 aa12.75□□□□□ -0.37
COL6A4P1-204ENST00000508169 TSC1Q92574 1164 aa12.74□□□□□ -0.37
COL6A4P1-204ENST00000508169 ARID3AQ99856 593 aa12.74□□□□□ -0.37
COL6A4P1-204ENST00000508169 GDPD2Q9HCC8 539 aa12.74□□□□□ -0.37
COL6A4P1-204ENST00000508169 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
COL6A4P1-204ENST00000508169 MORN1Q5T089 497 aa12.73□□□□□ -0.37
COL6A4P1-204ENST00000508169 CFAP99D6REC4 459 aa12.72□□□□□ -0.37
COL6A4P1-204ENST00000508169 PPP4CP60510 307 aa12.72□□□□□ -0.37
COL6A4P1-204ENST00000508169 CTDSPL2Q05D32 466 aa12.72□□□□□ -0.37
COL6A4P1-204ENST00000508169 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
COL6A4P1-204ENST00000508169 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
COL6A4P1-204ENST00000508169 BCAMP50895 628 aa12.71□□□□□ -0.37
COL6A4P1-204ENST00000508169 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
COL6A4P1-204ENST00000508169 WNT2BQ93097 391 aa12.71□□□□□ -0.37
COL6A4P1-204ENST00000508169 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
COL6A4P1-204ENST00000508169 Q3C1V9 767 aa12.7□□□□□ -0.38
COL6A4P1-204ENST00000508169 WWC1Q8IX03 1113 aa12.7□□□□□ -0.38
COL6A4P1-204ENST00000508169 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
COL6A4P1-204ENST00000508169 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
COL6A4P1-204ENST00000508169 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
COL6A4P1-204ENST00000508169 ABL2P42684 1182 aa12.69□□□□□ -0.38
COL6A4P1-204ENST00000508169 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
COL6A4P1-204ENST00000508169 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
COL6A4P1-204ENST00000508169 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P1-204ENST00000508169 HMX1Q9NP08 348 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P1-204ENST00000508169 ZNF330Q9Y3S2 320 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P1-204ENST00000508169 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
COL6A4P1-204ENST00000508169 APLP1P51693 650 aa12.66□□□□□ -0.38
COL6A4P1-204ENST00000508169 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
COL6A4P1-204ENST00000508169 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
COL6A4P1-204ENST00000508169 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
COL6A4P1-204ENST00000508169 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
COL6A4P1-204ENST00000508169 PCDHB3Q9Y5E6 796 aa12.63□□□□□ -0.39
COL6A4P1-204ENST00000508169 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
COL6A4P1-204ENST00000508169 RNF19BQ6ZMZ0 732 aa12.62□□□□□ -0.39
COL6A4P1-204ENST00000508169 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
COL6A4P1-204ENST00000508169 DESI1Q6ICB0 168 aa12.61□□□□□ -0.39
COL6A4P1-204ENST00000508169 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
COL6A4P1-204ENST00000508169 NR1I2O75469 434 aa12.6□□□□□ -0.39
COL6A4P1-204ENST00000508169 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
COL6A4P1-204ENST00000508169 BRICD5Q6PL45 260 aa12.59□□□□□ -0.39
COL6A4P1-204ENST00000508169 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
COL6A4P1-204ENST00000508169 CCDC97Q96F63 343 aaPredicted RBP12.59□□□□□ -0.39
COL6A4P1-204ENST00000508169 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
COL6A4P1-204ENST00000508169 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
COL6A4P1-204ENST00000508169 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
COL6A4P1-204ENST00000508169 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
COL6A4P1-204ENST00000508169 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
COL6A4P1-204ENST00000508169 IRF5Q13568 498 aa12.57□□□□□ -0.4
COL6A4P1-204ENST00000508169 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
COL6A4P1-204ENST00000508169 EPS8L1Q8TE68 723 aa12.56□□□□□ -0.4
COL6A4P1-204ENST00000508169 THAP11Q96EK4 314 aa12.56□□□□□ -0.4
COL6A4P1-204ENST00000508169 POM121CA8CG34 1229 aa12.55□□□□□ -0.4
COL6A4P1-204ENST00000508169 GPR37L1O60883 481 aa12.55□□□□□ -0.4
COL6A4P1-204ENST00000508169 NR6A1Q15406 480 aa12.54□□□□□ -0.4
COL6A4P1-204ENST00000508169 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
COL6A4P1-204ENST00000508169 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
COL6A4P1-204ENST00000508169 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
COL6A4P1-204ENST00000508169 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
COL6A4P1-204ENST00000508169 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
COL6A4P1-204ENST00000508169 GLMNQ92990 594 aa12.51□□□□□ -0.41
COL6A4P1-204ENST00000508169 JUNDP17535 347 aa12.5□□□□□ -0.41
COL6A4P1-204ENST00000508169 COPS2P61201 443 aa12.5□□□□□ -0.41
COL6A4P1-204ENST00000508169 PNMA1Q8ND90 353 aa12.5□□□□□ -0.41
COL6A4P1-204ENST00000508169 VAC14Q08AM6 782 aa12.48□□□□□ -0.41
COL6A4P1-204ENST00000508169 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
COL6A4P1-204ENST00000508169 SPSB2Q99619 263 aa12.48□□□□□ -0.41
COL6A4P1-204ENST00000508169 PTPRNQ16849 979 aa12.47□□□□□ -0.41
COL6A4P1-204ENST00000508169 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
COL6A4P1-204ENST00000508169 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
COL6A4P1-204ENST00000508169 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
COL6A4P1-204ENST00000508169 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
COL6A4P1-204ENST00000508169 POTEMA6NI47 508 aa12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 DXOO77932 396 aaKnown RBP12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 PTPN5P54829 565 aa12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
COL6A4P1-204ENST00000508169 ZPR1O75312 459 aa12.42□□□□□ -0.42
COL6A4P1-204ENST00000508169 MTRQ99707 1265 aa12.42□□□□□ -0.42
COL6A4P1-204ENST00000508169 TLL1O43897 1013 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 ADH1BP00325 375 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 CTHP32929 405 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 MMP16P51512 607 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 PRDM9Q9NQV7 894 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 FKBPLQ9UIM3 349 aa12.41□□□□□ -0.42
COL6A4P1-204ENST00000508169 SOX11P35716 441 aa12.4□□□□□ -0.42
COL6A4P1-204ENST00000508169 NUDT12Q9BQG2 462 aa12.4□□□□□ -0.42
COL6A4P1-204ENST00000508169 ALG2Q9H553 416 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms