RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 SETD1AO15047 1707 aaKnown RBP10.03□□□□□ -0.8
CPNE4-202ENST00000502818 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
CPNE4-202ENST00000502818 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
CPNE4-202ENST00000502818 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.8
CPNE4-202ENST00000502818 ADAMTS13Q76LX8 1427 aa10.02□□□□□ -0.8
CPNE4-202ENST00000502818 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.8
CPNE4-202ENST00000502818 MYOM1P52179 1685 aa10.02□□□□□ -0.81
CPNE4-202ENST00000502818 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.02□□□□□ -0.81
CPNE4-202ENST00000502818 SLC12A5Q9H2X9 1139 aa10.02□□□□□ -0.81
CPNE4-202ENST00000502818 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
CPNE4-202ENST00000502818 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
CPNE4-202ENST00000502818 MRS2Q9HD23 443 aa10□□□□□ -0.81
CPNE4-202ENST00000502818 POGKQ9P215 609 aa10□□□□□ -0.81
CPNE4-202ENST00000502818 ARHGAP23Q9P227 1491 aa10□□□□□ -0.81
CPNE4-202ENST00000502818 LRPPRCP42704 1394 aaKnown RBP10□□□□□ -0.81
CPNE4-202ENST00000502818 TMC1Q8TDI8 760 aa10□□□□□ -0.81
CPNE4-202ENST00000502818 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
CPNE4-202ENST00000502818 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-202ENST00000502818 PLEKHG1Q9ULL1 1385 aa9.99□□□□□ -0.81
CPNE4-202ENST00000502818 CDCA8Q53HL2 280 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 THEMISQ8N1K5 641 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-202ENST00000502818 SLIT1O75093 1534 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
CPNE4-202ENST00000502818 CEP170BQ9Y4F5 1589 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-202ENST00000502818 PARD3Q8TEW0 1356 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 ROBO2Q9HCK4 1378 aa9.98□□□□□ -0.81
CPNE4-202ENST00000502818 CDK19Q9BWU1 502 aa9.97□□□□□ -0.81
CPNE4-202ENST00000502818 EVC2Q86UK5 1308 aa9.97□□□□□ -0.81
CPNE4-202ENST00000502818 NCKAP5LQ9HCH0 1330 aa9.97□□□□□ -0.81
CPNE4-202ENST00000502818 MED14O60244 1454 aa9.97□□□□□ -0.81
CPNE4-202ENST00000502818 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
CPNE4-202ENST00000502818 SRPK2P78362 688 aaKnown RBP9.97□□□□□ -0.81
CPNE4-202ENST00000502818 EID1Q9Y6B2 187 aa9.97□□□□□ -0.81
CPNE4-202ENST00000502818 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.81
CPNE4-202ENST00000502818 KNSTRNQ9Y448 316 aa9.96□□□□□ -0.82
CPNE4-202ENST00000502818 RALBP1Q15311 655 aa9.95□□□□□ -0.82
CPNE4-202ENST00000502818 MYBBP1AQ9BQG0 1328 aaKnown RBP9.95□□□□□ -0.82
CPNE4-202ENST00000502818 DLC1Q96QB1 1528 aa9.94□□□□□ -0.82
CPNE4-202ENST00000502818 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
CPNE4-202ENST00000502818 NSD3Q9BZ95 1437 aa9.94□□□□□ -0.82
CPNE4-202ENST00000502818 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
CPNE4-202ENST00000502818 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
CPNE4-202ENST00000502818 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
CPNE4-202ENST00000502818 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
CPNE4-202ENST00000502818 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
CPNE4-202ENST00000502818 CABP1Q9NZU7 370 aa9.93□□□□□ -0.82
CPNE4-202ENST00000502818 TECPR2O15040 1411 aa9.93□□□□□ -0.82
CPNE4-202ENST00000502818 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
CPNE4-202ENST00000502818 TBX22Q9Y458 520 aa9.92□□□□□ -0.82
CPNE4-202ENST00000502818 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
CPNE4-202ENST00000502818 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
CPNE4-202ENST00000502818 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CPNE4-202ENST00000502818 A0A1W2PP64 1363 aa9.91□□□□□ -0.82
CPNE4-202ENST00000502818 PRR36Q9H6K5 1346 aa9.91□□□□□ -0.82
CPNE4-202ENST00000502818 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-202ENST00000502818 KCNA6P17658 529 aa9.91□□□□□ -0.82
CPNE4-202ENST00000502818 ANKLE2Q86XL3 938 aa9.91□□□□□ -0.82
CPNE4-202ENST00000502818 CPS1P31327 1500 aa9.91□□□□□ -0.82
CPNE4-202ENST00000502818 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-202ENST00000502818 TNNT2P45379 298 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-202ENST00000502818 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
CPNE4-202ENST00000502818 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
CPNE4-202ENST00000502818 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.82
CPNE4-202ENST00000502818 BRD4O60885 1362 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-202ENST00000502818 ANKRD36BQ8N2N9 1353 aa9.9□□□□□ -0.82
CPNE4-202ENST00000502818 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-202ENST00000502818 HSPA2P54652 639 aa9.89□□□□□ -0.83
CPNE4-202ENST00000502818 SIRT1Q96EB6 747 aa9.89□□□□□ -0.83
CPNE4-202ENST00000502818 KNDC1Q76NI1 1749 aa9.89□□□□□ -0.83
CPNE4-202ENST00000502818 SETD1BQ9UPS6 1966 aaKnown RBP9.88□□□□□ -0.83
CPNE4-202ENST00000502818 NUDT16Q96DE0 195 aaKnown RBP9.88□□□□□ -0.83
CPNE4-202ENST00000502818 FBLN1P23142 703 aa9.88□□□□□ -0.83
CPNE4-202ENST00000502818 GGNBP2Q9H3C7 697 aa9.88□□□□□ -0.83
CPNE4-202ENST00000502818 ATAD2Q6PL18 1390 aa9.88□□□□□ -0.83
CPNE4-202ENST00000502818 NPC1L1Q9UHC9 1359 aa9.88□□□□□ -0.83
CPNE4-202ENST00000502818 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
CPNE4-202ENST00000502818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPNE4-202ENST00000502818 FBXO41Q8TF61 875 aa9.86□□□□□ -0.83
CPNE4-202ENST00000502818 FYB1O15117 783 aa9.86□□□□□ -0.83
CPNE4-202ENST00000502818 EVX2Q03828 476 aa9.86□□□□□ -0.83
CPNE4-202ENST00000502818 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
CPNE4-202ENST00000502818 NPHP4O75161 1426 aaPredicted RBP9.86□□□□□ -0.83
CPNE4-202ENST00000502818 PPIP5K1Q6PFW1 1433 aa9.86□□□□□ -0.83
CPNE4-202ENST00000502818 XRN1Q8IZH2 1706 aaKnown RBP9.85□□□□□ -0.83
CPNE4-202ENST00000502818 ATP7BP35670 1465 aa9.85□□□□□ -0.83
CPNE4-202ENST00000502818 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
CPNE4-202ENST00000502818 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
CPNE4-202ENST00000502818 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
CPNE4-202ENST00000502818 DIP2AQ14689 1571 aa9.84□□□□□ -0.83
CPNE4-202ENST00000502818 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
CPNE4-202ENST00000502818 ADAMTS8Q9UP79 889 aa9.84□□□□□ -0.83
CPNE4-202ENST00000502818 ANP32EQ9BTT0 268 aa9.83□□□□□ -0.84
CPNE4-202ENST00000502818 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
CPNE4-202ENST00000502818 NKTRP30414 1462 aaKnown RBP9.83□□□□□ -0.84
CPNE4-202ENST00000502818 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
CPNE4-202ENST00000502818 CAPN15O75808 1086 aa9.83□□□□□ -0.84
CPNE4-202ENST00000502818 HDGFL2Q7Z4V5 671 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-202ENST00000502818 NME9Q86XW9 330 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms