RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 FLIIQ13045 1269 aa11.68□□□□□ -0.54
VPS26A-206ENST00000489794 MTMR2Q13614 643 aa11.68□□□□□ -0.54
VPS26A-206ENST00000489794 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
VPS26A-206ENST00000489794 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
VPS26A-206ENST00000489794 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
VPS26A-206ENST00000489794 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
VPS26A-206ENST00000489794 HRCP23327 699 aa11.66□□□□□ -0.54
VPS26A-206ENST00000489794 PUS10Q3MIT2 529 aaKnown RBP11.66□□□□□ -0.54
VPS26A-206ENST00000489794 SLC27A5Q9Y2P5 690 aa11.66□□□□□ -0.54
VPS26A-206ENST00000489794 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
VPS26A-206ENST00000489794 RFC5P40937 340 aa11.65□□□□□ -0.54
VPS26A-206ENST00000489794 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
VPS26A-206ENST00000489794 QPCTQ16769 361 aa11.65□□□□□ -0.54
VPS26A-206ENST00000489794 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
VPS26A-206ENST00000489794 HLA-CQ95604 372 aa11.64□□□□□ -0.55
VPS26A-206ENST00000489794 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-206ENST00000489794 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
VPS26A-206ENST00000489794 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
VPS26A-206ENST00000489794 RGS20O76081 388 aa11.62□□□□□ -0.55
VPS26A-206ENST00000489794 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-206ENST00000489794 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
VPS26A-206ENST00000489794 HELBQ8NG08 1087 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-206ENST00000489794 CABLES1Q8TDN4 633 aa11.6□□□□□ -0.55
VPS26A-206ENST00000489794 A0A0G2JS52 829 aa11.59□□□□□ -0.55
VPS26A-206ENST00000489794 APBB1O00213 710 aa11.59□□□□□ -0.55
VPS26A-206ENST00000489794 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-206ENST00000489794 DESI1Q6ICB0 168 aa11.59□□□□□ -0.55
VPS26A-206ENST00000489794 BRICD5Q6PL45 260 aa11.59□□□□□ -0.55
VPS26A-206ENST00000489794 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
VPS26A-206ENST00000489794 IL21Q9HBE4 155 aa11.59□□□□□ -0.55
VPS26A-206ENST00000489794 SOCS7O14512 581 aa11.58□□□□□ -0.56
VPS26A-206ENST00000489794 ZPR1O75312 459 aa11.57□□□□□ -0.56
VPS26A-206ENST00000489794 COPS2P61201 443 aa11.57□□□□□ -0.56
VPS26A-206ENST00000489794 THAP11Q96EK4 314 aa11.57□□□□□ -0.56
VPS26A-206ENST00000489794 MTRQ99707 1265 aa11.57□□□□□ -0.56
VPS26A-206ENST00000489794 KCNC4Q03721 635 aa11.56□□□□□ -0.56
VPS26A-206ENST00000489794 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
VPS26A-206ENST00000489794 PRR7Q8TB68 274 aa11.56□□□□□ -0.56
VPS26A-206ENST00000489794 AP1G2O75843 785 aa11.55□□□□□ -0.56
VPS26A-206ENST00000489794 MSS51Q4VC12 460 aa11.54□□□□□ -0.56
VPS26A-206ENST00000489794 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
VPS26A-206ENST00000489794 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-206ENST00000489794 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
VPS26A-206ENST00000489794 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
VPS26A-206ENST00000489794 SPSB2Q99619 263 aa11.54□□□□□ -0.56
VPS26A-206ENST00000489794 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
VPS26A-206ENST00000489794 MCM6Q14566 821 aa11.53□□□□□ -0.56
VPS26A-206ENST00000489794 ADH1BP00325 375 aa11.52□□□□□ -0.57
VPS26A-206ENST00000489794 TSC1Q92574 1164 aa11.52□□□□□ -0.57
VPS26A-206ENST00000489794 PRM3Q9NNZ6 103 aa11.52□□□□□ -0.57
VPS26A-206ENST00000489794 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
VPS26A-206ENST00000489794 JUNDP17535 347 aa11.48□□□□□ -0.57
VPS26A-206ENST00000489794 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
VPS26A-206ENST00000489794 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
VPS26A-206ENST00000489794 LYPD8Q6UX82 237 aa11.47□□□□□ -0.57
VPS26A-206ENST00000489794 MMP16P51512 607 aa11.46□□□□□ -0.57
VPS26A-206ENST00000489794 PTPRNQ16849 979 aa11.46□□□□□ -0.57
VPS26A-206ENST00000489794 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
VPS26A-206ENST00000489794 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
VPS26A-206ENST00000489794 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
VPS26A-206ENST00000489794 RAD21O60216 631 aa11.45□□□□□ -0.58
VPS26A-206ENST00000489794 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
VPS26A-206ENST00000489794 ZNF516Q92618 1163 aa11.45□□□□□ -0.58
VPS26A-206ENST00000489794 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
VPS26A-206ENST00000489794 TLL1O43897 1013 aa11.44□□□□□ -0.58
VPS26A-206ENST00000489794 MTMR14Q8NCE2 650 aa11.44□□□□□ -0.58
VPS26A-206ENST00000489794 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
VPS26A-206ENST00000489794 ZMYND15Q9H091 742 aa11.42□□□□□ -0.58
VPS26A-206ENST00000489794 GGCXP38435 758 aa11.41□□□□□ -0.58
VPS26A-206ENST00000489794 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-206ENST00000489794 A6NJR5 290 aa11.4□□□□□ -0.58
VPS26A-206ENST00000489794 CCNYL3P0C7X3 344 aa11.4□□□□□ -0.58
VPS26A-206ENST00000489794 WWC1Q8IX03 1113 aa11.4□□□□□ -0.58
VPS26A-206ENST00000489794 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
VPS26A-206ENST00000489794 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
VPS26A-206ENST00000489794 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
VPS26A-206ENST00000489794 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-206ENST00000489794 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
VPS26A-206ENST00000489794 GJD4Q96KN9 370 aaPredicted RBP11.37□□□□□ -0.59
VPS26A-206ENST00000489794 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
VPS26A-206ENST00000489794 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
VPS26A-206ENST00000489794 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-206ENST00000489794 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
VPS26A-206ENST00000489794 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-206ENST00000489794 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
VPS26A-206ENST00000489794 S1PR4O95977 384 aa11.35□□□□□ -0.59
VPS26A-206ENST00000489794 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
VPS26A-206ENST00000489794 CTHP32929 405 aa11.34□□□□□ -0.59
VPS26A-206ENST00000489794 KCNH2Q12809 1159 aa11.34□□□□□ -0.59
VPS26A-206ENST00000489794 ZC3H4Q9UPT8 1303 aaKnown RBP11.34□□□□□ -0.59
VPS26A-206ENST00000489794 NR6A1Q15406 480 aa11.32□□□□□ -0.6
VPS26A-206ENST00000489794 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-206ENST00000489794 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
VPS26A-206ENST00000489794 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
VPS26A-206ENST00000489794 GPKOWQ92917 476 aaPredicted RBP eCLIP11.31□□□□□ -0.6
VPS26A-206ENST00000489794 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
VPS26A-206ENST00000489794 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
VPS26A-206ENST00000489794 FKBPLQ9UIM3 349 aa11.3□□□□□ -0.6
VPS26A-206ENST00000489794 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
VPS26A-206ENST00000489794 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms