RNA–Protein interactions for RNA: ENST00000504105.1

CSNK1A1P3-201, Transcript of casein kinase 1 alpha 1 pseudogene 3, humanhuman

BASIC

Gene CSNK1A1P3, Length 330 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P3-201ENST00000504105 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 BRICD5Q6PL45 260 aa13.41□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 THAP11Q96EK4 314 aa13.41□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1P3-201ENST00000504105 MTMR2Q13614 643 aa13.39□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 C6orf229H3BNL8 230 aa13.38□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 ADH1BP00325 375 aa13.38□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 RNF19BQ6ZMZ0 732 aa13.38□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 SPSB2Q99619 263 aa13.38□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 LILRB3O75022 631 aa13.37□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 PROCA1Q8NCQ7 364 aaPredicted RBP13.37□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 USB1Q9BQ65 265 aaKnown RBP13.37□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 TLL1O43897 1013 aa13.35□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 HRCP23327 699 aa13.35□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 MSS51Q4VC12 460 aa13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 PLA2G2EQ9NZK7 142 aa13.34□□□□□ -0.27
CSNK1A1P3-201ENST00000504105 QPCTQ16769 361 aa13.33□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 PPP2R2DQ66LE6 453 aa13.33□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 SYMPKQ92797 1274 aaKnown RBP13.33□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 SLC6A16Q9GZN6 736 aa13.3□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 FAM160A2Q8N612 972 aaPredicted RBP13.29□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 GGCXP38435 758 aa13.28□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 PRR7Q8TB68 274 aa13.28□□□□□ -0.28
CSNK1A1P3-201ENST00000504105 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 JUNDP17535 347 aa13.25□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 RFC5P40937 340 aa13.25□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 MMP16P51512 607 aa13.25□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 CFAP99D6REC4 459 aa13.24□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 S1PR4O95977 384 aa13.24□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.29
CSNK1A1P3-201ENST00000504105 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 A0A0G2JS52 829 aa13.19□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 TSC1Q92574 1164 aa13.19□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 PTPRNQ16849 979 aa13.18□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 AP1G2O75843 785 aa13.17□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 BANK1Q8NDB2 785 aa13.17□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
CSNK1A1P3-201ENST00000504105 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 SOCS7O14512 581 aa13.09□□□□□ -0.31
CSNK1A1P3-201ENST00000504105 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 KCNH2Q12809 1159 aa13.07□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 APBB1O00213 710 aa13.06□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 FLIIQ13045 1269 aa13.05□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 LRRN4Q8WUT4 740 aa13.05□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 CTHP32929 405 aa13.04□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 RGS20O76081 388 aa13.03□□□□□ -0.32
CSNK1A1P3-201ENST00000504105 RPIAP49247 311 aa13.02□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 MCM6Q14566 821 aa13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 PNMA1Q8ND90 353 aa13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 ARMC2Q8NEN0 867 aa13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 SNRKQ9NRH2 765 aa13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 SLC19A1P41440 591 aa12.98□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 PRM3Q9NNZ6 103 aa12.98□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 NR6A1Q15406 480 aa12.97□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 TRIM32Q13049 653 aa12.96□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.33
CSNK1A1P3-201ENST00000504105 ZC3H4Q9UPT8 1303 aaKnown RBP12.95□□□□□ -0.34
CSNK1A1P3-201ENST00000504105 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms