RNA–Protein interactions for RNA: ENST00000502279.2

CHFR-207, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 1,423 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-207ENST00000502279 FBXO41Q8TF61 875 aa19.47■□□□□ 0.71
CHFR-207ENST00000502279 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
CHFR-207ENST00000502279 C19orf44Q9H6X5 657 aa19.46■□□□□ 0.71
CHFR-207ENST00000502279 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
CHFR-207ENST00000502279 TOM1O60784 492 aa19.44■□□□□ 0.7
CHFR-207ENST00000502279 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
CHFR-207ENST00000502279 TRAK1Q9UPV9 953 aa19.43■□□□□ 0.7
CHFR-207ENST00000502279 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
CHFR-207ENST00000502279 MST1RQ04912 1400 aa19.43■□□□□ 0.7
CHFR-207ENST00000502279 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
CHFR-207ENST00000502279 CADPS2Q86UW7 1296 aa19.42■□□□□ 0.7
CHFR-207ENST00000502279 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
CHFR-207ENST00000502279 EIF3AQ14152 1382 aaKnown RBP19.41■□□□□ 0.7
CHFR-207ENST00000502279 NHSL1Q5SYE7 1610 aa19.41■□□□□ 0.7
CHFR-207ENST00000502279 USP32Q8NFA0 1604 aa19.41■□□□□ 0.7
CHFR-207ENST00000502279 ATF3P18847 181 aa19.4■□□□□ 0.7
CHFR-207ENST00000502279 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
CHFR-207ENST00000502279 TOPAZ1Q8N9V7 1692 aa19.39■□□□□ 0.69
CHFR-207ENST00000502279 POGKQ9P215 609 aa19.39■□□□□ 0.69
CHFR-207ENST00000502279 AHDC1Q5TGY3 1603 aaPredicted RBP19.38■□□□□ 0.69
CHFR-207ENST00000502279 TULP4Q9NRJ4 1543 aa19.37■□□□□ 0.69
CHFR-207ENST00000502279 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
CHFR-207ENST00000502279 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
CHFR-207ENST00000502279 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
CHFR-207ENST00000502279 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
CHFR-207ENST00000502279 SLAIN2Q9P270 581 aa19.35■□□□□ 0.69
CHFR-207ENST00000502279 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
CHFR-207ENST00000502279 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHFR-207ENST00000502279 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
CHFR-207ENST00000502279 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.68
CHFR-207ENST00000502279 PIP4K2BP78356 416 aa19.32■□□□□ 0.68
CHFR-207ENST00000502279 ATP7BP35670 1465 aa19.31■□□□□ 0.68
CHFR-207ENST00000502279 MINK1Q8N4C8 1332 aaPredicted RBP19.31■□□□□ 0.68
CHFR-207ENST00000502279 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
CHFR-207ENST00000502279 USP47Q96K76 1375 aa19.3■□□□□ 0.68
CHFR-207ENST00000502279 ILDR1Q86SU0 546 aaPredicted RBP19.29■□□□□ 0.68
CHFR-207ENST00000502279 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
CHFR-207ENST00000502279 BRINP3Q76B58 766 aa19.27■□□□□ 0.68
CHFR-207ENST00000502279 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
CHFR-207ENST00000502279 SHPRHQ149N8 1683 aa19.25■□□□□ 0.67
CHFR-207ENST00000502279 AKAP12Q02952 1782 aa19.23■□□□□ 0.67
CHFR-207ENST00000502279 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
CHFR-207ENST00000502279 PRR36Q9H6K5 1346 aa19.22■□□□□ 0.67
CHFR-207ENST00000502279 PXDNQ92626 1479 aa19.21■□□□□ 0.67
CHFR-207ENST00000502279 ORAI2Q96SN7 254 aa19.21■□□□□ 0.67
CHFR-207ENST00000502279 EVC2Q86UK5 1308 aa19.21■□□□□ 0.67
CHFR-207ENST00000502279 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
CHFR-207ENST00000502279 HSPA1LP34931 641 aa19.2■□□□□ 0.66
CHFR-207ENST00000502279 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
CHFR-207ENST00000502279 TESK2Q96S53 571 aa19.19■□□□□ 0.66
CHFR-207ENST00000502279 CDK19Q9BWU1 502 aa19.19■□□□□ 0.66
CHFR-207ENST00000502279 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
CHFR-207ENST00000502279 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
CHFR-207ENST00000502279 MYOM1P52179 1685 aa19.18■□□□□ 0.66
CHFR-207ENST00000502279 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
CHFR-207ENST00000502279 NPHP3Q7Z494 1330 aa19.17■□□□□ 0.66
CHFR-207ENST00000502279 ALS2Q96Q42 1657 aa19.17■□□□□ 0.66
CHFR-207ENST00000502279 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
CHFR-207ENST00000502279 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
CHFR-207ENST00000502279 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
CHFR-207ENST00000502279 NRKQ7Z2Y5 1582 aa19.16■□□□□ 0.66
CHFR-207ENST00000502279 PPIP5K1Q6PFW1 1433 aa19.16■□□□□ 0.66
CHFR-207ENST00000502279 SRPK2P78362 688 aaKnown RBP19.16■□□□□ 0.66
CHFR-207ENST00000502279 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
CHFR-207ENST00000502279 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
CHFR-207ENST00000502279 ABCA3Q99758 1704 aa19.15■□□□□ 0.66
CHFR-207ENST00000502279 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.65
CHFR-207ENST00000502279 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
CHFR-207ENST00000502279 EIF4G2P78344 907 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHFR-207ENST00000502279 CABP2Q9NPB3 220 aa19.13■□□□□ 0.65
CHFR-207ENST00000502279 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
CHFR-207ENST00000502279 CRYBG1Q9Y4K1 1723 aa19.12■□□□□ 0.65
CHFR-207ENST00000502279 PUS7Q96PZ0 661 aaKnown RBP19.11■□□□□ 0.65
CHFR-207ENST00000502279 JCADQ9P266 1359 aa19.11■□□□□ 0.65
CHFR-207ENST00000502279 MARF1Q9Y4F3 1742 aaKnown RBP19.11■□□□□ 0.65
CHFR-207ENST00000502279 FOXO3O43524 673 aa19.1■□□□□ 0.65
CHFR-207ENST00000502279 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
CHFR-207ENST00000502279 PLEKHG3A1L390 1219 aa19.09■□□□□ 0.65
CHFR-207ENST00000502279 TNS3Q68CZ2 1445 aa19.09■□□□□ 0.65
CHFR-207ENST00000502279 NINLQ9Y2I6 1382 aa19.09■□□□□ 0.65
CHFR-207ENST00000502279 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
CHFR-207ENST00000502279 TMF1P82094 1093 aa19.08■□□□□ 0.65
CHFR-207ENST00000502279 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.65
CHFR-207ENST00000502279 SBNO1A3KN83 1393 aa19.08■□□□□ 0.65
CHFR-207ENST00000502279 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.64
CHFR-207ENST00000502279 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
CHFR-207ENST00000502279 LRRC59Q96AG4 307 aaKnown RBP19.07■□□□□ 0.64
CHFR-207ENST00000502279 CD163L1Q9NR16 1453 aa19.06■□□□□ 0.64
CHFR-207ENST00000502279 USP54Q70EL1 1684 aa19.06■□□□□ 0.64
CHFR-207ENST00000502279 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
CHFR-207ENST00000502279 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
CHFR-207ENST00000502279 ACEP12821 1306 aa19.05■□□□□ 0.64
CHFR-207ENST00000502279 USP6P35125 1406 aa19.05■□□□□ 0.64
CHFR-207ENST00000502279 CPSF1Q10570 1443 aaKnown RBP19.05■□□□□ 0.64
CHFR-207ENST00000502279 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
CHFR-207ENST00000502279 BRD4O60885 1362 aaPredicted RBP19.04■□□□□ 0.64
CHFR-207ENST00000502279 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
CHFR-207ENST00000502279 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
CHFR-207ENST00000502279 PSME1Q06323 249 aa19.03■□□□□ 0.64
CHFR-207ENST00000502279 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms