RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
GPATCH4-208ENST00000497287 ANP32CO43423 234 aa10.06□□□□□ -0.8
GPATCH4-208ENST00000497287 PTPRUQ92729 1446 aa10.06□□□□□ -0.8
GPATCH4-208ENST00000497287 STRCQ7RTU9 1775 aa10.05□□□□□ -0.8
GPATCH4-208ENST00000497287 PTCH1Q13635 1447 aa10.05□□□□□ -0.8
GPATCH4-208ENST00000497287 ROBO2Q9HCK4 1378 aa10.04□□□□□ -0.8
GPATCH4-208ENST00000497287 PLEKHH1Q9ULM0 1364 aa10.04□□□□□ -0.8
GPATCH4-208ENST00000497287 SRPK2P78362 688 aaKnown RBP10.04□□□□□ -0.8
GPATCH4-208ENST00000497287 MIER1Q8N108 512 aa10.04□□□□□ -0.8
GPATCH4-208ENST00000497287 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 TULP4Q9NRJ4 1543 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 KCNA6P17658 529 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 CDK19Q9BWU1 502 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 PANK3Q9H999 370 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 CHD2O14647 1828 aaKnown RBP10.03□□□□□ -0.8
GPATCH4-208ENST00000497287 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.8
GPATCH4-208ENST00000497287 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
GPATCH4-208ENST00000497287 TMC1Q8TDI8 760 aa10.02□□□□□ -0.81
GPATCH4-208ENST00000497287 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
GPATCH4-208ENST00000497287 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
GPATCH4-208ENST00000497287 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
GPATCH4-208ENST00000497287 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
GPATCH4-208ENST00000497287 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
GPATCH4-208ENST00000497287 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
GPATCH4-208ENST00000497287 ADGRB2O60241 1585 aa9.99□□□□□ -0.81
GPATCH4-208ENST00000497287 MYOM1P52179 1685 aa9.99□□□□□ -0.81
GPATCH4-208ENST00000497287 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
GPATCH4-208ENST00000497287 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
GPATCH4-208ENST00000497287 CCER2I3L3R5 266 aa9.98□□□□□ -0.81
GPATCH4-208ENST00000497287 NUDT16Q96DE0 195 aaKnown RBP9.98□□□□□ -0.81
GPATCH4-208ENST00000497287 PRKRIP1Q9H875 184 aaPredicted RBP9.98□□□□□ -0.81
GPATCH4-208ENST00000497287 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
GPATCH4-208ENST00000497287 RALBP1Q15311 655 aa9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 HDGFL2Q7Z4V5 671 aaPredicted RBP9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 NKTRP30414 1462 aaKnown RBP9.97□□□□□ -0.81
GPATCH4-208ENST00000497287 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
GPATCH4-208ENST00000497287 C14orf37Q86TY3 774 aa9.95□□□□□ -0.82
GPATCH4-208ENST00000497287 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
GPATCH4-208ENST00000497287 ATP7BP35670 1465 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 PPIP5K1Q6PFW1 1433 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 NSD3Q9BZ95 1437 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 ADGRL3Q9HAR2 1447 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 CNGB1Q14028 1251 aaPredicted RBP9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 AMER1Q5JTC6 1135 aaPredicted RBP9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
GPATCH4-208ENST00000497287 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 A0A1W2PP64 1363 aa9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
GPATCH4-208ENST00000497287 PARD3Q8TEW0 1356 aa9.92□□□□□ -0.82
GPATCH4-208ENST00000497287 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
GPATCH4-208ENST00000497287 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
GPATCH4-208ENST00000497287 C19orf44Q9H6X5 657 aa9.92□□□□□ -0.82
GPATCH4-208ENST00000497287 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
GPATCH4-208ENST00000497287 NSD2O96028 1365 aa9.91□□□□□ -0.82
GPATCH4-208ENST00000497287 NALCNQ8IZF0 1738 aa9.91□□□□□ -0.82
GPATCH4-208ENST00000497287 NUTM2FA1L443 756 aa9.91□□□□□ -0.82
GPATCH4-208ENST00000497287 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
GPATCH4-208ENST00000497287 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
GPATCH4-208ENST00000497287 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 FMN2Q9NZ56 1722 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 TMEM94Q12767 1356 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 USP32Q8NFA0 1604 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 ATF3P18847 181 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 STRCP1A6NGW2 1772 aa9.9□□□□□ -0.82
GPATCH4-208ENST00000497287 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.83
GPATCH4-208ENST00000497287 TOPAZ1Q8N9V7 1692 aa9.9□□□□□ -0.83
GPATCH4-208ENST00000497287 ACEP12821 1306 aa9.89□□□□□ -0.83
GPATCH4-208ENST00000497287 MORC1Q86VD1 984 aa9.89□□□□□ -0.83
GPATCH4-208ENST00000497287 NLRP13Q86W25 1043 aa9.89□□□□□ -0.83
GPATCH4-208ENST00000497287 NGDNQ8NEJ9 315 aaKnown RBP9.89□□□□□ -0.83
GPATCH4-208ENST00000497287 EDC4Q6P2E9 1401 aaKnown RBP9.89□□□□□ -0.83
GPATCH4-208ENST00000497287 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 DCCP43146 1447 aa9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 BRD4O60885 1362 aaPredicted RBP9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 MSH6P52701 1360 aa9.88□□□□□ -0.83
GPATCH4-208ENST00000497287 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
GPATCH4-208ENST00000497287 AKAP12Q02952 1782 aa9.87□□□□□ -0.83
GPATCH4-208ENST00000497287 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
GPATCH4-208ENST00000497287 LRRC7Q96NW7 1537 aa9.87□□□□□ -0.83
GPATCH4-208ENST00000497287 RGPD8O14715 1765 aaPredicted RBP9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 FYB1O15117 783 aa9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 PPP2R1AP30153 589 aa9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 ESCO1Q5FWF5 840 aa9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 MON2Q7Z3U7 1717 aa9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
GPATCH4-208ENST00000497287 IQSEC2Q5JU85 1478 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms