RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
PLXND1-202ENST00000501038 CABP2Q9NPB3 220 aa24.94■■□□□ 1.58
PLXND1-202ENST00000501038 ABCC11Q96J66 1382 aa24.93■■□□□ 1.58
PLXND1-202ENST00000501038 BLMP54132 1417 aaPredicted RBP24.93■■□□□ 1.58
PLXND1-202ENST00000501038 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
PLXND1-202ENST00000501038 FKBP8Q14318 412 aa24.93■■□□□ 1.58
PLXND1-202ENST00000501038 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
PLXND1-202ENST00000501038 MINK1Q8N4C8 1332 aaPredicted RBP24.92■■□□□ 1.58
PLXND1-202ENST00000501038 SMG6Q86US8 1419 aaKnown RBP24.91■■□□□ 1.58
PLXND1-202ENST00000501038 ATAD2Q6PL18 1390 aa24.91■■□□□ 1.58
PLXND1-202ENST00000501038 SRPK2P78362 688 aaKnown RBP24.89■■□□□ 1.57
PLXND1-202ENST00000501038 METP08581 1390 aa24.88■■□□□ 1.57
PLXND1-202ENST00000501038 CPS1P31327 1500 aa24.86■■□□□ 1.57
PLXND1-202ENST00000501038 SLIT1O75093 1534 aa24.86■■□□□ 1.57
PLXND1-202ENST00000501038 PLEKHG1Q9ULL1 1385 aa24.85■■□□□ 1.57
PLXND1-202ENST00000501038 TECPR2O15040 1411 aa24.85■■□□□ 1.57
PLXND1-202ENST00000501038 PLEKHH1Q9ULM0 1364 aa24.85■■□□□ 1.57
PLXND1-202ENST00000501038 ARHGAP23Q9P227 1491 aa24.84■■□□□ 1.57
PLXND1-202ENST00000501038 NUDCQ9Y266 331 aa24.84■■□□□ 1.57
PLXND1-202ENST00000501038 CGNL1Q0VF96 1302 aa24.84■■□□□ 1.57
PLXND1-202ENST00000501038 NSD2O96028 1365 aa24.84■■□□□ 1.57
PLXND1-202ENST00000501038 ADAMTS13Q76LX8 1427 aa24.84■■□□□ 1.57
PLXND1-202ENST00000501038 SIRT1Q96EB6 747 aa24.83■■□□□ 1.57
PLXND1-202ENST00000501038 CDK19Q9BWU1 502 aa24.83■■□□□ 1.57
PLXND1-202ENST00000501038 FAM135BQ49AJ0 1406 aa24.83■■□□□ 1.57
PLXND1-202ENST00000501038 RIMS1Q86UR5 1692 aaKnown RBP24.83■■□□□ 1.57
PLXND1-202ENST00000501038 WDR43Q15061 677 aaKnown RBP eCLIP24.83■■□□□ 1.56
PLXND1-202ENST00000501038 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
PLXND1-202ENST00000501038 MORC1Q86VD1 984 aa24.82■■□□□ 1.56
PLXND1-202ENST00000501038 BCANQ96GW7 911 aa24.82■■□□□ 1.56
PLXND1-202ENST00000501038 A0A1W2PP64 1363 aa24.81■■□□□ 1.56
PLXND1-202ENST00000501038 SENP3-EIF4A1A0A087X0R7 540 aa24.8■■□□□ 1.56
PLXND1-202ENST00000501038 ADAMTS8Q9UP79 889 aa24.8■■□□□ 1.56
PLXND1-202ENST00000501038 ANKRD26Q9UPS8 1709 aa24.8■■□□□ 1.56
PLXND1-202ENST00000501038 LTKP29376 864 aa24.79■■□□□ 1.56
PLXND1-202ENST00000501038 CD163L1Q9NR16 1453 aa24.79■■□□□ 1.56
PLXND1-202ENST00000501038 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
PLXND1-202ENST00000501038 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
PLXND1-202ENST00000501038 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
PLXND1-202ENST00000501038 EID1Q9Y6B2 187 aa24.78■■□□□ 1.56
PLXND1-202ENST00000501038 MED14O60244 1454 aa24.78■■□□□ 1.56
PLXND1-202ENST00000501038 POLR3AO14802 1390 aaPredicted RBP24.77■■□□□ 1.56
PLXND1-202ENST00000501038 PDE3BQ13370 1112 aa24.76■■□□□ 1.55
PLXND1-202ENST00000501038 ADAMTSL3P82987 1691 aa24.76■■□□□ 1.55
PLXND1-202ENST00000501038 KIF20BQ96Q89 1820 aa24.74■■□□□ 1.55
PLXND1-202ENST00000501038 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
PLXND1-202ENST00000501038 ATP7BP35670 1465 aa24.73■■□□□ 1.55
PLXND1-202ENST00000501038 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
PLXND1-202ENST00000501038 HDGFL2Q7Z4V5 671 aaPredicted RBP24.73■■□□□ 1.55
PLXND1-202ENST00000501038 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
PLXND1-202ENST00000501038 CEP170BQ9Y4F5 1589 aaPredicted RBP24.73■■□□□ 1.55
PLXND1-202ENST00000501038 WASLO00401 505 aaPredicted RBP24.72■■□□□ 1.55
PLXND1-202ENST00000501038 SALL2Q9Y467 1007 aaPredicted RBP24.71■■□□□ 1.55
PLXND1-202ENST00000501038 ADGRB2O60241 1585 aa24.7■■□□□ 1.54
PLXND1-202ENST00000501038 CABP1Q9NZU7 370 aa24.7■■□□□ 1.54
PLXND1-202ENST00000501038 ROBO2Q9HCK4 1378 aa24.69■■□□□ 1.54
PLXND1-202ENST00000501038 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
PLXND1-202ENST00000501038 ZNF142P52746 1687 aaPredicted RBP24.68■■□□□ 1.54
PLXND1-202ENST00000501038 TNNT2P45379 298 aaPredicted RBP24.68■■□□□ 1.54
PLXND1-202ENST00000501038 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.68■■□□□ 1.54
PLXND1-202ENST00000501038 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
PLXND1-202ENST00000501038 IRX6P78412 446 aaPredicted RBP24.66■■□□□ 1.54
PLXND1-202ENST00000501038 TBX22Q9Y458 520 aa24.66■■□□□ 1.54
PLXND1-202ENST00000501038 RNF123Q5XPI4 1314 aa24.65■■□□□ 1.54
PLXND1-202ENST00000501038 ITSN1Q15811 1721 aa24.64■■□□□ 1.54
PLXND1-202ENST00000501038 PPIP5K1Q6PFW1 1433 aa24.64■■□□□ 1.54
PLXND1-202ENST00000501038 AKAP12Q02952 1782 aa24.64■■□□□ 1.54
PLXND1-202ENST00000501038 CDC42BPGQ6DT37 1551 aa24.64■■□□□ 1.53
PLXND1-202ENST00000501038 CFAP53Q96M91 514 aa24.64■■□□□ 1.53
PLXND1-202ENST00000501038 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.53
PLXND1-202ENST00000501038 FYB1O15117 783 aa24.63■■□□□ 1.53
PLXND1-202ENST00000501038 MTHFSP49914 203 aa24.63■■□□□ 1.53
PLXND1-202ENST00000501038 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
PLXND1-202ENST00000501038 MON2Q7Z3U7 1717 aa24.62■■□□□ 1.53
PLXND1-202ENST00000501038 GGNBP2Q9H3C7 697 aa24.62■■□□□ 1.53
PLXND1-202ENST00000501038 CPSF1Q10570 1443 aaKnown RBP24.61■■□□□ 1.53
PLXND1-202ENST00000501038 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
PLXND1-202ENST00000501038 NUDT16Q96DE0 195 aaKnown RBP24.61■■□□□ 1.53
PLXND1-202ENST00000501038 TOPAZ1Q8N9V7 1692 aa24.6■■□□□ 1.53
PLXND1-202ENST00000501038 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
PLXND1-202ENST00000501038 PTCH1Q13635 1447 aa24.59■■□□□ 1.53
PLXND1-202ENST00000501038 CDCA7LQ96GN5 454 aa24.59■■□□□ 1.53
PLXND1-202ENST00000501038 SETD1BQ9UPS6 1966 aaKnown RBP24.59■■□□□ 1.53
PLXND1-202ENST00000501038 EDC4Q6P2E9 1401 aaKnown RBP24.58■■□□□ 1.53
PLXND1-202ENST00000501038 ZNF521Q96K83 1311 aa24.58■■□□□ 1.52
PLXND1-202ENST00000501038 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
PLXND1-202ENST00000501038 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
PLXND1-202ENST00000501038 NGEFQ8N5V2 710 aa24.56■■□□□ 1.52
PLXND1-202ENST00000501038 PRR36Q9H6K5 1346 aa24.55■■□□□ 1.52
PLXND1-202ENST00000501038 APAF1O14727 1248 aa24.54■■□□□ 1.52
PLXND1-202ENST00000501038 RCAN3Q9UKA8 241 aa24.53■■□□□ 1.52
PLXND1-202ENST00000501038 PIK3R4Q99570 1358 aa24.53■■□□□ 1.52
PLXND1-202ENST00000501038 COL3A1P02461 1466 aaPredicted RBP24.53■■□□□ 1.52
PLXND1-202ENST00000501038 PPP4R2Q9NY27 417 aa24.53■■□□□ 1.52
PLXND1-202ENST00000501038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
PLXND1-202ENST00000501038 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
PLXND1-202ENST00000501038 NCKAP5LQ9HCH0 1330 aa24.5■■□□□ 1.51
PLXND1-202ENST00000501038 IQSEC2Q5JU85 1478 aa24.5■■□□□ 1.51
PLXND1-202ENST00000501038 RUNDC1Q96C34 613 aa24.5■■□□□ 1.51
PLXND1-202ENST00000501038 ANKLE2Q86XL3 938 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms