RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
CDK7-203ENST00000504147 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
CDK7-203ENST00000504147 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
CDK7-203ENST00000504147 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
CDK7-203ENST00000504147 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
CDK7-203ENST00000504147 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
CDK7-203ENST00000504147 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
CDK7-203ENST00000504147 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
CDK7-203ENST00000504147 UBR1Q8IWV7 1749 aa13.88□□□□□ -0.19
CDK7-203ENST00000504147 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
CDK7-203ENST00000504147 CARD14Q9BXL6 1004 aa13.88□□□□□ -0.19
CDK7-203ENST00000504147 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
CDK7-203ENST00000504147 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
CDK7-203ENST00000504147 DLC1Q96QB1 1528 aa13.87□□□□□ -0.19
CDK7-203ENST00000504147 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
CDK7-203ENST00000504147 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK7-203ENST00000504147 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
CDK7-203ENST00000504147 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
CDK7-203ENST00000504147 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
CDK7-203ENST00000504147 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
CDK7-203ENST00000504147 SLIT1O75093 1534 aa13.85□□□□□ -0.19
CDK7-203ENST00000504147 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
CDK7-203ENST00000504147 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
CDK7-203ENST00000504147 TBX22Q9Y458 520 aa13.85□□□□□ -0.19
CDK7-203ENST00000504147 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
CDK7-203ENST00000504147 PLEKHH1Q9ULM0 1364 aa13.84□□□□□ -0.19
CDK7-203ENST00000504147 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
CDK7-203ENST00000504147 ADAMTSL3P82987 1691 aa13.83□□□□□ -0.2
CDK7-203ENST00000504147 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
CDK7-203ENST00000504147 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
CDK7-203ENST00000504147 TECPR2O15040 1411 aa13.82□□□□□ -0.2
CDK7-203ENST00000504147 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
CDK7-203ENST00000504147 MYOM1P52179 1685 aa13.82□□□□□ -0.2
CDK7-203ENST00000504147 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
CDK7-203ENST00000504147 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
CDK7-203ENST00000504147 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
CDK7-203ENST00000504147 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
CDK7-203ENST00000504147 MED14O60244 1454 aa13.81□□□□□ -0.2
CDK7-203ENST00000504147 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
CDK7-203ENST00000504147 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
CDK7-203ENST00000504147 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
CDK7-203ENST00000504147 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
CDK7-203ENST00000504147 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
CDK7-203ENST00000504147 ROBO2Q9HCK4 1378 aa13.79□□□□□ -0.2
CDK7-203ENST00000504147 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
CDK7-203ENST00000504147 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
CDK7-203ENST00000504147 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
CDK7-203ENST00000504147 CEP170BQ9Y4F5 1589 aaPredicted RBP13.78□□□□□ -0.2
CDK7-203ENST00000504147 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
CDK7-203ENST00000504147 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
CDK7-203ENST00000504147 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
CDK7-203ENST00000504147 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
CDK7-203ENST00000504147 CPS1P31327 1500 aa13.74□□□□□ -0.21
CDK7-203ENST00000504147 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
CDK7-203ENST00000504147 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
CDK7-203ENST00000504147 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
CDK7-203ENST00000504147 NSD2O96028 1365 aa13.73□□□□□ -0.21
CDK7-203ENST00000504147 INSRP06213 1382 aa13.72□□□□□ -0.21
CDK7-203ENST00000504147 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
CDK7-203ENST00000504147 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
CDK7-203ENST00000504147 KNDC1Q76NI1 1749 aa13.72□□□□□ -0.21
CDK7-203ENST00000504147 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
CDK7-203ENST00000504147 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
CDK7-203ENST00000504147 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDK7-203ENST00000504147 FYB1O15117 783 aa13.7□□□□□ -0.22
CDK7-203ENST00000504147 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
CDK7-203ENST00000504147 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
CDK7-203ENST00000504147 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
CDK7-203ENST00000504147 KCNA6P17658 529 aa13.69□□□□□ -0.22
CDK7-203ENST00000504147 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
CDK7-203ENST00000504147 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
CDK7-203ENST00000504147 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
CDK7-203ENST00000504147 ATP7BP35670 1465 aa13.68□□□□□ -0.22
CDK7-203ENST00000504147 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
CDK7-203ENST00000504147 ZNF142P52746 1687 aaPredicted RBP13.68□□□□□ -0.22
CDK7-203ENST00000504147 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
CDK7-203ENST00000504147 SENP3-EIF4A1A0A087X0R7 540 aa13.67□□□□□ -0.22
CDK7-203ENST00000504147 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
CDK7-203ENST00000504147 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
CDK7-203ENST00000504147 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
CDK7-203ENST00000504147 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
CDK7-203ENST00000504147 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
CDK7-203ENST00000504147 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
CDK7-203ENST00000504147 MTHFSP49914 203 aa13.66□□□□□ -0.22
CDK7-203ENST00000504147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK7-203ENST00000504147 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
CDK7-203ENST00000504147 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
CDK7-203ENST00000504147 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
CDK7-203ENST00000504147 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
CDK7-203ENST00000504147 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
CDK7-203ENST00000504147 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
CDK7-203ENST00000504147 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
CDK7-203ENST00000504147 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
CDK7-203ENST00000504147 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
CDK7-203ENST00000504147 ACEP12821 1306 aa13.62□□□□□ -0.23
CDK7-203ENST00000504147 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
CDK7-203ENST00000504147 PDE3BQ13370 1112 aa13.61□□□□□ -0.23
CDK7-203ENST00000504147 NME9Q86XW9 330 aa13.61□□□□□ -0.23
CDK7-203ENST00000504147 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
CDK7-203ENST00000504147 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms