RNA–Protein interactions for RNA: ENST00000493546.1

PLXNA3-207, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-207ENST00000493546 NBPF1Q3BBV0 1214 aa13.94□□□□□ -0.18
PLXNA3-207ENST00000493546 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
PLXNA3-207ENST00000493546 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
PLXNA3-207ENST00000493546 DIP2AQ14689 1571 aa13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 MEX3CQ5U5Q3 659 aaKnown RBP13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
PLXNA3-207ENST00000493546 COL16A1Q07092 1604 aaPredicted RBP13.91□□□□□ -0.18
PLXNA3-207ENST00000493546 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
PLXNA3-207ENST00000493546 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
PLXNA3-207ENST00000493546 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
PLXNA3-207ENST00000493546 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
PLXNA3-207ENST00000493546 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
PLXNA3-207ENST00000493546 PIK3C2GO75747 1445 aa13.9□□□□□ -0.19
PLXNA3-207ENST00000493546 PRKRIP1Q9H875 184 aaPredicted RBP13.89□□□□□ -0.19
PLXNA3-207ENST00000493546 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
PLXNA3-207ENST00000493546 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
PLXNA3-207ENST00000493546 BRINP3Q76B58 766 aa13.88□□□□□ -0.19
PLXNA3-207ENST00000493546 LRP6O75581 1613 aa13.88□□□□□ -0.19
PLXNA3-207ENST00000493546 PPLO60437 1756 aa13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 RALBP1Q15311 655 aa13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 CFAP70Q5T0N1 1121 aa13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
PLXNA3-207ENST00000493546 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
PLXNA3-207ENST00000493546 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
PLXNA3-207ENST00000493546 TESK2Q96S53 571 aa13.85□□□□□ -0.19
PLXNA3-207ENST00000493546 METP08581 1390 aa13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 SBNO2Q9Y2G9 1366 aa13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
PLXNA3-207ENST00000493546 DCCP43146 1447 aa13.83□□□□□ -0.2
PLXNA3-207ENST00000493546 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
PLXNA3-207ENST00000493546 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
PLXNA3-207ENST00000493546 ASXL1Q8IXJ9 1541 aa13.82□□□□□ -0.2
PLXNA3-207ENST00000493546 MST1RQ04912 1400 aa13.81□□□□□ -0.2
PLXNA3-207ENST00000493546 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
PLXNA3-207ENST00000493546 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
PLXNA3-207ENST00000493546 RXRBP28702 533 aa13.79□□□□□ -0.2
PLXNA3-207ENST00000493546 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
PLXNA3-207ENST00000493546 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
PLXNA3-207ENST00000493546 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
PLXNA3-207ENST00000493546 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
PLXNA3-207ENST00000493546 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
PLXNA3-207ENST00000493546 AFF2P51816 1311 aa13.78□□□□□ -0.2
PLXNA3-207ENST00000493546 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
PLXNA3-207ENST00000493546 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
PLXNA3-207ENST00000493546 PUS7Q96PZ0 661 aaKnown RBP13.77□□□□□ -0.21
PLXNA3-207ENST00000493546 PANK3Q9H999 370 aa13.77□□□□□ -0.21
PLXNA3-207ENST00000493546 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
PLXNA3-207ENST00000493546 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
PLXNA3-207ENST00000493546 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
PLXNA3-207ENST00000493546 NHSL1Q5SYE7 1610 aa13.75□□□□□ -0.21
PLXNA3-207ENST00000493546 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
PLXNA3-207ENST00000493546 NALCNQ8IZF0 1738 aa13.75□□□□□ -0.21
PLXNA3-207ENST00000493546 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
PLXNA3-207ENST00000493546 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
PLXNA3-207ENST00000493546 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
PLXNA3-207ENST00000493546 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
PLXNA3-207ENST00000493546 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
PLXNA3-207ENST00000493546 ADAMTS2O95450 1211 aa13.73□□□□□ -0.21
PLXNA3-207ENST00000493546 POGKQ9P215 609 aa13.73□□□□□ -0.21
PLXNA3-207ENST00000493546 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
PLXNA3-207ENST00000493546 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
PLXNA3-207ENST00000493546 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
PLXNA3-207ENST00000493546 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
PLXNA3-207ENST00000493546 ORAI2Q96SN7 254 aa13.72□□□□□ -0.21
PLXNA3-207ENST00000493546 QTRT2Q9H974 415 aaKnown RBP13.72□□□□□ -0.21
PLXNA3-207ENST00000493546 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.21
PLXNA3-207ENST00000493546 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
PLXNA3-207ENST00000493546 NGLY1Q96IV0 654 aa13.71□□□□□ -0.21
PLXNA3-207ENST00000493546 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
PLXNA3-207ENST00000493546 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.22
PLXNA3-207ENST00000493546 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
PLXNA3-207ENST00000493546 RBM6P78332 1123 aaKnown RBP13.7□□□□□ -0.22
PLXNA3-207ENST00000493546 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
PLXNA3-207ENST00000493546 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
PLXNA3-207ENST00000493546 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
PLXNA3-207ENST00000493546 NEFLP07196 543 aa13.69□□□□□ -0.22
PLXNA3-207ENST00000493546 RGS12O14924 1447 aa13.68□□□□□ -0.22
PLXNA3-207ENST00000493546 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
PLXNA3-207ENST00000493546 STK26Q9P289 416 aa13.68□□□□□ -0.22
PLXNA3-207ENST00000493546 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
PLXNA3-207ENST00000493546 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
PLXNA3-207ENST00000493546 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
PLXNA3-207ENST00000493546 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
PLXNA3-207ENST00000493546 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
PLXNA3-207ENST00000493546 USP21Q9UK80 565 aa13.66□□□□□ -0.22
PLXNA3-207ENST00000493546 ARHGEF28Q8N1W1 1705 aaKnown RBP13.66□□□□□ -0.22
PLXNA3-207ENST00000493546 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
PLXNA3-207ENST00000493546 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
PLXNA3-207ENST00000493546 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
PLXNA3-207ENST00000493546 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms