RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 PHF12Q96QT6 1004 aa7.67□□□□□ -1.18
UBE2D4-211ENST00000491770 TSHZ2Q9NRE2 1034 aa7.67□□□□□ -1.18
UBE2D4-211ENST00000491770 PSEN1P49768 467 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 HDGFP51858 240 aaKnown RBP7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 TXNDC2Q86VQ3 553 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 ROCK1Q13464 1354 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 SLIT1O75093 1534 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 VWDEQ8N2E2 1590 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 E9PCH4 1651 aa7.66□□□□□ -1.18
UBE2D4-211ENST00000491770 MED14O60244 1454 aa7.65□□□□□ -1.18
UBE2D4-211ENST00000491770 KIF1BO60333 1816 aa7.65□□□□□ -1.18
UBE2D4-211ENST00000491770 NUP155O75694 1391 aa7.65□□□□□ -1.18
UBE2D4-211ENST00000491770 TMEM2Q9UHN6 1383 aa7.64□□□□□ -1.19
UBE2D4-211ENST00000491770 DIP2AQ14689 1571 aa7.63□□□□□ -1.19
UBE2D4-211ENST00000491770 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
UBE2D4-211ENST00000491770 TRIM52Q96A61 297 aa7.63□□□□□ -1.19
UBE2D4-211ENST00000491770 SLC52A1Q9NWF4 448 aa7.63□□□□□ -1.19
UBE2D4-211ENST00000491770 NKTRP30414 1462 aaKnown RBP7.62□□□□□ -1.19
UBE2D4-211ENST00000491770 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
UBE2D4-211ENST00000491770 MSH6P52701 1360 aa7.62□□□□□ -1.19
UBE2D4-211ENST00000491770 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBE2D4-211ENST00000491770 TRPM2O94759 1503 aa7.62□□□□□ -1.19
UBE2D4-211ENST00000491770 RIMS2Q9UQ26 1411 aa7.61□□□□□ -1.19
UBE2D4-211ENST00000491770 EVX2Q03828 476 aa7.61□□□□□ -1.19
UBE2D4-211ENST00000491770 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
UBE2D4-211ENST00000491770 NOS1P29475 1434 aa7.61□□□□□ -1.19
UBE2D4-211ENST00000491770 TMEM131LA2VDJ0 1609 aa7.6□□□□□ -1.19
UBE2D4-211ENST00000491770 NWD1Q149M9 1564 aa7.6□□□□□ -1.19
UBE2D4-211ENST00000491770 LRRC7Q96NW7 1537 aa7.6□□□□□ -1.19
UBE2D4-211ENST00000491770 RRBP1Q9P2E9 1410 aaKnown RBP7.6□□□□□ -1.19
UBE2D4-211ENST00000491770 MED1Q15648 1581 aaPredicted RBP7.59□□□□□ -1.19
UBE2D4-211ENST00000491770 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
UBE2D4-211ENST00000491770 SLC26A8Q96RN1 970 aa7.59□□□□□ -1.19
UBE2D4-211ENST00000491770 TRPC6Q9Y210 931 aa7.59□□□□□ -1.19
UBE2D4-211ENST00000491770 PLEKHG1Q9ULL1 1385 aa7.59□□□□□ -1.2
UBE2D4-211ENST00000491770 IDI1Q13907 227 aa7.58□□□□□ -1.2
UBE2D4-211ENST00000491770 PROSER2Q86WR7 435 aaPredicted RBP7.58□□□□□ -1.2
UBE2D4-211ENST00000491770 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
UBE2D4-211ENST00000491770 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
UBE2D4-211ENST00000491770 CLTCL1P53675 1640 aa7.57□□□□□ -1.2
UBE2D4-211ENST00000491770 PHLPP1O60346 1717 aa7.57□□□□□ -1.2
UBE2D4-211ENST00000491770 TMEM94Q12767 1356 aa7.57□□□□□ -1.2
UBE2D4-211ENST00000491770 XIRP1Q702N8 1843 aaKnown RBP7.57□□□□□ -1.2
UBE2D4-211ENST00000491770 HFM1A2PYH4 1435 aa7.56□□□□□ -1.2
UBE2D4-211ENST00000491770 NUTM2DQ5VT03 806 aaPredicted RBP7.56□□□□□ -1.2
UBE2D4-211ENST00000491770 EFCAB3Q8N7B9 438 aa7.56□□□□□ -1.2
UBE2D4-211ENST00000491770 RYDENQ9NUL5 291 aaKnown RBP7.56□□□□□ -1.2
UBE2D4-211ENST00000491770 CHD2O14647 1828 aaKnown RBP7.56□□□□□ -1.2
UBE2D4-211ENST00000491770 CCDC144AA2RUR9 1427 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 HAX1O00165 279 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 KCNA6P17658 529 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 ATF3P18847 181 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 LTKP29376 864 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 HSPA1LP34931 641 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 CABP2Q9NPB3 220 aa7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 SETD1AO15047 1707 aaKnown RBP7.55□□□□□ -1.2
UBE2D4-211ENST00000491770 ZFYVE9O95405 1425 aa7.54□□□□□ -1.2
UBE2D4-211ENST00000491770 NAIPQ13075 1403 aa7.54□□□□□ -1.2
UBE2D4-211ENST00000491770 MEX3CQ5U5Q3 659 aaKnown RBP7.54□□□□□ -1.2
UBE2D4-211ENST00000491770 FBXO22Q8NEZ5 403 aa7.54□□□□□ -1.2
UBE2D4-211ENST00000491770 TMEM106CQ9BVX2 250 aa7.53□□□□□ -1.2
UBE2D4-211ENST00000491770 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.2
UBE2D4-211ENST00000491770 PPLO60437 1756 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 SETBP1Q9Y6X0 1596 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 SOX12O15370 315 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 GALR2O43603 387 aaPredicted RBP7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 ALKQ9UM73 1620 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 NEXMIFQ5QGS0 1516 aa7.52□□□□□ -1.21
UBE2D4-211ENST00000491770 TIE1P35590 1138 aa7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 CADPS2Q86UW7 1296 aa7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 PHF8Q9UPP1 1060 aa7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 XRN1Q8IZH2 1706 aaKnown RBP7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 LAMC1P11047 1609 aa7.51□□□□□ -1.21
UBE2D4-211ENST00000491770 TTLL13PA6NNM8 815 aa7.5□□□□□ -1.21
UBE2D4-211ENST00000491770 PPP1R37O75864 691 aa7.5□□□□□ -1.21
UBE2D4-211ENST00000491770 RBM33Q96EV2 1170 aaKnown RBP7.5□□□□□ -1.21
UBE2D4-211ENST00000491770 NALCNQ8IZF0 1738 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 NLRP6P59044 892 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 MS4A4AQ96JQ5 239 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 BMP2KQ9NSY1 1161 aaPredicted RBP7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 TBX22Q9Y458 520 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 DCCP43146 1447 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
UBE2D4-211ENST00000491770 FAM135BQ49AJ0 1406 aa7.48□□□□□ -1.21
UBE2D4-211ENST00000491770 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
UBE2D4-211ENST00000491770 AMOTL2Q9Y2J4 779 aa7.48□□□□□ -1.21
UBE2D4-211ENST00000491770 NCOA3Q9Y6Q9 1424 aa7.48□□□□□ -1.21
UBE2D4-211ENST00000491770 JCADQ9P266 1359 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 SETD5Q9C0A6 1442 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 ADGRL3Q9HAR2 1447 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 CLCN6P51797 869 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 SHPRHQ149N8 1683 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 IFT172Q9UG01 1749 aa7.47□□□□□ -1.21
UBE2D4-211ENST00000491770 PTCH1Q13635 1447 aa7.46□□□□□ -1.21
UBE2D4-211ENST00000491770 AHDC1Q5TGY3 1603 aaPredicted RBP7.46□□□□□ -1.21
UBE2D4-211ENST00000491770 SOCS7O14512 581 aa7.46□□□□□ -1.22
UBE2D4-211ENST00000491770 POTEHQ6S545 545 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms