RNA–Protein interactions for RNA: ENST00000489752.1

LNP1-203, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5 BASIC

Gene LNP1, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-203ENST00000489752 PPP4R2Q9NY27 417 aa12.02□□□□□ -0.48
LNP1-203ENST00000489752 CENPJQ9HC77 1338 aaPredicted RBP12.02□□□□□ -0.49
LNP1-203ENST00000489752 USP32Q8NFA0 1604 aa12.01□□□□□ -0.49
LNP1-203ENST00000489752 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
LNP1-203ENST00000489752 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
LNP1-203ENST00000489752 MYO5BQ9ULV0 1848 aa12□□□□□ -0.49
LNP1-203ENST00000489752 PPP2R1AP30153 589 aa12□□□□□ -0.49
LNP1-203ENST00000489752 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
LNP1-203ENST00000489752 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
LNP1-203ENST00000489752 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
LNP1-203ENST00000489752 IDI1Q13907 227 aa11.97□□□□□ -0.49
LNP1-203ENST00000489752 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.49
LNP1-203ENST00000489752 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
LNP1-203ENST00000489752 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
LNP1-203ENST00000489752 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
LNP1-203ENST00000489752 CARD14Q9BXL6 1004 aa11.93□□□□□ -0.5
LNP1-203ENST00000489752 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
LNP1-203ENST00000489752 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
LNP1-203ENST00000489752 TMEM132EQ6IEE7 984 aa11.92□□□□□ -0.5
LNP1-203ENST00000489752 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
LNP1-203ENST00000489752 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
LNP1-203ENST00000489752 EVC2Q86UK5 1308 aa11.91□□□□□ -0.5
LNP1-203ENST00000489752 PTPRMP28827 1452 aa11.91□□□□□ -0.5
LNP1-203ENST00000489752 POLR3AO14802 1390 aaPredicted RBP11.91□□□□□ -0.5
LNP1-203ENST00000489752 NSD2O96028 1365 aa11.9□□□□□ -0.5
LNP1-203ENST00000489752 ANKRD36BQ8N2N9 1353 aa11.9□□□□□ -0.5
LNP1-203ENST00000489752 ALKQ9UM73 1620 aa11.9□□□□□ -0.5
LNP1-203ENST00000489752 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
LNP1-203ENST00000489752 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
LNP1-203ENST00000489752 RCAN3Q9UKA8 241 aa11.9□□□□□ -0.5
LNP1-203ENST00000489752 ZNF521Q96K83 1311 aa11.89□□□□□ -0.51
LNP1-203ENST00000489752 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
LNP1-203ENST00000489752 YTHDC2Q9H6S0 1430 aaKnown RBP11.89□□□□□ -0.51
LNP1-203ENST00000489752 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
LNP1-203ENST00000489752 SHPRHQ149N8 1683 aa11.89□□□□□ -0.51
LNP1-203ENST00000489752 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
LNP1-203ENST00000489752 CAPN15O75808 1086 aa11.88□□□□□ -0.51
LNP1-203ENST00000489752 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
LNP1-203ENST00000489752 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
LNP1-203ENST00000489752 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
LNP1-203ENST00000489752 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
LNP1-203ENST00000489752 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
LNP1-203ENST00000489752 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
LNP1-203ENST00000489752 SLC12A5Q9H2X9 1139 aa11.86□□□□□ -0.51
LNP1-203ENST00000489752 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
LNP1-203ENST00000489752 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
LNP1-203ENST00000489752 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
LNP1-203ENST00000489752 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
LNP1-203ENST00000489752 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
LNP1-203ENST00000489752 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
LNP1-203ENST00000489752 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
LNP1-203ENST00000489752 MED14O60244 1454 aa11.84□□□□□ -0.51
LNP1-203ENST00000489752 MORC1Q86VD1 984 aa11.83□□□□□ -0.51
LNP1-203ENST00000489752 NRXN3Q9Y4C0 1643 aa11.83□□□□□ -0.51
LNP1-203ENST00000489752 ADAMTSL3P82987 1691 aa11.83□□□□□ -0.52
LNP1-203ENST00000489752 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
LNP1-203ENST00000489752 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
LNP1-203ENST00000489752 KNDC1Q76NI1 1749 aa11.83□□□□□ -0.52
LNP1-203ENST00000489752 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
LNP1-203ENST00000489752 ERICH6Q7L0X2 663 aa11.82□□□□□ -0.52
LNP1-203ENST00000489752 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
LNP1-203ENST00000489752 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
LNP1-203ENST00000489752 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
LNP1-203ENST00000489752 TRMT2AQ8IZ69 625 aaKnown RBP11.81□□□□□ -0.52
LNP1-203ENST00000489752 IQSEC2Q5JU85 1478 aa11.81□□□□□ -0.52
LNP1-203ENST00000489752 CD163L1Q9NR16 1453 aa11.81□□□□□ -0.52
LNP1-203ENST00000489752 ZMYM3Q14202 1370 aa11.8□□□□□ -0.52
LNP1-203ENST00000489752 SLFN5Q08AF3 891 aa11.8□□□□□ -0.52
LNP1-203ENST00000489752 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
LNP1-203ENST00000489752 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
LNP1-203ENST00000489752 NLRP1Q9C000 1473 aa11.79□□□□□ -0.52
LNP1-203ENST00000489752 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.79□□□□□ -0.52
LNP1-203ENST00000489752 STK26Q9P289 416 aa11.79□□□□□ -0.52
LNP1-203ENST00000489752 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
LNP1-203ENST00000489752 UBR1Q8IWV7 1749 aa11.79□□□□□ -0.52
LNP1-203ENST00000489752 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
LNP1-203ENST00000489752 POGKQ9P215 609 aa11.79□□□□□ -0.52
LNP1-203ENST00000489752 ATP7BP35670 1465 aa11.78□□□□□ -0.52
LNP1-203ENST00000489752 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
LNP1-203ENST00000489752 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
LNP1-203ENST00000489752 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
LNP1-203ENST00000489752 TECPR2O15040 1411 aa11.78□□□□□ -0.52
LNP1-203ENST00000489752 ADGRB2O60241 1585 aa11.77□□□□□ -0.52
LNP1-203ENST00000489752 E9PSI1 815 aa11.77□□□□□ -0.52
LNP1-203ENST00000489752 APAF1O14727 1248 aa11.77□□□□□ -0.52
LNP1-203ENST00000489752 CCDC146Q8IYE0 955 aa11.77□□□□□ -0.52
LNP1-203ENST00000489752 EXOC6Q8TAG9 804 aa11.77□□□□□ -0.52
LNP1-203ENST00000489752 TNRQ92752 1358 aa11.77□□□□□ -0.53
LNP1-203ENST00000489752 CPS1P31327 1500 aa11.77□□□□□ -0.53
LNP1-203ENST00000489752 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
LNP1-203ENST00000489752 COL3A1P02461 1466 aaPredicted RBP11.76□□□□□ -0.53
LNP1-203ENST00000489752 SAFB2Q14151 953 aaKnown RBP eCLIP11.76□□□□□ -0.53
LNP1-203ENST00000489752 MLECQ14165 292 aa11.76□□□□□ -0.53
LNP1-203ENST00000489752 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
LNP1-203ENST00000489752 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
LNP1-203ENST00000489752 MTHFSP49914 203 aa11.75□□□□□ -0.53
LNP1-203ENST00000489752 POLA2Q14181 598 aa11.75□□□□□ -0.53
LNP1-203ENST00000489752 RUNDC1Q96C34 613 aa11.75□□□□□ -0.53
LNP1-203ENST00000489752 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
LNP1-203ENST00000489752 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms