RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
ZIC4-215ENST00000493664 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
ZIC4-215ENST00000493664 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
ZIC4-215ENST00000493664 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
ZIC4-215ENST00000493664 MYOM2P54296 1465 aa18.1■□□□□ 0.49
ZIC4-215ENST00000493664 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
ZIC4-215ENST00000493664 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
ZIC4-215ENST00000493664 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
ZIC4-215ENST00000493664 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
ZIC4-215ENST00000493664 MTHFSP49914 203 aa18.09■□□□□ 0.49
ZIC4-215ENST00000493664 PCDHB15Q9Y5E8 787 aa18.09■□□□□ 0.49
ZIC4-215ENST00000493664 RUNDC1Q96C34 613 aa18.08■□□□□ 0.49
ZIC4-215ENST00000493664 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
ZIC4-215ENST00000493664 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
ZIC4-215ENST00000493664 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
ZIC4-215ENST00000493664 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
ZIC4-215ENST00000493664 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
ZIC4-215ENST00000493664 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
ZIC4-215ENST00000493664 ARAP3Q8WWN8 1544 aa18.06■□□□□ 0.48
ZIC4-215ENST00000493664 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
ZIC4-215ENST00000493664 GGT6Q6P531 493 aa18.05■□□□□ 0.48
ZIC4-215ENST00000493664 PPRC1Q5VV67 1664 aaKnown RBP18.05■□□□□ 0.48
ZIC4-215ENST00000493664 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
ZIC4-215ENST00000493664 EFCAB6Q5THR3 1501 aa18.05■□□□□ 0.48
ZIC4-215ENST00000493664 MAPK8IP3Q9UPT6 1336 aa18.04■□□□□ 0.48
ZIC4-215ENST00000493664 ABCA9Q8IUA7 1624 aa18.04■□□□□ 0.48
ZIC4-215ENST00000493664 VIRMAQ69YN4 1812 aaKnown RBP18.04■□□□□ 0.48
ZIC4-215ENST00000493664 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
ZIC4-215ENST00000493664 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
ZIC4-215ENST00000493664 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.47
ZIC4-215ENST00000493664 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.47
ZIC4-215ENST00000493664 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.47
ZIC4-215ENST00000493664 NINLQ9Y2I6 1382 aa18.01■□□□□ 0.47
ZIC4-215ENST00000493664 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
ZIC4-215ENST00000493664 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
ZIC4-215ENST00000493664 U2AF1L5P0DN76 240 aaPredicted RBP18.01■□□□□ 0.47
ZIC4-215ENST00000493664 U2AF1Q01081 240 aaKnown RBP eCLIP18.01■□□□□ 0.47
ZIC4-215ENST00000493664 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
ZIC4-215ENST00000493664 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
ZIC4-215ENST00000493664 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
ZIC4-215ENST00000493664 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
ZIC4-215ENST00000493664 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
ZIC4-215ENST00000493664 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
ZIC4-215ENST00000493664 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
ZIC4-215ENST00000493664 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
ZIC4-215ENST00000493664 NPM1P06748 294 aaKnown RBP eCLIP17.98■□□□□ 0.47
ZIC4-215ENST00000493664 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
ZIC4-215ENST00000493664 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
ZIC4-215ENST00000493664 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
ZIC4-215ENST00000493664 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
ZIC4-215ENST00000493664 NPATQ14207 1427 aa17.97■□□□□ 0.47
ZIC4-215ENST00000493664 POGKQ9P215 609 aa17.97■□□□□ 0.47
ZIC4-215ENST00000493664 ZNF518AQ6AHZ1 1483 aa17.97■□□□□ 0.47
ZIC4-215ENST00000493664 BECN1Q14457 450 aa17.96■□□□□ 0.47
ZIC4-215ENST00000493664 SPRYD3Q8NCJ5 442 aa17.96■□□□□ 0.47
ZIC4-215ENST00000493664 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
ZIC4-215ENST00000493664 ADGRB1O14514 1584 aa17.95■□□□□ 0.46
ZIC4-215ENST00000493664 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
ZIC4-215ENST00000493664 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
ZIC4-215ENST00000493664 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
ZIC4-215ENST00000493664 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
ZIC4-215ENST00000493664 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
ZIC4-215ENST00000493664 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
ZIC4-215ENST00000493664 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
ZIC4-215ENST00000493664 PPLO60437 1756 aa17.94■□□□□ 0.46
ZIC4-215ENST00000493664 MVPQ14764 893 aaKnown RBP17.93■□□□□ 0.46
ZIC4-215ENST00000493664 UPF2Q9HAU5 1272 aaKnown RBP17.93■□□□□ 0.46
ZIC4-215ENST00000493664 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
ZIC4-215ENST00000493664 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
ZIC4-215ENST00000493664 STK26Q9P289 416 aa17.92■□□□□ 0.46
ZIC4-215ENST00000493664 TBC1D2Q9BYX2 928 aa17.92■□□□□ 0.46
ZIC4-215ENST00000493664 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
ZIC4-215ENST00000493664 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
ZIC4-215ENST00000493664 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
ZIC4-215ENST00000493664 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
ZIC4-215ENST00000493664 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
ZIC4-215ENST00000493664 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
ZIC4-215ENST00000493664 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
ZIC4-215ENST00000493664 LMTK2Q8IWU2 1503 aa17.89■□□□□ 0.46
ZIC4-215ENST00000493664 ANKRD36BQ8N2N9 1353 aa17.89■□□□□ 0.45
ZIC4-215ENST00000493664 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
ZIC4-215ENST00000493664 TRIM27P14373 513 aa17.88■□□□□ 0.45
ZIC4-215ENST00000493664 AAMPQ13685 434 aa17.88■□□□□ 0.45
ZIC4-215ENST00000493664 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
ZIC4-215ENST00000493664 ARXQ96QS3 562 aa17.88■□□□□ 0.45
ZIC4-215ENST00000493664 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
ZIC4-215ENST00000493664 ITPRIPQ8IWB1 547 aa17.88■□□□□ 0.45
ZIC4-215ENST00000493664 GLI2P10070 1586 aa17.87■□□□□ 0.45
ZIC4-215ENST00000493664 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
ZIC4-215ENST00000493664 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
ZIC4-215ENST00000493664 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
ZIC4-215ENST00000493664 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
ZIC4-215ENST00000493664 A0A1W2PP64 1363 aa17.86■□□□□ 0.45
ZIC4-215ENST00000493664 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
ZIC4-215ENST00000493664 PLEKHF1Q96S99 279 aa17.85■□□□□ 0.45
ZIC4-215ENST00000493664 USP32Q8NFA0 1604 aa17.85■□□□□ 0.45
ZIC4-215ENST00000493664 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
ZIC4-215ENST00000493664 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
ZIC4-215ENST00000493664 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
ZIC4-215ENST00000493664 RAPGEF3O95398 923 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms