RNA–Protein interactions for RNA: ENST00000507620.2

ATR-204, Transcript of ATR serine/threonine kinase, humanhuman

TSL 5

Gene ATR, Length 837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-204ENST00000507620 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
ATR-204ENST00000507620 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
ATR-204ENST00000507620 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
ATR-204ENST00000507620 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
ATR-204ENST00000507620 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
ATR-204ENST00000507620 FOXD1Q16676 465 aa18.75■□□□□ 0.59
ATR-204ENST00000507620 ADRA2BP18089 450 aa17.93■□□□□ 0.46
ATR-204ENST00000507620 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
ATR-204ENST00000507620 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
ATR-204ENST00000507620 MSH5O43196 834 aa17.35■□□□□ 0.37
ATR-204ENST00000507620 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
ATR-204ENST00000507620 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
ATR-204ENST00000507620 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
ATR-204ENST00000507620 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
ATR-204ENST00000507620 KCNA4P22459 653 aa16.28■□□□□ 0.2
ATR-204ENST00000507620 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
ATR-204ENST00000507620 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
ATR-204ENST00000507620 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
ATR-204ENST00000507620 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
ATR-204ENST00000507620 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
ATR-204ENST00000507620 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
ATR-204ENST00000507620 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
ATR-204ENST00000507620 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
ATR-204ENST00000507620 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
ATR-204ENST00000507620 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
ATR-204ENST00000507620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
ATR-204ENST00000507620 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
ATR-204ENST00000507620 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
ATR-204ENST00000507620 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
ATR-204ENST00000507620 ZBTB22O15209 634 aa14.93□□□□□ -0.02
ATR-204ENST00000507620 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
ATR-204ENST00000507620 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
ATR-204ENST00000507620 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
ATR-204ENST00000507620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
ATR-204ENST00000507620 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
ATR-204ENST00000507620 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
ATR-204ENST00000507620 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
ATR-204ENST00000507620 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
ATR-204ENST00000507620 APLP2Q06481 763 aa14.59□□□□□ -0.07
ATR-204ENST00000507620 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
ATR-204ENST00000507620 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
ATR-204ENST00000507620 CAPN15O75808 1086 aa14.35□□□□□ -0.11
ATR-204ENST00000507620 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
ATR-204ENST00000507620 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
ATR-204ENST00000507620 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
ATR-204ENST00000507620 ABCB7O75027 752 aa14.07□□□□□ -0.16
ATR-204ENST00000507620 DSG3P32926 999 aa14.07□□□□□ -0.16
ATR-204ENST00000507620 POLA2Q14181 598 aa14.02□□□□□ -0.17
ATR-204ENST00000507620 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
ATR-204ENST00000507620 FBLN2P98095 1184 aa13.84□□□□□ -0.19
ATR-204ENST00000507620 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
ATR-204ENST00000507620 FKBP8Q14318 412 aa13.56□□□□□ -0.24
ATR-204ENST00000507620 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
ATR-204ENST00000507620 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
ATR-204ENST00000507620 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
ATR-204ENST00000507620 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
ATR-204ENST00000507620 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
ATR-204ENST00000507620 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
ATR-204ENST00000507620 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
ATR-204ENST00000507620 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
ATR-204ENST00000507620 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
ATR-204ENST00000507620 PROM2Q8N271 834 aa13.24□□□□□ -0.29
ATR-204ENST00000507620 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATR-204ENST00000507620 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
ATR-204ENST00000507620 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
ATR-204ENST00000507620 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
ATR-204ENST00000507620 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
ATR-204ENST00000507620 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
ATR-204ENST00000507620 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
ATR-204ENST00000507620 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
ATR-204ENST00000507620 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
ATR-204ENST00000507620 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
ATR-204ENST00000507620 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
ATR-204ENST00000507620 MIER1Q8N108 512 aa12.82□□□□□ -0.36
ATR-204ENST00000507620 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
ATR-204ENST00000507620 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
ATR-204ENST00000507620 POTEHQ6S545 545 aa12.74□□□□□ -0.37
ATR-204ENST00000507620 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
ATR-204ENST00000507620 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATR-204ENST00000507620 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
ATR-204ENST00000507620 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
ATR-204ENST00000507620 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
ATR-204ENST00000507620 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
ATR-204ENST00000507620 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
ATR-204ENST00000507620 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
ATR-204ENST00000507620 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATR-204ENST00000507620 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
ATR-204ENST00000507620 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
ATR-204ENST00000507620 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
ATR-204ENST00000507620 HAX1O00165 279 aa12.44□□□□□ -0.42
ATR-204ENST00000507620 NUBP1P53384 320 aa12.42□□□□□ -0.42
ATR-204ENST00000507620 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
ATR-204ENST00000507620 GSE1Q14687 1217 aa12.4□□□□□ -0.42
ATR-204ENST00000507620 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
ATR-204ENST00000507620 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
ATR-204ENST00000507620 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
ATR-204ENST00000507620 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
ATR-204ENST00000507620 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
ATR-204ENST00000507620 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
ATR-204ENST00000507620 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms