RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	ANKRD36B	Q8N2N9	1353 aa		30.19	■■■□□ 2.42
ARHGAP4-223	ENST00000494397	USP32	Q8NFA0	1604 aa		30.18	■■■□□ 2.42
ARHGAP4-223	ENST00000494397	ATAD2	Q6PL18	1390 aa		30.17	■■■□□ 2.42
ARHGAP4-223	ENST00000494397	CABP2	Q9NPB3	220 aa		30.17	■■■□□ 2.42
ARHGAP4-223	ENST00000494397	MINK1	Q8N4C8	1332 aa	Predicted RBP	30.14	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	SRPK2	P78362	688 aa	Known RBP	30.13	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	NUDC	Q9Y266	331 aa		30.13	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	C3	P01024	1663 aa		30.12	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	FER1L4	A9Z1Z3	1794 aa		30.11	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	CEBPA	P49715	358 aa	Predicted RBP	30.11	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	CGNL1	Q0VF96	1302 aa		30.11	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	NSD2	O96028	1365 aa		30.1	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	MET	P08581	1390 aa		30.1	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	TECPR2	O15040	1411 aa		30.08	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	WDR43	Q15061	677 aa	Known RBP eCLIP	30.08	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	SIRT1	Q96EB6	747 aa		30.08	■■■□□ 2.41
ARHGAP4-223	ENST00000494397	PLEKHG1	Q9ULL1	1385 aa		30.07	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	PDE3B	Q13370	1112 aa		30.05	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	MORC1	Q86VD1	984 aa		30.05	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	ADAMTS8	Q9UP79	889 aa		30.05	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	FAM135B	Q49AJ0	1406 aa		30.05	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	CDK19	Q9BWU1	502 aa		30.05	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	KNDC1	Q76NI1	1749 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397		A0A1W2PP64	1363 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	PLEKHH1	Q9ULM0	1364 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	SLIT1	O75093	1534 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	ADAMTS13	Q76LX8	1427 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	WAPL	Q7Z5K2	1190 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	DNAJC5	Q9H3Z4	198 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	TERF2IP	Q9NYB0	399 aa		30.03	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	ARHGAP23	Q9P227	1491 aa		30.02	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	POLR3A	O14802	1390 aa	Predicted RBP	30.02	■■■□□ 2.4
ARHGAP4-223	ENST00000494397	CPS1	P31327	1500 aa		30.01	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	ERICH6B	Q5W0A0	696 aa		30	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	BCAN	Q96GW7	911 aa		30	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	LTK	P29376	864 aa		29.99	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	EID1	Q9Y6B2	187 aa		29.99	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	CD163L1	Q9NR16	1453 aa		29.98	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	SENP3-EIF4A1	A0A087X0R7	540 aa		29.98	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	TXNDC2	Q86VQ3	553 aa		29.98	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	MED14	O60244	1454 aa		29.95	■■■□□ 2.39
ARHGAP4-223	ENST00000494397	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.95	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	PELP1	Q8IZL8	1130 aa	Known RBP	29.95	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.94	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	WASL	O00401	505 aa	Predicted RBP	29.92	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	ATP7B	P35670	1465 aa		29.92	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	RNF123	Q5XPI4	1314 aa		29.91	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	CABP1	Q9NZU7	370 aa		29.9	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	SALL2	Q9Y467	1007 aa	Predicted RBP	29.9	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	PLPPR3	Q6T4P5	718 aa		29.89	■■■□□ 2.38
ARHGAP4-223	ENST00000494397	TNNT2	P45379	298 aa	Predicted RBP	29.87	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	ROBO2	Q9HCK4	1378 aa		29.87	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	IRX6	P78412	446 aa	Predicted RBP	29.85	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	CFAP53	Q96M91	514 aa		29.85	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	TBX22	Q9Y458	520 aa		29.85	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	DIP2A	Q14689	1571 aa		29.84	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	FYB1	O15117	783 aa		29.83	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	MTHFS	P49914	203 aa		29.83	■■■□□ 2.37
ARHGAP4-223	ENST00000494397	ADGRB2	O60241	1585 aa		29.82	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.82	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	NGEF	Q8N5V2	710 aa		29.82	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	RIMS1	Q86UR5	1692 aa	Known RBP	29.82	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	PPIP5K1	Q6PFW1	1433 aa		29.81	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	ZNF521	Q96K83	1311 aa		29.8	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	SLC26A8	Q96RN1	970 aa		29.8	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	GGNBP2	Q9H3C7	697 aa		29.8	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	CPSF1	Q10570	1443 aa	Known RBP	29.8	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	PTPRU	Q92729	1446 aa		29.8	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	SHPRH	Q149N8	1683 aa		29.79	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	ANKRD26	Q9UPS8	1709 aa		29.79	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	CDCA7L	Q96GN5	454 aa		29.79	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	ADAMTSL3	P82987	1691 aa		29.79	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	NUDT16	Q96DE0	195 aa	Known RBP	29.78	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	CCDC61	Q9Y6R9	512 aa		29.77	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	PTCH1	Q13635	1447 aa		29.77	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	CCDC146	Q8IYE0	955 aa		29.77	■■■□□ 2.36
ARHGAP4-223	ENST00000494397	PPP4R2	Q9NY27	417 aa		29.76	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	EDC4	Q6P2E9	1401 aa	Known RBP	29.75	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	RCAN3	Q9UKA8	241 aa		29.75	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	CDC42BPG	Q6DT37	1551 aa		29.74	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	APAF1	O14727	1248 aa		29.73	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	AMOTL2	Q9Y2J4	779 aa		29.73	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	KIF20B	Q96Q89	1820 aa		29.71	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.71	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	GOLGA2	Q08379	1002 aa		29.71	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	PIK3R4	Q99570	1358 aa		29.7	■■■□□ 2.35
ARHGAP4-223	ENST00000494397	ZNF142	P52746	1687 aa	Predicted RBP	29.69	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	PRR36	Q9H6K5	1346 aa		29.69	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	RUNDC1	Q96C34	613 aa		29.68	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	RRP1	P56182	461 aa	Known RBP	29.67	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	ZNF692	Q9BU19	519 aa	Predicted RBP	29.67	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	COL3A1	P02461	1466 aa	Predicted RBP	29.66	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29.66	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	XRN1	Q8IZH2	1706 aa	Known RBP	29.64	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	DUSP27	Q5VZP5	1158 aa		29.64	■■■□□ 2.34
ARHGAP4-223	ENST00000494397	IQSEC2	Q5JU85	1478 aa		29.64	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	PNPLA6	Q8IY17	1366 aa		29.63	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	MON2	Q7Z3U7	1717 aa		29.63	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	NCKAP5L	Q9HCH0	1330 aa		29.63	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	SLFN5	Q08AF3	891 aa		29.62	■■■□□ 2.33

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