RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.96□□□□□ -0.17
COPS4-205ENST00000507376 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
COPS4-205ENST00000507376 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
COPS4-205ENST00000507376 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
COPS4-205ENST00000507376 GLI3P10071 1580 aa13.95□□□□□ -0.18
COPS4-205ENST00000507376 MYOM2P54296 1465 aa13.94□□□□□ -0.18
COPS4-205ENST00000507376 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
COPS4-205ENST00000507376 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
COPS4-205ENST00000507376 USP21Q9UK80 565 aa13.93□□□□□ -0.18
COPS4-205ENST00000507376 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
COPS4-205ENST00000507376 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
COPS4-205ENST00000507376 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
COPS4-205ENST00000507376 PXDNQ92626 1479 aa13.91□□□□□ -0.18
COPS4-205ENST00000507376 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
COPS4-205ENST00000507376 NUP155O75694 1391 aa13.9□□□□□ -0.18
COPS4-205ENST00000507376 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
COPS4-205ENST00000507376 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
COPS4-205ENST00000507376 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
COPS4-205ENST00000507376 LRP5O75197 1615 aa13.89□□□□□ -0.19
COPS4-205ENST00000507376 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
COPS4-205ENST00000507376 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
COPS4-205ENST00000507376 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
COPS4-205ENST00000507376 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
COPS4-205ENST00000507376 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
COPS4-205ENST00000507376 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
COPS4-205ENST00000507376 KIF1BO60333 1816 aa13.86□□□□□ -0.19
COPS4-205ENST00000507376 APLP2Q06481 763 aa13.86□□□□□ -0.19
COPS4-205ENST00000507376 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
COPS4-205ENST00000507376 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
COPS4-205ENST00000507376 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
COPS4-205ENST00000507376 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
COPS4-205ENST00000507376 PPLO60437 1756 aa13.84□□□□□ -0.19
COPS4-205ENST00000507376 USP32Q8NFA0 1604 aa13.84□□□□□ -0.19
COPS4-205ENST00000507376 ITGAEP38570 1179 aa13.84□□□□□ -0.19
COPS4-205ENST00000507376 ROCK1Q13464 1354 aa13.83□□□□□ -0.19
COPS4-205ENST00000507376 SLIT2O94813 1529 aa13.82□□□□□ -0.2
COPS4-205ENST00000507376 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
COPS4-205ENST00000507376 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
COPS4-205ENST00000507376 PSDA5PKW4 1024 aaPredicted RBP13.81□□□□□ -0.2
COPS4-205ENST00000507376 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
COPS4-205ENST00000507376 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
COPS4-205ENST00000507376 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
COPS4-205ENST00000507376 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
COPS4-205ENST00000507376 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
COPS4-205ENST00000507376 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
COPS4-205ENST00000507376 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
COPS4-205ENST00000507376 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
COPS4-205ENST00000507376 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
COPS4-205ENST00000507376 NAIPQ13075 1403 aa13.78□□□□□ -0.2
COPS4-205ENST00000507376 FOXO3O43524 673 aa13.77□□□□□ -0.21
COPS4-205ENST00000507376 NRAPQ86VF7 1730 aa13.77□□□□□ -0.21
COPS4-205ENST00000507376 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
COPS4-205ENST00000507376 CAPN15O75808 1086 aa13.76□□□□□ -0.21
COPS4-205ENST00000507376 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
COPS4-205ENST00000507376 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
COPS4-205ENST00000507376 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
COPS4-205ENST00000507376 TNS1Q9HBL0 1735 aaKnown RBP13.75□□□□□ -0.21
COPS4-205ENST00000507376 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
COPS4-205ENST00000507376 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
COPS4-205ENST00000507376 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
COPS4-205ENST00000507376 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
COPS4-205ENST00000507376 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
COPS4-205ENST00000507376 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
COPS4-205ENST00000507376 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
COPS4-205ENST00000507376 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
COPS4-205ENST00000507376 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
COPS4-205ENST00000507376 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
COPS4-205ENST00000507376 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
COPS4-205ENST00000507376 HRCP23327 699 aa13.7□□□□□ -0.22
COPS4-205ENST00000507376 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
COPS4-205ENST00000507376 ADGRF5Q8IZF2 1346 aa13.69□□□□□ -0.22
COPS4-205ENST00000507376 STK26Q9P289 416 aa13.69□□□□□ -0.22
COPS4-205ENST00000507376 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
COPS4-205ENST00000507376 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
COPS4-205ENST00000507376 TECPR2O15040 1411 aa13.68□□□□□ -0.22
COPS4-205ENST00000507376 DSG3P32926 999 aa13.68□□□□□ -0.22
COPS4-205ENST00000507376 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
COPS4-205ENST00000507376 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
COPS4-205ENST00000507376 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
COPS4-205ENST00000507376 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
COPS4-205ENST00000507376 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
COPS4-205ENST00000507376 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
COPS4-205ENST00000507376 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
COPS4-205ENST00000507376 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
COPS4-205ENST00000507376 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
COPS4-205ENST00000507376 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
COPS4-205ENST00000507376 VPS72Q15906 364 aa13.64□□□□□ -0.23
COPS4-205ENST00000507376 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
COPS4-205ENST00000507376 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
COPS4-205ENST00000507376 A0A0G2JS52 829 aa13.63□□□□□ -0.23
COPS4-205ENST00000507376 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
COPS4-205ENST00000507376 MYT1Q01538 1121 aa13.63□□□□□ -0.23
COPS4-205ENST00000507376 SF3B2Q13435 895 aaKnown RBP13.63□□□□□ -0.23
COPS4-205ENST00000507376 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
COPS4-205ENST00000507376 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
COPS4-205ENST00000507376 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
COPS4-205ENST00000507376 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
COPS4-205ENST00000507376 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
COPS4-205ENST00000507376 RREB1Q92766 1687 aa13.62□□□□□ -0.23
COPS4-205ENST00000507376 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms