RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
VARS2-210ENST00000490699 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
VARS2-210ENST00000490699 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
VARS2-210ENST00000490699 QRICH2Q9H0J4 1663 aa15.31■□□□□ 0.04
VARS2-210ENST00000490699 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
VARS2-210ENST00000490699 DSG3P32926 999 aa15.3■□□□□ 0.04
VARS2-210ENST00000490699 PTPRUQ92729 1446 aa15.3■□□□□ 0.04
VARS2-210ENST00000490699 CDCA8Q53HL2 280 aa15.29■□□□□ 0.04
VARS2-210ENST00000490699 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
VARS2-210ENST00000490699 TMF1P82094 1093 aa15.28■□□□□ 0.04
VARS2-210ENST00000490699 SAFB2Q14151 953 aaKnown RBP eCLIP15.28■□□□□ 0.04
VARS2-210ENST00000490699 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
VARS2-210ENST00000490699 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.04
VARS2-210ENST00000490699 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
VARS2-210ENST00000490699 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
VARS2-210ENST00000490699 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
VARS2-210ENST00000490699 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
VARS2-210ENST00000490699 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
VARS2-210ENST00000490699 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
VARS2-210ENST00000490699 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
VARS2-210ENST00000490699 STRCP1A6NGW2 1772 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
VARS2-210ENST00000490699 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 ADGRB2O60241 1585 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 MSH6P52701 1360 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
VARS2-210ENST00000490699 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
VARS2-210ENST00000490699 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.03
VARS2-210ENST00000490699 ATF3P18847 181 aa15.2■□□□□ 0.02
VARS2-210ENST00000490699 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
VARS2-210ENST00000490699 TESK2Q96S53 571 aa15.19■□□□□ 0.02
VARS2-210ENST00000490699 C19orf44Q9H6X5 657 aa15.19■□□□□ 0.02
VARS2-210ENST00000490699 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
VARS2-210ENST00000490699 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
VARS2-210ENST00000490699 DCCP43146 1447 aa15.18■□□□□ 0.02
VARS2-210ENST00000490699 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.18■□□□□ 0.02
VARS2-210ENST00000490699 WASLO00401 505 aaPredicted RBP15.18■□□□□ 0.02
VARS2-210ENST00000490699 ATAD2Q6PL18 1390 aa15.18■□□□□ 0.02
VARS2-210ENST00000490699 CAPN15O75808 1086 aa15.17■□□□□ 0.02
VARS2-210ENST00000490699 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
VARS2-210ENST00000490699 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
VARS2-210ENST00000490699 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
VARS2-210ENST00000490699 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
VARS2-210ENST00000490699 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
VARS2-210ENST00000490699 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
VARS2-210ENST00000490699 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
VARS2-210ENST00000490699 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
VARS2-210ENST00000490699 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
VARS2-210ENST00000490699 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
VARS2-210ENST00000490699 ANKARQ7Z5J8 1434 aa15.14■□□□□ 0.01
VARS2-210ENST00000490699 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
VARS2-210ENST00000490699 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
VARS2-210ENST00000490699 CABP2Q9NPB3 220 aa15.13■□□□□ 0.01
VARS2-210ENST00000490699 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
VARS2-210ENST00000490699 KIF7Q2M1P5 1343 aa15.13■□□□□ 0.01
VARS2-210ENST00000490699 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
VARS2-210ENST00000490699 IQSEC2Q5JU85 1478 aa15.12■□□□□ 0.01
VARS2-210ENST00000490699 XIRP1Q702N8 1843 aaKnown RBP15.12■□□□□ 0.01
VARS2-210ENST00000490699 CCDC61Q9Y6R9 512 aa15.11■□□□□ 0.01
VARS2-210ENST00000490699 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
VARS2-210ENST00000490699 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
VARS2-210ENST00000490699 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
VARS2-210ENST00000490699 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
VARS2-210ENST00000490699 TERF2IPQ9NYB0 399 aa15.09■□□□□ 0.01
VARS2-210ENST00000490699 PPIP5K1Q6PFW1 1433 aa15.09■□□□□ 0.01
VARS2-210ENST00000490699 ATP7BP35670 1465 aa15.08■□□□□ 0.01
VARS2-210ENST00000490699 KCNA4P22459 653 aa15.08■□□□□ 0
VARS2-210ENST00000490699 TOM1O60784 492 aa15.07■□□□□ 0
VARS2-210ENST00000490699 ESCO1Q5FWF5 840 aa15.07■□□□□ 0
VARS2-210ENST00000490699 KIF1AQ12756 1690 aa15.06■□□□□ 0
VARS2-210ENST00000490699 C11orf95C9JLR9 678 aaPredicted RBP15.06■□□□□ 0
VARS2-210ENST00000490699 CERKQ8TCT0 537 aa15.06■□□□□ 0
VARS2-210ENST00000490699 TOPAZ1Q8N9V7 1692 aa15.06■□□□□ 0
VARS2-210ENST00000490699 NGDNQ8NEJ9 315 aaKnown RBP15.05■□□□□ -0
VARS2-210ENST00000490699 MST1RQ04912 1400 aa15.05■□□□□ -0
VARS2-210ENST00000490699 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
VARS2-210ENST00000490699 CABP1Q9NZU7 370 aa15.04■□□□□ -0
VARS2-210ENST00000490699 SLAIN2Q9P270 581 aa15.04■□□□□ -0
VARS2-210ENST00000490699 PHF8Q9UPP1 1060 aa15.04■□□□□ -0
VARS2-210ENST00000490699 MYOM1P52179 1685 aa15.03■□□□□ -0
VARS2-210ENST00000490699 USP32Q8NFA0 1604 aa15.03■□□□□ -0
VARS2-210ENST00000490699 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
VARS2-210ENST00000490699 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
VARS2-210ENST00000490699 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
VARS2-210ENST00000490699 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
VARS2-210ENST00000490699 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
VARS2-210ENST00000490699 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
VARS2-210ENST00000490699 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
VARS2-210ENST00000490699 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
VARS2-210ENST00000490699 PLEKHG3A1L390 1219 aa15.01□□□□□ -0.01
VARS2-210ENST00000490699 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
VARS2-210ENST00000490699 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
VARS2-210ENST00000490699 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
VARS2-210ENST00000490699 PSME1Q06323 249 aa15□□□□□ -0.01
VARS2-210ENST00000490699 PANK3Q9H999 370 aa15□□□□□ -0.01
VARS2-210ENST00000490699 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
VARS2-210ENST00000490699 ACEP12821 1306 aa14.99□□□□□ -0.01
VARS2-210ENST00000490699 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
VARS2-210ENST00000490699 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms