RNA–Protein interactions for RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 PUS7Q96PZ0 661 aaKnown RBP11.94□□□□□ -0.5
SNHG16-202ENST00000493536 SLC26A8Q96RN1 970 aa11.94□□□□□ -0.5
SNHG16-202ENST00000493536 DLC1Q96QB1 1528 aa11.94□□□□□ -0.5
SNHG16-202ENST00000493536 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
SNHG16-202ENST00000493536 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
SNHG16-202ENST00000493536 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
SNHG16-202ENST00000493536 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
SNHG16-202ENST00000493536 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
SNHG16-202ENST00000493536 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNHG16-202ENST00000493536 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
SNHG16-202ENST00000493536 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
SNHG16-202ENST00000493536 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
SNHG16-202ENST00000493536 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
SNHG16-202ENST00000493536 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
SNHG16-202ENST00000493536 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
SNHG16-202ENST00000493536 KNDC1Q76NI1 1749 aa11.9□□□□□ -0.5
SNHG16-202ENST00000493536 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
SNHG16-202ENST00000493536 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.5
SNHG16-202ENST00000493536 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
SNHG16-202ENST00000493536 TBX22Q9Y458 520 aa11.89□□□□□ -0.51
SNHG16-202ENST00000493536 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
SNHG16-202ENST00000493536 TECPR2O15040 1411 aa11.89□□□□□ -0.51
SNHG16-202ENST00000493536 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
SNHG16-202ENST00000493536 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
SNHG16-202ENST00000493536 NSD3Q9BZ95 1437 aa11.88□□□□□ -0.51
SNHG16-202ENST00000493536 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
SNHG16-202ENST00000493536 CPS1P31327 1500 aa11.88□□□□□ -0.51
SNHG16-202ENST00000493536 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
SNHG16-202ENST00000493536 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
SNHG16-202ENST00000493536 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
SNHG16-202ENST00000493536 MED14O60244 1454 aa11.87□□□□□ -0.51
SNHG16-202ENST00000493536 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
SNHG16-202ENST00000493536 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
SNHG16-202ENST00000493536 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
SNHG16-202ENST00000493536 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
SNHG16-202ENST00000493536 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
SNHG16-202ENST00000493536 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
SNHG16-202ENST00000493536 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
SNHG16-202ENST00000493536 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
SNHG16-202ENST00000493536 PTPRUQ92729 1446 aa11.84□□□□□ -0.51
SNHG16-202ENST00000493536 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
SNHG16-202ENST00000493536 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
SNHG16-202ENST00000493536 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
SNHG16-202ENST00000493536 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
SNHG16-202ENST00000493536 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
SNHG16-202ENST00000493536 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
SNHG16-202ENST00000493536 PIK3R4Q99570 1358 aa11.81□□□□□ -0.52
SNHG16-202ENST00000493536 USP32Q8NFA0 1604 aa11.81□□□□□ -0.52
SNHG16-202ENST00000493536 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
SNHG16-202ENST00000493536 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
SNHG16-202ENST00000493536 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
SNHG16-202ENST00000493536 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
SNHG16-202ENST00000493536 NSD2O96028 1365 aa11.8□□□□□ -0.52
SNHG16-202ENST00000493536 KCNA6P17658 529 aa11.8□□□□□ -0.52
SNHG16-202ENST00000493536 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.525e-28■□□□□ 9.6
SNHG16-202ENST00000493536 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
SNHG16-202ENST00000493536 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
SNHG16-202ENST00000493536 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
SNHG16-202ENST00000493536 ATP7BP35670 1465 aa11.79□□□□□ -0.52
SNHG16-202ENST00000493536 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
SNHG16-202ENST00000493536 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
SNHG16-202ENST00000493536 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
SNHG16-202ENST00000493536 XRN1Q8IZH2 1706 aaKnown RBP11.78□□□□□ -0.52
SNHG16-202ENST00000493536 ADGRB2O60241 1585 aa11.78□□□□□ -0.52
SNHG16-202ENST00000493536 GGNBP2Q9H3C7 697 aa11.78□□□□□ -0.52
SNHG16-202ENST00000493536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.52
SNHG16-202ENST00000493536 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.53
SNHG16-202ENST00000493536 SENP3-EIF4A1A0A087X0R7 540 aa11.77□□□□□ -0.53
SNHG16-202ENST00000493536 FYB1O15117 783 aa11.76□□□□□ -0.53
SNHG16-202ENST00000493536 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
SNHG16-202ENST00000493536 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
SNHG16-202ENST00000493536 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
SNHG16-202ENST00000493536 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
SNHG16-202ENST00000493536 CFAP53Q96M91 514 aa11.75□□□□□ -0.53
SNHG16-202ENST00000493536 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
SNHG16-202ENST00000493536 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
SNHG16-202ENST00000493536 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
SNHG16-202ENST00000493536 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
SNHG16-202ENST00000493536 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
SNHG16-202ENST00000493536 MTHFSP49914 203 aa11.74□□□□□ -0.53
SNHG16-202ENST00000493536 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
SNHG16-202ENST00000493536 ANKRD26Q9UPS8 1709 aa11.73□□□□□ -0.53
SNHG16-202ENST00000493536 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
SNHG16-202ENST00000493536 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
SNHG16-202ENST00000493536 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
SNHG16-202ENST00000493536 ACEP12821 1306 aa11.72□□□□□ -0.53
SNHG16-202ENST00000493536 HSPA2P54652 639 aa11.72□□□□□ -0.53
SNHG16-202ENST00000493536 INSRP06213 1382 aa11.72□□□□□ -0.53
SNHG16-202ENST00000493536 AKAP12Q02952 1782 aa11.72□□□□□ -0.53
SNHG16-202ENST00000493536 PLEKHG3A1L390 1219 aa11.71□□□□□ -0.53
SNHG16-202ENST00000493536 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
SNHG16-202ENST00000493536 MON2Q7Z3U7 1717 aa11.71□□□□□ -0.53
SNHG16-202ENST00000493536 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.53
SNHG16-202ENST00000493536 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.54
SNHG16-202ENST00000493536 NGDNQ8NEJ9 315 aaKnown RBP11.71□□□□□ -0.54
SNHG16-202ENST00000493536 RGPD8O14715 1765 aaPredicted RBP11.71□□□□□ -0.54
SNHG16-202ENST00000493536 NME9Q86XW9 330 aa11.7□□□□□ -0.54
SNHG16-202ENST00000493536 COG3Q96JB2 828 aa11.7□□□□□ -0.54
SNHG16-202ENST00000493536 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
SNHG16-202ENST00000493536 PROSER2Q86WR7 435 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms