RNA–Protein interactions for RNA: ENST00000507620.2

ATR-204, Transcript of ATR serine/threonine kinase, humanhuman

TSL 5

Gene ATR, Length 837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-204ENST00000507620 HLA-CQ95604 372 aa9.7□□□□□ -0.86
ATR-204ENST00000507620 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
ATR-204ENST00000507620 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
ATR-204ENST00000507620 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
ATR-204ENST00000507620 MTMR2Q13614 643 aa9.69□□□□□ -0.86
ATR-204ENST00000507620 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
ATR-204ENST00000507620 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
ATR-204ENST00000507620 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
ATR-204ENST00000507620 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
ATR-204ENST00000507620 BRICD5Q6PL45 260 aa9.68□□□□□ -0.86
ATR-204ENST00000507620 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
ATR-204ENST00000507620 SPSB2Q99619 263 aa9.68□□□□□ -0.86
ATR-204ENST00000507620 PCDHGC3Q9UN70 934 aa9.68□□□□□ -0.86
ATR-204ENST00000507620 ADH1BP00325 375 aa9.67□□□□□ -0.86
ATR-204ENST00000507620 RETREG3Q86VR2 466 aa9.67□□□□□ -0.86
ATR-204ENST00000507620 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
ATR-204ENST00000507620 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
ATR-204ENST00000507620 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
ATR-204ENST00000507620 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
ATR-204ENST00000507620 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATR-204ENST00000507620 PCDHB15Q9Y5E8 787 aa9.66□□□□□ -0.86
ATR-204ENST00000507620 HRCP23327 699 aa9.65□□□□□ -0.86
ATR-204ENST00000507620 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.86
ATR-204ENST00000507620 PROCA1Q8NCQ7 364 aaPredicted RBP9.65□□□□□ -0.86
ATR-204ENST00000507620 LILRB3O75022 631 aa9.64□□□□□ -0.87
ATR-204ENST00000507620 TLL1O43897 1013 aa9.63□□□□□ -0.87
ATR-204ENST00000507620 GGCXP38435 758 aa9.63□□□□□ -0.87
ATR-204ENST00000507620 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
ATR-204ENST00000507620 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
ATR-204ENST00000507620 QPCTQ16769 361 aa9.62□□□□□ -0.87
ATR-204ENST00000507620 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
ATR-204ENST00000507620 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
ATR-204ENST00000507620 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
ATR-204ENST00000507620 PRR7Q8TB68 274 aa9.61□□□□□ -0.87
ATR-204ENST00000507620 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
ATR-204ENST00000507620 DESI1Q6ICB0 168 aa9.6□□□□□ -0.87
ATR-204ENST00000507620 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
ATR-204ENST00000507620 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
ATR-204ENST00000507620 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
ATR-204ENST00000507620 TSC1Q92574 1164 aa9.58□□□□□ -0.88
ATR-204ENST00000507620 JUNDP17535 347 aa9.57□□□□□ -0.88
ATR-204ENST00000507620 RFC5P40937 340 aa9.57□□□□□ -0.88
ATR-204ENST00000507620 TMEM259Q4ZIN3 620 aa9.57□□□□□ -0.88
ATR-204ENST00000507620 S1PR4O95977 384 aa9.56□□□□□ -0.88
ATR-204ENST00000507620 MMP16P51512 607 aa9.56□□□□□ -0.88
ATR-204ENST00000507620 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
ATR-204ENST00000507620 DXOO77932 396 aaKnown RBP9.55□□□□□ -0.88
ATR-204ENST00000507620 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
ATR-204ENST00000507620 A0A0G2JS52 829 aa9.54□□□□□ -0.88
ATR-204ENST00000507620 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
ATR-204ENST00000507620 AP1G2O75843 785 aa9.53□□□□□ -0.88
ATR-204ENST00000507620 PTPRNQ16849 979 aa9.53□□□□□ -0.88
ATR-204ENST00000507620 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
ATR-204ENST00000507620 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
ATR-204ENST00000507620 LYPD8Q6UX82 237 aa9.51□□□□□ -0.89
ATR-204ENST00000507620 BANK1Q8NDB2 785 aa9.51□□□□□ -0.89
ATR-204ENST00000507620 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
ATR-204ENST00000507620 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
ATR-204ENST00000507620 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
ATR-204ENST00000507620 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
ATR-204ENST00000507620 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
ATR-204ENST00000507620 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
ATR-204ENST00000507620 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
ATR-204ENST00000507620 APBB1O00213 710 aa9.48□□□□□ -0.89
ATR-204ENST00000507620 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
ATR-204ENST00000507620 ZBTB24O43167 697 aaPredicted RBP9.47□□□□□ -0.89
ATR-204ENST00000507620 PPEF1O14829 653 aaPredicted RBP9.46□□□□□ -0.9
ATR-204ENST00000507620 EVA1BQ9NVM1 165 aa9.46□□□□□ -0.9
ATR-204ENST00000507620 SOCS7O14512 581 aa9.45□□□□□ -0.9
ATR-204ENST00000507620 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
ATR-204ENST00000507620 CTHP32929 405 aa9.45□□□□□ -0.9
ATR-204ENST00000507620 FLIIQ13045 1269 aa9.45□□□□□ -0.9
ATR-204ENST00000507620 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
ATR-204ENST00000507620 KCNH2Q12809 1159 aa9.44□□□□□ -0.9
ATR-204ENST00000507620 PRM3Q9NNZ6 103 aa9.43□□□□□ -0.9
ATR-204ENST00000507620 RGS20O76081 388 aa9.42□□□□□ -0.9
ATR-204ENST00000507620 F12P00748 615 aaPredicted RBP9.42□□□□□ -0.9
ATR-204ENST00000507620 RPIAP49247 311 aa9.42□□□□□ -0.9
ATR-204ENST00000507620 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
ATR-204ENST00000507620 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
ATR-204ENST00000507620 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
ATR-204ENST00000507620 CD2BP2O95400 341 aaKnown RBP9.4□□□□□ -0.9
ATR-204ENST00000507620 MAP10Q9P2G4 905 aa9.4□□□□□ -0.9
ATR-204ENST00000507620 SLC19A1P41440 591 aa9.39□□□□□ -0.91
ATR-204ENST00000507620 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
ATR-204ENST00000507620 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
ATR-204ENST00000507620 MCM6Q14566 821 aa9.38□□□□□ -0.91
ATR-204ENST00000507620 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
ATR-204ENST00000507620 SNRKQ9NRH2 765 aa9.38□□□□□ -0.91
ATR-204ENST00000507620 TRIM32Q13049 653 aa9.37□□□□□ -0.91
ATR-204ENST00000507620 NR6A1Q15406 480 aa9.37□□□□□ -0.91
ATR-204ENST00000507620 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
ATR-204ENST00000507620 PTCRAQ6ISU1 281 aaPredicted RBP9.37□□□□□ -0.91
ATR-204ENST00000507620 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
ATR-204ENST00000507620 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
ATR-204ENST00000507620 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
ATR-204ENST00000507620 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
ATR-204ENST00000507620 ZC3H4Q9UPT8 1303 aaKnown RBP9.36□□□□□ -0.91
ATR-204ENST00000507620 NDUFB9Q9Y6M9 179 aa9.36□□□□□ -0.91
ATR-204ENST00000507620 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms