RNA–Protein interactions for RNA: ENST00000492146.1

SFMBT1-207, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 3

Gene SFMBT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-207ENST00000492146 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
SFMBT1-207ENST00000492146 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
SFMBT1-207ENST00000492146 METP08581 1390 aa13.32□□□□□ -0.28
SFMBT1-207ENST00000492146 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
SFMBT1-207ENST00000492146 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
SFMBT1-207ENST00000492146 POGKQ9P215 609 aa13.32□□□□□ -0.28
SFMBT1-207ENST00000492146 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 KNDC1Q76NI1 1749 aa13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 SBNO2Q9Y2G9 1366 aa13.3□□□□□ -0.28
SFMBT1-207ENST00000492146 PROSER2Q86WR7 435 aaPredicted RBP13.29□□□□□ -0.28
SFMBT1-207ENST00000492146 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
SFMBT1-207ENST00000492146 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
SFMBT1-207ENST00000492146 POLA2Q14181 598 aa13.28□□□□□ -0.28
SFMBT1-207ENST00000492146 STK26Q9P289 416 aa13.28□□□□□ -0.28
SFMBT1-207ENST00000492146 USP47Q96K76 1375 aa13.27□□□□□ -0.29
SFMBT1-207ENST00000492146 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
SFMBT1-207ENST00000492146 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
SFMBT1-207ENST00000492146 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
SFMBT1-207ENST00000492146 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
SFMBT1-207ENST00000492146 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
SFMBT1-207ENST00000492146 DCCP43146 1447 aa13.25□□□□□ -0.29
SFMBT1-207ENST00000492146 EVC2Q86UK5 1308 aa13.25□□□□□ -0.29
SFMBT1-207ENST00000492146 TMF1P82094 1093 aa13.25□□□□□ -0.29
SFMBT1-207ENST00000492146 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
SFMBT1-207ENST00000492146 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
SFMBT1-207ENST00000492146 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
SFMBT1-207ENST00000492146 MSH6P52701 1360 aa13.24□□□□□ -0.29
SFMBT1-207ENST00000492146 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
SFMBT1-207ENST00000492146 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
SFMBT1-207ENST00000492146 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
SFMBT1-207ENST00000492146 ROBO2Q9HCK4 1378 aa13.22□□□□□ -0.29
SFMBT1-207ENST00000492146 ATF3P18847 181 aa13.22□□□□□ -0.29
SFMBT1-207ENST00000492146 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
SFMBT1-207ENST00000492146 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.3
SFMBT1-207ENST00000492146 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
SFMBT1-207ENST00000492146 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
SFMBT1-207ENST00000492146 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 TOM1O60784 492 aa13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
SFMBT1-207ENST00000492146 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
SFMBT1-207ENST00000492146 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
SFMBT1-207ENST00000492146 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
SFMBT1-207ENST00000492146 ABCB7O75027 752 aa13.17□□□□□ -0.3
SFMBT1-207ENST00000492146 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
SFMBT1-207ENST00000492146 QRICH2Q9H0J4 1663 aa13.16□□□□□ -0.3
SFMBT1-207ENST00000492146 DSG3P32926 999 aa13.16□□□□□ -0.3
SFMBT1-207ENST00000492146 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
SFMBT1-207ENST00000492146 TESK2Q96S53 571 aa13.16□□□□□ -0.3
SFMBT1-207ENST00000492146 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
SFMBT1-207ENST00000492146 SAFB2Q14151 953 aaKnown RBP eCLIP13.15□□□□□ -0.3
SFMBT1-207ENST00000492146 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
SFMBT1-207ENST00000492146 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
SFMBT1-207ENST00000492146 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
SFMBT1-207ENST00000492146 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
SFMBT1-207ENST00000492146 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
SFMBT1-207ENST00000492146 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
SFMBT1-207ENST00000492146 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
SFMBT1-207ENST00000492146 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
SFMBT1-207ENST00000492146 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
SFMBT1-207ENST00000492146 TULP4Q9NRJ4 1543 aa13.12□□□□□ -0.31
SFMBT1-207ENST00000492146 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
SFMBT1-207ENST00000492146 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
SFMBT1-207ENST00000492146 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
SFMBT1-207ENST00000492146 HIRIP3Q9BW71 556 aaPredicted RBP13.1□□□□□ -0.31
SFMBT1-207ENST00000492146 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
SFMBT1-207ENST00000492146 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
SFMBT1-207ENST00000492146 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
SFMBT1-207ENST00000492146 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
SFMBT1-207ENST00000492146 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
SFMBT1-207ENST00000492146 PSME1Q06323 249 aa13.08□□□□□ -0.32
SFMBT1-207ENST00000492146 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
SFMBT1-207ENST00000492146 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
SFMBT1-207ENST00000492146 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
SFMBT1-207ENST00000492146 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 MST1RQ04912 1400 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
SFMBT1-207ENST00000492146 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 ATP7BP35670 1465 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 NGDNQ8NEJ9 315 aaKnown RBP13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 DISP3Q9P2K9 1392 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
SFMBT1-207ENST00000492146 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
SFMBT1-207ENST00000492146 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
SFMBT1-207ENST00000492146 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
SFMBT1-207ENST00000492146 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
SFMBT1-207ENST00000492146 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms