RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 HLA-CQ95604 372 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 PLEKHG3A1L390 1219 aa6.84□□□□□ -1.31
ATXN3-208ENST00000504047 SPDYE5A6NIY4 337 aa6.84□□□□□ -1.31
ATXN3-208ENST00000504047 MTMR2Q13614 643 aa6.84□□□□□ -1.31
ATXN3-208ENST00000504047 THAP11Q96EK4 314 aa6.84□□□□□ -1.31
ATXN3-208ENST00000504047 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
ATXN3-208ENST00000504047 POLR3EQ9NVU0 708 aa6.84□□□□□ -1.31
ATXN3-208ENST00000504047 TUSC1Q2TAM9 212 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 PRPF38BQ5VTL8 546 aaKnown RBP6.83□□□□□ -1.32
ATXN3-208ENST00000504047 RNF19BQ6ZMZ0 732 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 NKX2-3Q8TAU0 364 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 SLC6A16Q9GZN6 736 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 ZBTB3Q9H5J0 574 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 GOPCQ9HD26 462 aa6.83□□□□□ -1.32
ATXN3-208ENST00000504047 A0A0G2JS52 829 aa6.82□□□□□ -1.32
ATXN3-208ENST00000504047 CSPP1Q1MSJ5 1256 aa6.82□□□□□ -1.32
ATXN3-208ENST00000504047 MSS51Q4VC12 460 aa6.82□□□□□ -1.32
ATXN3-208ENST00000504047 RETREG3Q86VR2 466 aa6.82□□□□□ -1.32
ATXN3-208ENST00000504047 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-208ENST00000504047 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
ATXN3-208ENST00000504047 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-208ENST00000504047 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-208ENST00000504047 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-208ENST00000504047 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
ATXN3-208ENST00000504047 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-208ENST00000504047 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.81□□□□□ -1.32
ATXN3-208ENST00000504047 LIMD1Q9UGP4 676 aa6.81□□□□□ -1.32
ATXN3-208ENST00000504047 PCDHB15Q9Y5E8 787 aa6.81□□□□□ -1.32
ATXN3-208ENST00000504047 S1PR4O95977 384 aa6.8□□□□□ -1.32
ATXN3-208ENST00000504047 SYMPKQ92797 1274 aaKnown RBP6.8□□□□□ -1.32
ATXN3-208ENST00000504047 HRCP23327 699 aa6.79□□□□□ -1.32
ATXN3-208ENST00000504047 FAM160A2Q8N612 972 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-208ENST00000504047 LILRB3O75022 631 aa6.78□□□□□ -1.32
ATXN3-208ENST00000504047 PRR7Q8TB68 274 aa6.78□□□□□ -1.32
ATXN3-208ENST00000504047 RNF223E7ERA6 249 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 JUNDP17535 347 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 DESI1Q6ICB0 168 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 ANKLE1Q8NAG6 615 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 PROCA1Q8NCQ7 364 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-208ENST00000504047 CABLES1Q8TDN4 633 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATXN3-208ENST00000504047 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
ATXN3-208ENST00000504047 RGS20O76081 388 aa6.76□□□□□ -1.33
ATXN3-208ENST00000504047 MMP16P51512 607 aa6.76□□□□□ -1.33
ATXN3-208ENST00000504047 QPCTQ16769 361 aa6.76□□□□□ -1.33
ATXN3-208ENST00000504047 HELBQ8NG08 1087 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-208ENST00000504047 TSC1Q92574 1164 aa6.76□□□□□ -1.33
ATXN3-208ENST00000504047 DXOO77932 396 aaKnown RBP6.75□□□□□ -1.33
ATXN3-208ENST00000504047 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
ATXN3-208ENST00000504047 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-208ENST00000504047 NUDT12Q9BQG2 462 aa6.74□□□□□ -1.33
ATXN3-208ENST00000504047 CFAP99D6REC4 459 aa6.73□□□□□ -1.33
ATXN3-208ENST00000504047 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-208ENST00000504047 PTPRNQ16849 979 aa6.73□□□□□ -1.33
ATXN3-208ENST00000504047 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
ATXN3-208ENST00000504047 RTL5Q5HYW3 569 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-208ENST00000504047 PPP2R2DQ66LE6 453 aa6.73□□□□□ -1.33
ATXN3-208ENST00000504047 CCDC24Q8N4L8 307 aa6.73□□□□□ -1.33
ATXN3-208ENST00000504047 CCNYL3P0C7X3 344 aa6.71□□□□□ -1.34
ATXN3-208ENST00000504047 RFC5P40937 340 aa6.71□□□□□ -1.34
ATXN3-208ENST00000504047 TMEM259Q4ZIN3 620 aa6.71□□□□□ -1.34
ATXN3-208ENST00000504047 LYPD8Q6UX82 237 aa6.71□□□□□ -1.34
ATXN3-208ENST00000504047 AP1G2O75843 785 aa6.7□□□□□ -1.34
ATXN3-208ENST00000504047 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-208ENST00000504047 CD2BP2O95400 341 aaKnown RBP6.69□□□□□ -1.34
ATXN3-208ENST00000504047 CTHP32929 405 aa6.69□□□□□ -1.34
ATXN3-208ENST00000504047 SLC19A1P41440 591 aa6.69□□□□□ -1.34
ATXN3-208ENST00000504047 RPIAP49247 311 aa6.69□□□□□ -1.34
ATXN3-208ENST00000504047 PRKD2Q9BZL6 878 aa6.69□□□□□ -1.34
ATXN3-208ENST00000504047 EVA1BQ9NVM1 165 aa6.69□□□□□ -1.34
ATXN3-208ENST00000504047 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
ATXN3-208ENST00000504047 KCNH2Q12809 1159 aa6.68□□□□□ -1.34
ATXN3-208ENST00000504047 PLA2G2CQ5R387 149 aa6.67□□□□□ -1.34
ATXN3-208ENST00000504047 PER1O15534 1290 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-208ENST00000504047 FBXO31Q5XUX0 539 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-208ENST00000504047 UNC93B1Q9H1C4 597 aa6.66□□□□□ -1.34
ATXN3-208ENST00000504047 APBB1O00213 710 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 F12P00748 615 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-208ENST00000504047 USP17L8P0C7I0 530 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 TRIM32Q13049 653 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 SPRYD7Q5W111 196 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 LIAT1Q6ZQX7 453 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 ZNF598Q86UK7 904 aaKnown RBP6.65□□□□□ -1.34
ATXN3-208ENST00000504047 PNMA1Q8ND90 353 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 BANK1Q8NDB2 785 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 ARMC2Q8NEN0 867 aa6.65□□□□□ -1.34
ATXN3-208ENST00000504047 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
ATXN3-208ENST00000504047 MAP10Q9P2G4 905 aa6.64□□□□□ -1.35
ATXN3-208ENST00000504047 ZNF697Q5TEC3 545 aa6.63□□□□□ -1.35
ATXN3-208ENST00000504047 PTCRAQ6ISU1 281 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-208ENST00000504047 WNT7BP56706 349 aa6.62□□□□□ -1.35
ATXN3-208ENST00000504047 NBPF14Q5TI25 921 aa6.62□□□□□ -1.35
ATXN3-208ENST00000504047 EMID1Q96A84 441 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-208ENST00000504047 GPKOWQ92917 476 aaPredicted RBP eCLIP6.61□□□□□ -1.35
ATXN3-208ENST00000504047 PRM3Q9NNZ6 103 aa6.61□□□□□ -1.35
ATXN3-208ENST00000504047 SOCS7O14512 581 aa6.6□□□□□ -1.35
ATXN3-208ENST00000504047 NR6A1Q15406 480 aa6.6□□□□□ -1.35
ATXN3-208ENST00000504047 BAP1Q92560 729 aa6.6□□□□□ -1.35
ATXN3-208ENST00000504047 AGERQ15109 404 aa6.59□□□□□ -1.35
ATXN3-208ENST00000504047 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms