RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 BRD4O60885 1362 aaPredicted RBP25.19■■□□□ 1.62
SMN1-205ENST00000506239 FAM135BQ49AJ0 1406 aa25.19■■□□□ 1.62
SMN1-205ENST00000506239 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
SMN1-205ENST00000506239 AMER1Q5JTC6 1135 aaPredicted RBP25.18■■□□□ 1.62
SMN1-205ENST00000506239 NINLQ9Y2I6 1382 aa25.17■■□□□ 1.62
SMN1-205ENST00000506239 CNGB1Q14028 1251 aaPredicted RBP25.17■■□□□ 1.62
SMN1-205ENST00000506239 SAFB2Q14151 953 aaKnown RBP eCLIP25.17■■□□□ 1.62
SMN1-205ENST00000506239 BCANQ96GW7 911 aa25.15■■□□□ 1.62
SMN1-205ENST00000506239 ATAD2Q6PL18 1390 aa25.14■■□□□ 1.61
SMN1-205ENST00000506239 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.61
SMN1-205ENST00000506239 CC2D1BQ5T0F9 858 aaKnown RBP25.14■■□□□ 1.61
SMN1-205ENST00000506239 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
SMN1-205ENST00000506239 PLEKHH1Q9ULM0 1364 aa25.12■■□□□ 1.61
SMN1-205ENST00000506239 CARD14Q9BXL6 1004 aa25.12■■□□□ 1.61
SMN1-205ENST00000506239 TBX22Q9Y458 520 aa25.12■■□□□ 1.61
SMN1-205ENST00000506239 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
SMN1-205ENST00000506239 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
SMN1-205ENST00000506239 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
SMN1-205ENST00000506239 SLC12A5Q9H2X9 1139 aa25.1■■□□□ 1.61
SMN1-205ENST00000506239 ANKRD36BQ8N2N9 1353 aa25.1■■□□□ 1.61
SMN1-205ENST00000506239 TMC1Q8TDI8 760 aa25.1■■□□□ 1.61
SMN1-205ENST00000506239 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
SMN1-205ENST00000506239 PTPRUQ92729 1446 aa25.07■■□□□ 1.6
SMN1-205ENST00000506239 FAM9BQ8IZU0 186 aa25.06■■□□□ 1.6
SMN1-205ENST00000506239 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
SMN1-205ENST00000506239 CDK19Q9BWU1 502 aa25.06■■□□□ 1.6
SMN1-205ENST00000506239 NSD3Q9BZ95 1437 aa25.06■■□□□ 1.6
SMN1-205ENST00000506239 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
SMN1-205ENST00000506239 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
SMN1-205ENST00000506239 ADGRB2O60241 1585 aa25.04■■□□□ 1.6
SMN1-205ENST00000506239 PTCH1Q13635 1447 aa25.04■■□□□ 1.6
SMN1-205ENST00000506239 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
SMN1-205ENST00000506239 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
SMN1-205ENST00000506239 HNRNPUQ00839 825 aaKnown RBP eCLIP25.01■■□□□ 1.59
SMN1-205ENST00000506239 XRN1Q8IZH2 1706 aaKnown RBP25.01■■□□□ 1.59
SMN1-205ENST00000506239 WASLO00401 505 aaPredicted RBP25.01■■□□□ 1.59
SMN1-205ENST00000506239 CD163L1Q9NR16 1453 aa25■■□□□ 1.59
SMN1-205ENST00000506239 PPP2R1AP30153 589 aa24.99■■□□□ 1.59
SMN1-205ENST00000506239 A0A1W2PP64 1363 aa24.99■■□□□ 1.59
SMN1-205ENST00000506239 NSD2O96028 1365 aa24.98■■□□□ 1.59
SMN1-205ENST00000506239 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.97■■□□□ 1.59
SMN1-205ENST00000506239 ATP7BP35670 1465 aa24.97■■□□□ 1.59
SMN1-205ENST00000506239 CGNL1Q0VF96 1302 aa24.97■■□□□ 1.59
SMN1-205ENST00000506239 AMOTL2Q9Y2J4 779 aa24.97■■□□□ 1.59
SMN1-205ENST00000506239 TERF2IPQ9NYB0 399 aa24.97■■□□□ 1.59
SMN1-205ENST00000506239 INSRP06213 1382 aa24.95■■□□□ 1.58
SMN1-205ENST00000506239 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
SMN1-205ENST00000506239 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
SMN1-205ENST00000506239 CABP1Q9NZU7 370 aa24.92■■□□□ 1.58
SMN1-205ENST00000506239 CHD2O14647 1828 aaKnown RBP24.9■■□□□ 1.58
SMN1-205ENST00000506239 NPHP4O75161 1426 aaPredicted RBP24.89■■□□□ 1.58
SMN1-205ENST00000506239 PPIP5K1Q6PFW1 1433 aa24.89■■□□□ 1.57
SMN1-205ENST00000506239 CPSF1Q10570 1443 aaKnown RBP24.88■■□□□ 1.57
SMN1-205ENST00000506239 MORC1Q86VD1 984 aa24.88■■□□□ 1.57
SMN1-205ENST00000506239 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
SMN1-205ENST00000506239 CDC42BPGQ6DT37 1551 aa24.88■■□□□ 1.57
SMN1-205ENST00000506239 SCAF1Q9H7N4 1312 aaKnown RBP24.87■■□□□ 1.57
SMN1-205ENST00000506239 CCDC61Q9Y6R9 512 aa24.87■■□□□ 1.57
SMN1-205ENST00000506239 ANKRD26Q9UPS8 1709 aa24.87■■□□□ 1.57
SMN1-205ENST00000506239 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
SMN1-205ENST00000506239 KCNA6P17658 529 aa24.84■■□□□ 1.57
SMN1-205ENST00000506239 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.57
SMN1-205ENST00000506239 BLMP54132 1417 aaPredicted RBP24.83■■□□□ 1.57
SMN1-205ENST00000506239 GTF3C3Q9Y5Q9 886 aa24.83■■□□□ 1.57
SMN1-205ENST00000506239 KIF20BQ96Q89 1820 aa24.83■■□□□ 1.57
SMN1-205ENST00000506239 POLR3AO14802 1390 aaPredicted RBP24.82■■□□□ 1.56
SMN1-205ENST00000506239 MON2Q7Z3U7 1717 aa24.82■■□□□ 1.56
SMN1-205ENST00000506239 AKAP12Q02952 1782 aa24.82■■□□□ 1.56
SMN1-205ENST00000506239 EDC4Q6P2E9 1401 aaKnown RBP24.81■■□□□ 1.56
SMN1-205ENST00000506239 ITSN1Q15811 1721 aa24.8■■□□□ 1.56
SMN1-205ENST00000506239 FYB1O15117 783 aa24.8■■□□□ 1.56
SMN1-205ENST00000506239 NWD1Q149M9 1564 aa24.78■■□□□ 1.56
SMN1-205ENST00000506239 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
SMN1-205ENST00000506239 PLEKHG3A1L390 1219 aa24.76■■□□□ 1.55
SMN1-205ENST00000506239 ZNF692Q9BU19 519 aaPredicted RBP24.76■■□□□ 1.55
SMN1-205ENST00000506239 ANKARQ7Z5J8 1434 aa24.76■■□□□ 1.55
SMN1-205ENST00000506239 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SMN1-205ENST00000506239 KDM4FA0A1W2PPD8 638 aa24.75■■□□□ 1.55
SMN1-205ENST00000506239 GGNBP2Q9H3C7 697 aa24.75■■□□□ 1.55
SMN1-205ENST00000506239 FMN2Q9NZ56 1722 aa24.74■■□□□ 1.55
SMN1-205ENST00000506239 ADAMTS8Q9UP79 889 aa24.74■■□□□ 1.55
SMN1-205ENST00000506239 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
SMN1-205ENST00000506239 NRKQ7Z2Y5 1582 aa24.73■■□□□ 1.55
SMN1-205ENST00000506239 NALCNQ8IZF0 1738 aa24.72■■□□□ 1.55
SMN1-205ENST00000506239 TNNT2P45379 298 aaPredicted RBP24.71■■□□□ 1.55
SMN1-205ENST00000506239 SHPRHQ149N8 1683 aa24.71■■□□□ 1.55
SMN1-205ENST00000506239 MTHFSP49914 203 aa24.69■■□□□ 1.54
SMN1-205ENST00000506239 ADGRL3Q9HAR2 1447 aa24.68■■□□□ 1.54
SMN1-205ENST00000506239 ACEP12821 1306 aa24.68■■□□□ 1.54
SMN1-205ENST00000506239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.67■■□□□ 1.54
SMN1-205ENST00000506239 CFAP53Q96M91 514 aa24.67■■□□□ 1.54
SMN1-205ENST00000506239 USP6P35125 1406 aa24.67■■□□□ 1.54
SMN1-205ENST00000506239 SMG6Q86US8 1419 aaKnown RBP24.66■■□□□ 1.54
SMN1-205ENST00000506239 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
SMN1-205ENST00000506239 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
SMN1-205ENST00000506239 LMTK3Q96Q04 1460 aa24.65■■□□□ 1.54
SMN1-205ENST00000506239 NUTM2FA1L443 756 aa24.64■■□□□ 1.54
SMN1-205ENST00000506239 COL3A1P02461 1466 aaPredicted RBP24.62■■□□□ 1.53
SMN1-205ENST00000506239 NME9Q86XW9 330 aa24.62■■□□□ 1.53
SMN1-205ENST00000506239 TTC21BQ7Z4L5 1316 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms