RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CASKIN1Q8WXD9 1431 aa7.01□□□□□ -1.29
CPNE4-204ENST00000505331 A0A0G2JS52 829 aa7□□□□□ -1.29
CPNE4-204ENST00000505331 MYT1Q01538 1121 aa7□□□□□ -1.29
CPNE4-204ENST00000505331 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
CPNE4-204ENST00000505331 ZFYVE9O95405 1425 aa7□□□□□ -1.29
CPNE4-204ENST00000505331 TNS4Q8IZW8 715 aa6.99□□□□□ -1.29
CPNE4-204ENST00000505331 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.99□□□□□ -1.29
CPNE4-204ENST00000505331 CCDC9Q9Y3X0 531 aaKnown RBP6.99□□□□□ -1.29
CPNE4-204ENST00000505331 ADGRB3O60242 1522 aa6.99□□□□□ -1.29
CPNE4-204ENST00000505331 CAMTA1Q9Y6Y1 1673 aa6.99□□□□□ -1.29
CPNE4-204ENST00000505331 CHD2O14647 1828 aaKnown RBP6.99□□□□□ -1.29
CPNE4-204ENST00000505331 ADAMTS13Q76LX8 1427 aa6.98□□□□□ -1.29
CPNE4-204ENST00000505331 C1orf167Q5SNV9 1468 aa6.98□□□□□ -1.29
CPNE4-204ENST00000505331 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-204ENST00000505331 APBA3O96018 575 aa6.97□□□□□ -1.29
CPNE4-204ENST00000505331 EEA1Q15075 1411 aa6.97□□□□□ -1.29
CPNE4-204ENST00000505331 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
CPNE4-204ENST00000505331 RIMS2Q9UQ26 1411 aa6.97□□□□□ -1.29
CPNE4-204ENST00000505331 TRPM2O94759 1503 aa6.96□□□□□ -1.29
CPNE4-204ENST00000505331 EHBP1L1Q8N3D4 1523 aa6.96□□□□□ -1.29
CPNE4-204ENST00000505331 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.96□□□□□ -1.29
CPNE4-204ENST00000505331 PTPRUQ92729 1446 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 ADGRL3Q9HAR2 1447 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 ORAI2Q96SN7 254 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 LAMC1P11047 1609 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 UTRNP46939 3433 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 NPHP3Q7Z494 1330 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 LRRIQ1Q96JM4 1722 aa6.96□□□□□ -1.3
CPNE4-204ENST00000505331 NOS1P29475 1434 aa6.95□□□□□ -1.3
CPNE4-204ENST00000505331 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
CPNE4-204ENST00000505331 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
CPNE4-204ENST00000505331 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-204ENST00000505331 ADGRB2O60241 1585 aa6.95□□□□□ -1.3
CPNE4-204ENST00000505331 EIF2AK4Q9P2K8 1649 aaKnown RBP6.94□□□□□ -1.3
CPNE4-204ENST00000505331 TRIM37O94972 964 aa6.94□□□□□ -1.3
CPNE4-204ENST00000505331 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
CPNE4-204ENST00000505331 PTGER2P43116 358 aa6.94□□□□□ -1.3
CPNE4-204ENST00000505331 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
CPNE4-204ENST00000505331 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
CPNE4-204ENST00000505331 FYCO1Q9BQS8 1478 aa6.93□□□□□ -1.3
CPNE4-204ENST00000505331 BRWD3Q6RI45 1802 aa6.93□□□□□ -1.3
CPNE4-204ENST00000505331 GPR162Q16538 588 aa6.93□□□□□ -1.3
CPNE4-204ENST00000505331 KANK1Q14678 1352 aa6.93□□□□□ -1.3
CPNE4-204ENST00000505331 APLP1P51693 650 aa6.92□□□□□ -1.3
CPNE4-204ENST00000505331 APLP2Q06481 763 aa6.92□□□□□ -1.3
CPNE4-204ENST00000505331 DNAJC5GQ8N7S2 189 aa6.92□□□□□ -1.3
CPNE4-204ENST00000505331 ZNF219Q9P2Y4 722 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-204ENST00000505331 NRKQ7Z2Y5 1582 aa6.91□□□□□ -1.3
CPNE4-204ENST00000505331 ABCB7O75027 752 aa6.91□□□□□ -1.3
CPNE4-204ENST00000505331 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
CPNE4-204ENST00000505331 LRPPRCP42704 1394 aaKnown RBP6.91□□□□□ -1.3
CPNE4-204ENST00000505331 ADGRL2O95490 1459 aa6.91□□□□□ -1.3
CPNE4-204ENST00000505331 CEP152O94986 1710 aa6.9□□□□□ -1.3
CPNE4-204ENST00000505331 HAP1P54257 671 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-204ENST00000505331 GPBP1L1Q9HC44 474 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-204ENST00000505331 AATKQ6ZMQ8 1374 aa6.9□□□□□ -1.31
CPNE4-204ENST00000505331 DLC1Q96QB1 1528 aa6.9□□□□□ -1.31
CPNE4-204ENST00000505331 ARHGEF5Q12774 1597 aa6.9□□□□□ -1.31
CPNE4-204ENST00000505331 FOXO3O43524 673 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-204ENST00000505331 MAP3K5Q99683 1374 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 PXDNQ92626 1479 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 DUOX2Q9NRD8 1548 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 TMEM131LA2VDJ0 1609 aa6.89□□□□□ -1.31
CPNE4-204ENST00000505331 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
CPNE4-204ENST00000505331 CEP162Q5TB80 1403 aa6.88□□□□□ -1.31
CPNE4-204ENST00000505331 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
CPNE4-204ENST00000505331 SPATA31A3Q5VYP0 1347 aa6.88□□□□□ -1.31
CPNE4-204ENST00000505331 XPCQ01831 940 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-204ENST00000505331 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
CPNE4-204ENST00000505331 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
CPNE4-204ENST00000505331 ATP10DQ9P241 1426 aa6.87□□□□□ -1.31
CPNE4-204ENST00000505331 CHGAP10645 457 aaKnown RBP6.87□□□□□ -1.31
CPNE4-204ENST00000505331 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CPNE4-204ENST00000505331 ARXQ96QS3 562 aa6.87□□□□□ -1.31
CPNE4-204ENST00000505331 MTFR1LQ9H019 292 aa6.87□□□□□ -1.31
CPNE4-204ENST00000505331 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
CPNE4-204ENST00000505331 ABCC5O15440 1437 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 METP08581 1390 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 SPATA31A5Q5VU36 1347 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 SPATA31A7Q8IWB4 1347 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 SGIP1Q9BQI5 828 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
CPNE4-204ENST00000505331 XRN1Q8IZH2 1706 aaKnown RBP6.86□□□□□ -1.31
CPNE4-204ENST00000505331 USP32Q8NFA0 1604 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 NEXMIFQ5QGS0 1516 aa6.86□□□□□ -1.31
CPNE4-204ENST00000505331 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
CPNE4-204ENST00000505331 MYOM1P52179 1685 aa6.85□□□□□ -1.31
CPNE4-204ENST00000505331 RREB1Q92766 1687 aa6.85□□□□□ -1.31
CPNE4-204ENST00000505331 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
CPNE4-204ENST00000505331 SAMD1Q6SPF0 538 aaPredicted RBP6.85□□□□□ -1.31
CPNE4-204ENST00000505331 ANO8Q9HCE9 1232 aaPredicted RBP6.85□□□□□ -1.31
CPNE4-204ENST00000505331 BTG4Q9NY30 223 aa6.85□□□□□ -1.31
CPNE4-204ENST00000505331 NUP188Q5SRE5 1749 aa6.84□□□□□ -1.31
CPNE4-204ENST00000505331 PTPN23Q9H3S7 1636 aa6.84□□□□□ -1.31
CPNE4-204ENST00000505331 PELP1Q8IZL8 1130 aaKnown RBP6.84□□□□□ -1.31
CPNE4-204ENST00000505331 KLRG1Q96E93 195 aa6.84□□□□□ -1.31
CPNE4-204ENST00000505331 CHD4Q14839 1912 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms