RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
PUM1-212ENST00000498627 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
PUM1-212ENST00000498627 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
PUM1-212ENST00000498627 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
PUM1-212ENST00000498627 METP08581 1390 aa11.7□□□□□ -0.54
PUM1-212ENST00000498627 IFT172Q9UG01 1749 aa11.7□□□□□ -0.54
PUM1-212ENST00000498627 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
PUM1-212ENST00000498627 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
PUM1-212ENST00000498627 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
PUM1-212ENST00000498627 NRXN3Q9Y4C0 1643 aa11.7□□□□□ -0.54
PUM1-212ENST00000498627 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
PUM1-212ENST00000498627 STK26Q9P289 416 aa11.69□□□□□ -0.54
PUM1-212ENST00000498627 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
PUM1-212ENST00000498627 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
PUM1-212ENST00000498627 TONSLQ96HA7 1378 aa11.68□□□□□ -0.54
PUM1-212ENST00000498627 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
PUM1-212ENST00000498627 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
PUM1-212ENST00000498627 C14orf93Q9H972 538 aaKnown RBP11.68□□□□□ -0.54
PUM1-212ENST00000498627 AMOTL2Q9Y2J4 779 aa11.68□□□□□ -0.54
PUM1-212ENST00000498627 LRRC7Q96NW7 1537 aa11.68□□□□□ -0.54
PUM1-212ENST00000498627 SETBP1Q9Y6X0 1596 aa11.67□□□□□ -0.54
PUM1-212ENST00000498627 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
PUM1-212ENST00000498627 KCNA6P17658 529 aa11.67□□□□□ -0.54
PUM1-212ENST00000498627 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
PUM1-212ENST00000498627 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
PUM1-212ENST00000498627 MYOM2P54296 1465 aa11.66□□□□□ -0.54
PUM1-212ENST00000498627 NRXN1Q9ULB1 1477 aa11.66□□□□□ -0.54
PUM1-212ENST00000498627 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
PUM1-212ENST00000498627 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
PUM1-212ENST00000498627 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
PUM1-212ENST00000498627 PRAG1Q86YV5 1406 aa11.64□□□□□ -0.55
PUM1-212ENST00000498627 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
PUM1-212ENST00000498627 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
PUM1-212ENST00000498627 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
PUM1-212ENST00000498627 CHD2O14647 1828 aaKnown RBP11.63□□□□□ -0.55
PUM1-212ENST00000498627 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
PUM1-212ENST00000498627 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
PUM1-212ENST00000498627 ASXL1Q8IXJ9 1541 aa11.63□□□□□ -0.55
PUM1-212ENST00000498627 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
PUM1-212ENST00000498627 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
PUM1-212ENST00000498627 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
PUM1-212ENST00000498627 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
PUM1-212ENST00000498627 SAFB2Q14151 953 aaKnown RBP eCLIP11.61□□□□□ -0.55
PUM1-212ENST00000498627 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
PUM1-212ENST00000498627 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
PUM1-212ENST00000498627 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
PUM1-212ENST00000498627 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
PUM1-212ENST00000498627 ROBO2Q9HCK4 1378 aa11.61□□□□□ -0.55
PUM1-212ENST00000498627 YTHDC2Q9H6S0 1430 aaKnown RBP11.6□□□□□ -0.55
PUM1-212ENST00000498627 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
PUM1-212ENST00000498627 PLEKHH1Q9ULM0 1364 aa11.59□□□□□ -0.55
PUM1-212ENST00000498627 C14orf37Q86TY3 774 aa11.59□□□□□ -0.55
PUM1-212ENST00000498627 ADGRB1O14514 1584 aa11.58□□□□□ -0.55
PUM1-212ENST00000498627 NWD1Q149M9 1564 aa11.58□□□□□ -0.55
PUM1-212ENST00000498627 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
PUM1-212ENST00000498627 JCADQ9P266 1359 aa11.57□□□□□ -0.56
PUM1-212ENST00000498627 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
PUM1-212ENST00000498627 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
PUM1-212ENST00000498627 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
PUM1-212ENST00000498627 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
PUM1-212ENST00000498627 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
PUM1-212ENST00000498627 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
PUM1-212ENST00000498627 XIRP1Q702N8 1843 aaKnown RBP11.56□□□□□ -0.56
PUM1-212ENST00000498627 POGKQ9P215 609 aa11.56□□□□□ -0.56
PUM1-212ENST00000498627 CDK12Q9NYV4 1490 aaPredicted RBP11.56□□□□□ -0.56
PUM1-212ENST00000498627 CARD11Q9BXL7 1154 aa11.55□□□□□ -0.56
PUM1-212ENST00000498627 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
PUM1-212ENST00000498627 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
PUM1-212ENST00000498627 SPATA31A6Q5VVP1 1343 aa11.55□□□□□ -0.56
PUM1-212ENST00000498627 LAMC1P11047 1609 aa11.54□□□□□ -0.56
PUM1-212ENST00000498627 HIRIP3Q9BW71 556 aaPredicted RBP11.54□□□□□ -0.56
PUM1-212ENST00000498627 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
PUM1-212ENST00000498627 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
PUM1-212ENST00000498627 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
PUM1-212ENST00000498627 TECPR2O15040 1411 aa11.52□□□□□ -0.56
PUM1-212ENST00000498627 PTCH1Q13635 1447 aa11.52□□□□□ -0.56
PUM1-212ENST00000498627 RXRBP28702 533 aa11.52□□□□□ -0.57
PUM1-212ENST00000498627 SIRT1Q96EB6 747 aa11.52□□□□□ -0.57
PUM1-212ENST00000498627 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
PUM1-212ENST00000498627 RALGAPBQ86X10 1494 aa11.51□□□□□ -0.57
PUM1-212ENST00000498627 NUBP1P53384 320 aa11.51□□□□□ -0.57
PUM1-212ENST00000498627 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.51□□□□□ -0.57
PUM1-212ENST00000498627 MSH6P52701 1360 aa11.51□□□□□ -0.57
PUM1-212ENST00000498627 ATF3P18847 181 aa11.5□□□□□ -0.57
PUM1-212ENST00000498627 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
PUM1-212ENST00000498627 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
PUM1-212ENST00000498627 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
PUM1-212ENST00000498627 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
PUM1-212ENST00000498627 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
PUM1-212ENST00000498627 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
PUM1-212ENST00000498627 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
PUM1-212ENST00000498627 DLC1Q96QB1 1528 aa11.49□□□□□ -0.57
PUM1-212ENST00000498627 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
PUM1-212ENST00000498627 SLAIN2Q9P270 581 aa11.48□□□□□ -0.57
PUM1-212ENST00000498627 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
PUM1-212ENST00000498627 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
PUM1-212ENST00000498627 NALCNQ8IZF0 1738 aa11.48□□□□□ -0.57
PUM1-212ENST00000498627 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
PUM1-212ENST00000498627 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
PUM1-212ENST00000498627 ORAI2Q96SN7 254 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms