RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PCDHGC3Q9UN70 934 aa7.84□□□□□ -1.15
CLK1-213ENST00000492793 LILRB3O75022 631 aa7.83□□□□□ -1.16
CLK1-213ENST00000492793 MTMR2Q13614 643 aa7.83□□□□□ -1.16
CLK1-213ENST00000492793 FBXO31Q5XUX0 539 aaPredicted RBP7.83□□□□□ -1.16
CLK1-213ENST00000492793 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
CLK1-213ENST00000492793 ACTN4O43707 911 aaKnown RBP7.82□□□□□ -1.16
CLK1-213ENST00000492793 MCM6Q14566 821 aa7.82□□□□□ -1.16
CLK1-213ENST00000492793 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
CLK1-213ENST00000492793 RAD21O60216 631 aa7.81□□□□□ -1.16
CLK1-213ENST00000492793 APLP1P51693 650 aa7.81□□□□□ -1.16
CLK1-213ENST00000492793 SYMPKQ92797 1274 aaKnown RBP7.81□□□□□ -1.16
CLK1-213ENST00000492793 WBP1LQ9NX94 342 aa7.81□□□□□ -1.16
CLK1-213ENST00000492793 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
CLK1-213ENST00000492793 SPDYE5A6NIY4 337 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 PTPN5P54829 565 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 HELBQ8NG08 1087 aaPredicted RBP7.8□□□□□ -1.16
CLK1-213ENST00000492793 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
CLK1-213ENST00000492793 Q3C1V9 767 aa7.79□□□□□ -1.16
CLK1-213ENST00000492793 MORN1Q5T089 497 aa7.79□□□□□ -1.16
CLK1-213ENST00000492793 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
CLK1-213ENST00000492793 USP17L8P0C7I0 530 aa7.78□□□□□ -1.16
CLK1-213ENST00000492793 NR1I2O75469 434 aa7.77□□□□□ -1.17
CLK1-213ENST00000492793 COPS2P61201 443 aa7.77□□□□□ -1.17
CLK1-213ENST00000492793 PRR7Q8TB68 274 aa7.77□□□□□ -1.17
CLK1-213ENST00000492793 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
CLK1-213ENST00000492793 APBB1O00213 710 aa7.76□□□□□ -1.17
CLK1-213ENST00000492793 CTDSPL2Q05D32 466 aa7.76□□□□□ -1.17
CLK1-213ENST00000492793 BLOC1S3Q6QNY0 202 aa7.76□□□□□ -1.17
CLK1-213ENST00000492793 CFAP99D6REC4 459 aa7.75□□□□□ -1.17
CLK1-213ENST00000492793 RNF19BQ6ZMZ0 732 aa7.75□□□□□ -1.17
CLK1-213ENST00000492793 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
CLK1-213ENST00000492793 SCUBE3Q8IX30 993 aa7.75□□□□□ -1.17
CLK1-213ENST00000492793 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
CLK1-213ENST00000492793 FMNL1O95466 1100 aaPredicted RBP7.74□□□□□ -1.17
CLK1-213ENST00000492793 ABL2P42684 1182 aa7.73□□□□□ -1.17
CLK1-213ENST00000492793 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
CLK1-213ENST00000492793 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
CLK1-213ENST00000492793 MYT1LQ9UL68 1186 aa7.73□□□□□ -1.17
CLK1-213ENST00000492793 ARID3CA6NKF2 412 aa7.72□□□□□ -1.17
CLK1-213ENST00000492793 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
CLK1-213ENST00000492793 WWC1Q8IX03 1113 aa7.72□□□□□ -1.17
CLK1-213ENST00000492793 LRRN4Q8WUT4 740 aa7.72□□□□□ -1.17
CLK1-213ENST00000492793 GDPD2Q9HCC8 539 aa7.72□□□□□ -1.17
CLK1-213ENST00000492793 COG6Q9Y2V7 657 aa7.72□□□□□ -1.17
CLK1-213ENST00000492793 A6NJR5 290 aa7.71□□□□□ -1.18
CLK1-213ENST00000492793 NYAP1Q6ZVC0 841 aa7.71□□□□□ -1.18
CLK1-213ENST00000492793 BRICD5Q6PL45 260 aa7.7□□□□□ -1.18
CLK1-213ENST00000492793 ARID3AQ99856 593 aa7.7□□□□□ -1.18
CLK1-213ENST00000492793 HMX1Q9NP08 348 aaPredicted RBP7.7□□□□□ -1.18
CLK1-213ENST00000492793 TBC1D2BQ9UPU7 963 aa7.7□□□□□ -1.18
CLK1-213ENST00000492793 TRAK2O60296 914 aa7.69□□□□□ -1.18
CLK1-213ENST00000492793 SPSB2Q99619 263 aa7.69□□□□□ -1.18
CLK1-213ENST00000492793 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
CLK1-213ENST00000492793 PER1O15534 1290 aaPredicted RBP7.68□□□□□ -1.18
CLK1-213ENST00000492793 TLL1O43897 1013 aa7.68□□□□□ -1.18
CLK1-213ENST00000492793 MTRQ99707 1265 aa7.68□□□□□ -1.18
CLK1-213ENST00000492793 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
CLK1-213ENST00000492793 ZNF330Q9Y3S2 320 aaPredicted RBP7.68□□□□□ -1.18
CLK1-213ENST00000492793 SALL2Q9Y467 1007 aaPredicted RBP7.68□□□□□ -1.18
CLK1-213ENST00000492793 ZPR1O75312 459 aa7.67□□□□□ -1.18
CLK1-213ENST00000492793 CTHP32929 405 aa7.67□□□□□ -1.18
CLK1-213ENST00000492793 NR6A1Q15406 480 aa7.67□□□□□ -1.18
CLK1-213ENST00000492793 THAP11Q96EK4 314 aa7.67□□□□□ -1.18
CLK1-213ENST00000492793 JUNDP17535 347 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 DESI1Q6ICB0 168 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 LYPD8Q6UX82 237 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 PNMA1Q8ND90 353 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 RNF166Q96A37 237 aaPredicted RBP7.65□□□□□ -1.18
CLK1-213ENST00000492793 GJD4Q96KN9 370 aaPredicted RBP7.65□□□□□ -1.18
CLK1-213ENST00000492793 IL21Q9HBE4 155 aa7.65□□□□□ -1.18
CLK1-213ENST00000492793 ADH1BP00325 375 aa7.64□□□□□ -1.19
CLK1-213ENST00000492793 CCDC24Q8N4L8 307 aa7.64□□□□□ -1.19
CLK1-213ENST00000492793 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
CLK1-213ENST00000492793 SOCS7O14512 581 aa7.63□□□□□ -1.19
CLK1-213ENST00000492793 MSS51Q4VC12 460 aa7.63□□□□□ -1.19
CLK1-213ENST00000492793 FAM160A2Q8N612 972 aaPredicted RBP7.63□□□□□ -1.19
CLK1-213ENST00000492793 TRIM34Q9BYJ4 488 aa7.63□□□□□ -1.19
CLK1-213ENST00000492793 SLC6A16Q9GZN6 736 aa7.63□□□□□ -1.19
CLK1-213ENST00000492793 PTPRNQ16849 979 aa7.62□□□□□ -1.19
CLK1-213ENST00000492793 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
CLK1-213ENST00000492793 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
CLK1-213ENST00000492793 NUDT12Q9BQG2 462 aa7.62□□□□□ -1.19
CLK1-213ENST00000492793 HCSTQ9UBK5 93 aa7.62□□□□□ -1.19
CLK1-213ENST00000492793 CCNYL3P0C7X3 344 aa7.61□□□□□ -1.19
CLK1-213ENST00000492793 MAP10Q9P2G4 905 aa7.61□□□□□ -1.19
CLK1-213ENST00000492793 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
CLK1-213ENST00000492793 C1orf115Q9H7X2 142 aa7.6□□□□□ -1.19
CLK1-213ENST00000492793 DXOO77932 396 aaKnown RBP7.59□□□□□ -1.19
CLK1-213ENST00000492793 VAC14Q08AM6 782 aa7.59□□□□□ -1.19
CLK1-213ENST00000492793 WASHC4Q2M389 1173 aa7.59□□□□□ -1.19
CLK1-213ENST00000492793 NKX2-3Q8TAU0 364 aa7.59□□□□□ -1.19
CLK1-213ENST00000492793 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
CLK1-213ENST00000492793 POM121CA8CG34 1229 aa7.58□□□□□ -1.2
CLK1-213ENST00000492793 S1PR4O95977 384 aa7.58□□□□□ -1.2
CLK1-213ENST00000492793 MMP16P51512 607 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms