RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ABCC11Q96J66 1382 aa29.77■■■□□ 2.36
PTPN13-205ENST00000502971 PRAM1Q96QH2 718 aa29.77■■■□□ 2.36
PTPN13-205ENST00000502971 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
PTPN13-205ENST00000502971 TXNDC2Q86VQ3 553 aa29.73■■■□□ 2.35
PTPN13-205ENST00000502971 SAFB2Q14151 953 aaKnown RBP eCLIP29.72■■■□□ 2.35
PTPN13-205ENST00000502971 CARD14Q9BXL6 1004 aa29.72■■■□□ 2.35
PTPN13-205ENST00000502971 PLEKHG1Q9ULL1 1385 aa29.72■■■□□ 2.35
PTPN13-205ENST00000502971 NINLQ9Y2I6 1382 aa29.71■■■□□ 2.35
PTPN13-205ENST00000502971 KNDC1Q76NI1 1749 aa29.7■■■□□ 2.35
PTPN13-205ENST00000502971 LTKP29376 864 aa29.7■■■□□ 2.34
PTPN13-205ENST00000502971 METP08581 1390 aa29.7■■■□□ 2.34
PTPN13-205ENST00000502971 ZBED9Q6R2W3 1325 aa29.69■■■□□ 2.34
PTPN13-205ENST00000502971 SLC12A5Q9H2X9 1139 aa29.69■■■□□ 2.34
PTPN13-205ENST00000502971 SIRT1Q96EB6 747 aa29.68■■■□□ 2.34
PTPN13-205ENST00000502971 ANKLE2Q86XL3 938 aa29.68■■■□□ 2.34
PTPN13-205ENST00000502971 MINK1Q8N4C8 1332 aaPredicted RBP29.67■■■□□ 2.34
PTPN13-205ENST00000502971 ATAD2Q6PL18 1390 aa29.67■■■□□ 2.34
PTPN13-205ENST00000502971 CABP2Q9NPB3 220 aa29.67■■■□□ 2.34
PTPN13-205ENST00000502971 BCANQ96GW7 911 aa29.66■■■□□ 2.34
PTPN13-205ENST00000502971 TECPR2O15040 1411 aa29.66■■■□□ 2.34
PTPN13-205ENST00000502971 ADAMTS13Q76LX8 1427 aa29.65■■■□□ 2.34
PTPN13-205ENST00000502971 ANKRD36BQ8N2N9 1353 aa29.65■■■□□ 2.34
PTPN13-205ENST00000502971 PPP2R1AP30153 589 aa29.65■■■□□ 2.34
PTPN13-205ENST00000502971 SRPK2P78362 688 aaKnown RBP29.65■■■□□ 2.34
PTPN13-205ENST00000502971 FAM135BQ49AJ0 1406 aa29.64■■■□□ 2.34
PTPN13-205ENST00000502971 USP32Q8NFA0 1604 aa29.63■■■□□ 2.33
PTPN13-205ENST00000502971 NSD3Q9BZ95 1437 aa29.63■■■□□ 2.33
PTPN13-205ENST00000502971 INSRP06213 1382 aa29.62■■■□□ 2.33
PTPN13-205ENST00000502971 CPS1P31327 1500 aa29.61■■■□□ 2.33
PTPN13-205ENST00000502971 WAPLQ7Z5K2 1190 aa29.59■■■□□ 2.33
PTPN13-205ENST00000502971 MED14O60244 1454 aa29.59■■■□□ 2.33
PTPN13-205ENST00000502971 PLEKHH1Q9ULM0 1364 aa29.59■■■□□ 2.33
PTPN13-205ENST00000502971 CDK19Q9BWU1 502 aa29.59■■■□□ 2.33
PTPN13-205ENST00000502971 DIP2AQ14689 1571 aa29.57■■■□□ 2.32
PTPN13-205ENST00000502971 LMTK3Q96Q04 1460 aa29.56■■■□□ 2.32
PTPN13-205ENST00000502971 CGNL1Q0VF96 1302 aa29.55■■■□□ 2.32
PTPN13-205ENST00000502971 TBX22Q9Y458 520 aa29.55■■■□□ 2.32
PTPN13-205ENST00000502971 NSD2O96028 1365 aa29.53■■■□□ 2.32
PTPN13-205ENST00000502971 TERF2IPQ9NYB0 399 aa29.52■■■□□ 2.32
PTPN13-205ENST00000502971 A0A1W2PP64 1363 aa29.5■■■□□ 2.31
PTPN13-205ENST00000502971 WASLO00401 505 aaPredicted RBP29.48■■■□□ 2.31
PTPN13-205ENST00000502971 MORC1Q86VD1 984 aa29.48■■■□□ 2.31
PTPN13-205ENST00000502971 NPHP4O75161 1426 aaPredicted RBP29.48■■■□□ 2.31
PTPN13-205ENST00000502971 BLMP54132 1417 aaPredicted RBP29.47■■■□□ 2.31
PTPN13-205ENST00000502971 CD163L1Q9NR16 1453 aa29.47■■■□□ 2.31
PTPN13-205ENST00000502971 PIK3R4Q99570 1358 aa29.46■■■□□ 2.31
PTPN13-205ENST00000502971 ROBO2Q9HCK4 1378 aa29.46■■■□□ 2.31
PTPN13-205ENST00000502971 HDGFL2Q7Z4V5 671 aaPredicted RBP29.46■■■□□ 2.31
PTPN13-205ENST00000502971 SLC26A8Q96RN1 970 aa29.46■■■□□ 2.31
PTPN13-205ENST00000502971 NCKAP5LQ9HCH0 1330 aa29.44■■■□□ 2.3
PTPN13-205ENST00000502971 PTPRUQ92729 1446 aa29.44■■■□□ 2.3
PTPN13-205ENST00000502971 ATP7BP35670 1465 aa29.43■■■□□ 2.3
PTPN13-205ENST00000502971 HSPA2P54652 639 aa29.42■■■□□ 2.3
PTPN13-205ENST00000502971 CABP1Q9NZU7 370 aa29.42■■■□□ 2.3
PTPN13-205ENST00000502971 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.3
PTPN13-205ENST00000502971 ADGRB2O60241 1585 aa29.41■■■□□ 2.3
PTPN13-205ENST00000502971 POLR3AO14802 1390 aaPredicted RBP29.4■■■□□ 2.3
PTPN13-205ENST00000502971 PTCH1Q13635 1447 aa29.39■■■□□ 2.3
PTPN13-205ENST00000502971 AMOTL2Q9Y2J4 779 aa29.39■■■□□ 2.3
PTPN13-205ENST00000502971 ADAMTS8Q9UP79 889 aa29.38■■■□□ 2.29
PTPN13-205ENST00000502971 SMG6Q86US8 1419 aaKnown RBP29.38■■■□□ 2.29
PTPN13-205ENST00000502971 XRN1Q8IZH2 1706 aaKnown RBP29.36■■■□□ 2.29
PTPN13-205ENST00000502971 NEFLP07196 543 aa29.36■■■□□ 2.29
PTPN13-205ENST00000502971 NUDT16Q96DE0 195 aaKnown RBP29.35■■■□□ 2.29
PTPN13-205ENST00000502971 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
PTPN13-205ENST00000502971 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.35■■■□□ 2.29
PTPN13-205ENST00000502971 SUPT16HQ9Y5B9 1047 aaKnown RBP29.34■■■□□ 2.29
PTPN13-205ENST00000502971 CCDC61Q9Y6R9 512 aa29.34■■■□□ 2.29
PTPN13-205ENST00000502971 ANKRD26Q9UPS8 1709 aa29.33■■■□□ 2.29
PTPN13-205ENST00000502971 CPSF1Q10570 1443 aaKnown RBP29.32■■■□□ 2.28
PTPN13-205ENST00000502971 NUDCQ9Y266 331 aa29.31■■■□□ 2.28
PTPN13-205ENST00000502971 FYB1O15117 783 aa29.31■■■□□ 2.28
PTPN13-205ENST00000502971 PDE3BQ13370 1112 aa29.31■■■□□ 2.28
PTPN13-205ENST00000502971 TNNT2P45379 298 aaPredicted RBP29.29■■■□□ 2.28
PTPN13-205ENST00000502971 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
PTPN13-205ENST00000502971 CDC42BPGQ6DT37 1551 aa29.29■■■□□ 2.28
PTPN13-205ENST00000502971 KIF20BQ96Q89 1820 aa29.28■■■□□ 2.28
PTPN13-205ENST00000502971 CFAP53Q96M91 514 aa29.27■■■□□ 2.28
PTPN13-205ENST00000502971 GGNBP2Q9H3C7 697 aa29.27■■■□□ 2.28
PTPN13-205ENST00000502971 EDC4Q6P2E9 1401 aaKnown RBP29.26■■■□□ 2.28
PTPN13-205ENST00000502971 CHD2O14647 1828 aaKnown RBP29.26■■■□□ 2.28
PTPN13-205ENST00000502971 FKBP8Q14318 412 aa29.26■■■□□ 2.27
PTPN13-205ENST00000502971 MTHFSP49914 203 aa29.25■■■□□ 2.27
PTPN13-205ENST00000502971 DMRT2Q9Y5R5 561 aa29.25■■■□□ 2.27
PTPN13-205ENST00000502971 PRR36Q9H6K5 1346 aa29.25■■■□□ 2.27
PTPN13-205ENST00000502971 SENP3-EIF4A1A0A087X0R7 540 aa29.24■■■□□ 2.27
PTPN13-205ENST00000502971 KCNA6P17658 529 aa29.24■■■□□ 2.27
PTPN13-205ENST00000502971 ZNF692Q9BU19 519 aaPredicted RBP29.23■■■□□ 2.27
PTPN13-205ENST00000502971 TOPAZ1Q8N9V7 1692 aa29.22■■■□□ 2.27
PTPN13-205ENST00000502971 AKAP12Q02952 1782 aa29.21■■■□□ 2.27
PTPN13-205ENST00000502971 MON2Q7Z3U7 1717 aa29.21■■■□□ 2.27
PTPN13-205ENST00000502971 SHPRHQ149N8 1683 aa29.21■■■□□ 2.27
PTPN13-205ENST00000502971 SALL2Q9Y467 1007 aaPredicted RBP29.2■■■□□ 2.26
PTPN13-205ENST00000502971 ITSN1Q15811 1721 aa29.2■■■□□ 2.26
PTPN13-205ENST00000502971 NWD1Q149M9 1564 aa29.19■■■□□ 2.26
PTPN13-205ENST00000502971 PLEKHG3A1L390 1219 aa29.19■■■□□ 2.26
PTPN13-205ENST00000502971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.17■■■□□ 2.26
PTPN13-205ENST00000502971 NGEFQ8N5V2 710 aa29.16■■■□□ 2.26
PTPN13-205ENST00000502971 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
PTPN13-205ENST00000502971 CCDC146Q8IYE0 955 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms