RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ESF1Q9H501 851 aaKnown RBP2.08□□□□□ -2.08
XRN1-214ENST00000498077 CHMP4BP1P59074 171 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 TYW1BQ6NUM6 668 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 ANKK1Q8NFD2 765 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 P2RX7Q99572 595 aaKnown RBP2.08□□□□□ -2.08
XRN1-214ENST00000498077 EPC1Q9H2F5 836 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 ARHGEF40Q8TER5 1519 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 EZRP15311 586 aaKnown RBP2.07□□□□□ -2.08
XRN1-214ENST00000498077 NF2P35240 595 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 AGERQ15109 404 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 SPRYD3Q8NCJ5 442 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 WDR90Q96KV7 1748 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 AHDC1Q5TGY3 1603 aaPredicted RBP2.07□□□□□ -2.08
XRN1-214ENST00000498077 XPAP23025 273 aaPredicted RBP2.07□□□□□ -2.08
XRN1-214ENST00000498077 NBPF14Q5TI25 921 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 SLC17A8Q8NDX2 589 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 PRM3Q9NNZ6 103 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 PRDM6Q9NQX0 595 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 TOPBP1Q92547 1522 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 CCDC88BA6NC98 1476 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 MRPL50Q8N5N7 158 aaKnown RBP2.07□□□□□ -2.08
XRN1-214ENST00000498077 SPIRE2Q8WWL2 714 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 PHF8Q9UPP1 1060 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 PCDHGA4Q9Y5G9 962 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 ADCY10Q96PN6 1610 aa2.07□□□□□ -2.08
XRN1-214ENST00000498077 P3H3Q8IVL6 736 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 RUNDC1Q96C34 613 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 PCDHA6Q9UN73 950 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 PARD3Q8TEW0 1356 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 DLC1Q96QB1 1528 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 ADAMTS7Q9UKP4 1686 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 ALKQ9UM73 1620 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 ST18O60284 1047 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 HIRIP3Q9BW71 556 aaPredicted RBP2.06□□□□□ -2.08
XRN1-214ENST00000498077 DDX27Q96GQ7 796 aaKnown RBP2.06□□□□□ -2.08
XRN1-214ENST00000498077 HS3ST6Q96QI5 342 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 GRIN2BQ13224 1484 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 PRDM16Q9HAZ2 1276 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 KMT5BQ4FZB7 885 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 TOR2AQ5JU69 321 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 LCE2DQ5TA82 110 aaPredicted RBP2.06□□□□□ -2.08
XRN1-214ENST00000498077 SLC4A5Q9BY07 1137 aa2.06□□□□□ -2.08
XRN1-214ENST00000498077 GRIPAP1Q4V328 841 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 PPP1R14AQ96A00 147 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 KIF7Q2M1P5 1343 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 AKNAQ7Z591 1439 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 UHRF1BP1LA0JNW5 1464 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 SHPRHQ149N8 1683 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 SHANK2Q9UPX8 1470 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 NEFMP07197 916 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 PIP4K2BP78356 416 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 VARS2Q5ST30 1063 aaKnown RBP2.05□□□□□ -2.08
XRN1-214ENST00000498077 RAB12Q6IQ22 244 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 PLPP6Q8IY26 295 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 NPATQ14207 1427 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 PBRM1Q86U86 1689 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 ARID5BQ14865 1188 aa2.05□□□□□ -2.08
XRN1-214ENST00000498077 ZNF142P52746 1687 aaPredicted RBP2.05□□□□□ -2.08
XRN1-214ENST00000498077 EFCAB5A4FU69 1503 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 RNF20Q5VTR2 975 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 DUSP27Q5VZP5 1158 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 ZDHHC16Q969W1 377 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 COLQQ9Y215 455 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 ABCA8O94911 1581 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 KDM5DQ9BY66 1539 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 ARHGEF12Q9NZN5 1544 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 DIP2AQ14689 1571 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 PPP1R15BQ5SWA1 713 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 PNMA1Q8ND90 353 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 MAGI2Q86UL8 1455 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 NUP160Q12769 1436 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 PHF14O94880 888 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 DDX46Q7L014 1031 aaKnown RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 PDCL3Q9H2J4 239 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 MAP3K5Q99683 1374 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 CSPP1Q1MSJ5 1256 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 ARSIQ5FYB1 569 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 DNAJC5GQ8N7S2 189 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 ZNF454Q8N9F8 522 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 PICK1Q9NRD5 415 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 NUTM2BA6NNL0 878 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 NUTM2EB1AL46 878 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 PPP4CP60510 307 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 MEX3CQ5U5Q3 659 aaKnown RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 NUTM2DQ5VT03 806 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 NUTM2AQ8IVF1 878 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 GPHNQ9NQX3 736 aaPredicted RBP2.04□□□□□ -2.08
XRN1-214ENST00000498077 PCDHA13Q9Y5I0 950 aa2.04□□□□□ -2.08
XRN1-214ENST00000498077 SLF2Q8IX21 1173 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 WNT2BQ93097 391 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 ARID1AO14497 2285 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 DNMBPQ6XZF7 1577 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 LBX1P52954 281 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 PIK3R5Q8WYR1 880 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 PLA2G2EQ9NZK7 142 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 CNTLNQ9NXG0 1405 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 ADGRB2O60241 1585 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 SHANK3Q9BYB0 1731 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 NBPF15Q8N660 670 aa2.03□□□□□ -2.08
XRN1-214ENST00000498077 ABHD8Q96I13 439 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms