RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ATG7O95352 703 aa7.32□□□□□ -1.24
NIPBL-204ENST00000504430 NPAS4Q8IUM7 802 aa7.32□□□□□ -1.24
NIPBL-204ENST00000504430 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
NIPBL-204ENST00000504430 ALG2Q9H553 416 aa7.32□□□□□ -1.24
NIPBL-204ENST00000504430 ZC3H6P61129 1189 aaKnown RBP7.31□□□□□ -1.24
NIPBL-204ENST00000504430 TSC1Q92574 1164 aa7.31□□□□□ -1.24
NIPBL-204ENST00000504430 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
NIPBL-204ENST00000504430 PLEKHD1A6NEE1 506 aa7.31□□□□□ -1.24
NIPBL-204ENST00000504430 NAP1L5Q96NT1 182 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-204ENST00000504430 CCER1Q8TC90 406 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-204ENST00000504430 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
NIPBL-204ENST00000504430 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
NIPBL-204ENST00000504430 LRRN4Q8WUT4 740 aa7.3□□□□□ -1.24
NIPBL-204ENST00000504430 LGR5O75473 907 aa7.3□□□□□ -1.24
NIPBL-204ENST00000504430 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
NIPBL-204ENST00000504430 NUTM2BA6NNL0 878 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-204ENST00000504430 NUTM2EB1AL46 878 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-204ENST00000504430 NCLP19338 710 aaKnown RBP7.29□□□□□ -1.24
NIPBL-204ENST00000504430 NUTM2DQ5VT03 806 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-204ENST00000504430 NUTM2AQ8IVF1 878 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-204ENST00000504430 UBXN4Q92575 508 aa7.29□□□□□ -1.24
NIPBL-204ENST00000504430 C7P10643 843 aa7.29□□□□□ -1.24
NIPBL-204ENST00000504430 MICALL2Q8IY33 904 aa7.29□□□□□ -1.24
NIPBL-204ENST00000504430 CNPY4Q8N129 248 aa7.29□□□□□ -1.24
NIPBL-204ENST00000504430 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
NIPBL-204ENST00000504430 HLA-CQ95604 372 aa7.28□□□□□ -1.24
NIPBL-204ENST00000504430 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
NIPBL-204ENST00000504430 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
NIPBL-204ENST00000504430 BACH2Q9BYV9 841 aa7.28□□□□□ -1.24
NIPBL-204ENST00000504430 NDUFB9Q9Y6M9 179 aa7.28□□□□□ -1.24
NIPBL-204ENST00000504430 EVI5O60447 810 aa7.27□□□□□ -1.25
NIPBL-204ENST00000504430 PARNO95453 639 aaKnown RBP7.27□□□□□ -1.25
NIPBL-204ENST00000504430 ANAPC15P60006 121 aa7.27□□□□□ -1.25
NIPBL-204ENST00000504430 APBB1IPQ7Z5R6 666 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-204ENST00000504430 FAM161BQ96MY7 647 aa7.27□□□□□ -1.25
NIPBL-204ENST00000504430 MYH16Q9H6N6 1097 aa7.27□□□□□ -1.25
NIPBL-204ENST00000504430 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-204ENST00000504430 ERCC5P28715 1186 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-204ENST00000504430 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-204ENST00000504430 FAM9BQ8IZU0 186 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 PXYLP1Q8TE99 480 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 IQSEC3Q9UPP2 1182 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-204ENST00000504430 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-204ENST00000504430 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-204ENST00000504430 PADI6Q6TGC4 694 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 C8orf37Q96NL8 207 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 PHF12Q96QT6 1004 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 GUCA2AQ02747 115 aa7.26□□□□□ -1.25
NIPBL-204ENST00000504430 MTMR3Q13615 1198 aa7.25□□□□□ -1.25
NIPBL-204ENST00000504430 NOVA2Q9UNW9 492 aaKnown RBP7.25□□□□□ -1.25
NIPBL-204ENST00000504430 SSFA2P28290 1259 aa7.25□□□□□ -1.25
NIPBL-204ENST00000504430 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
NIPBL-204ENST00000504430 LILRB3O75022 631 aa7.25□□□□□ -1.25
NIPBL-204ENST00000504430 PLCD4Q9BRC7 762 aa7.25□□□□□ -1.25
NIPBL-204ENST00000504430 LNPKQ9C0E8 428 aa7.25□□□□□ -1.25
NIPBL-204ENST00000504430 ABL1P00519 1130 aa7.24□□□□□ -1.25
NIPBL-204ENST00000504430 PTGER2P43116 358 aa7.24□□□□□ -1.25
NIPBL-204ENST00000504430 FAM43BQ6ZT52 329 aaPredicted RBP7.24□□□□□ -1.25
NIPBL-204ENST00000504430 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
NIPBL-204ENST00000504430 RNF19AQ9NV58 838 aa7.24□□□□□ -1.25
NIPBL-204ENST00000504430 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
NIPBL-204ENST00000504430 GABBR1Q9UBS5 961 aa7.23□□□□□ -1.25
NIPBL-204ENST00000504430 EN1Q05925 392 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-204ENST00000504430 LARGE2Q8N3Y3 721 aa7.22□□□□□ -1.25
NIPBL-204ENST00000504430 TANGO6Q9C0B7 1094 aa7.22□□□□□ -1.25
NIPBL-204ENST00000504430 TMEM92Q6UXU6 159 aa7.22□□□□□ -1.25
NIPBL-204ENST00000504430 TMTC2Q8N394 836 aa7.22□□□□□ -1.25
NIPBL-204ENST00000504430 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
NIPBL-204ENST00000504430 SPTLC1O15269 473 aa7.21□□□□□ -1.25
NIPBL-204ENST00000504430 TNNI2P48788 182 aa7.21□□□□□ -1.25
NIPBL-204ENST00000504430 HDLBPQ00341 1268 aaKnown RBP7.21□□□□□ -1.25
NIPBL-204ENST00000504430 GORABQ5T7V8 394 aa7.21□□□□□ -1.25
NIPBL-204ENST00000504430 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.25
NIPBL-204ENST00000504430 PIF1Q9H611 641 aa7.21□□□□□ -1.25
NIPBL-204ENST00000504430 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
NIPBL-204ENST00000504430 WASHC4Q2M389 1173 aa7.21□□□□□ -1.26
NIPBL-204ENST00000504430 FBXO33Q7Z6M2 555 aa7.21□□□□□ -1.26
NIPBL-204ENST00000504430 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 KIF3CO14782 793 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 GAS2L2Q8NHY3 880 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 ARID4AP29374 1257 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-204ENST00000504430 FAM69CQ0P6D2 419 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 HSP90AB4PQ58FF6 505 aa7.2□□□□□ -1.26
NIPBL-204ENST00000504430 ZNF326Q5BKZ1 582 aaKnown RBP7.2□□□□□ -1.26
NIPBL-204ENST00000504430 H3BRB1 525 aa7.19□□□□□ -1.26
NIPBL-204ENST00000504430 SPTY2D1Q68D10 685 aaPredicted RBP7.19□□□□□ -1.26
NIPBL-204ENST00000504430 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
NIPBL-204ENST00000504430 ATP9BO43861 1147 aa7.19□□□□□ -1.26
NIPBL-204ENST00000504430 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
NIPBL-204ENST00000504430 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 L3MBTL3Q96JM7 780 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-204ENST00000504430 SPACA7Q96KW9 195 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 MAFGO15525 162 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 PSME1Q06323 249 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 CCDC144BQ3MJ40 725 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 CAPN12Q6ZSI9 719 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 NUTM1Q86Y26 1132 aa7.18□□□□□ -1.26
NIPBL-204ENST00000504430 PMM1Q92871 262 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms