RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 NOS1P29475 1434 aa11.64□□□□□ -0.55
GABRE-210ENST00000489333 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
GABRE-210ENST00000489333 PRAG1Q86YV5 1406 aa11.63□□□□□ -0.55
GABRE-210ENST00000489333 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
GABRE-210ENST00000489333 TMEM94Q12767 1356 aa11.63□□□□□ -0.55
GABRE-210ENST00000489333 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
GABRE-210ENST00000489333 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
GABRE-210ENST00000489333 ROBO1Q9Y6N7 1651 aa11.62□□□□□ -0.55
GABRE-210ENST00000489333 KCNA6P17658 529 aa11.61□□□□□ -0.55
GABRE-210ENST00000489333 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
GABRE-210ENST00000489333 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
GABRE-210ENST00000489333 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
GABRE-210ENST00000489333 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
GABRE-210ENST00000489333 NWD1Q149M9 1564 aa11.61□□□□□ -0.55
GABRE-210ENST00000489333 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
GABRE-210ENST00000489333 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
GABRE-210ENST00000489333 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
GABRE-210ENST00000489333 DCAF11Q8TEB1 546 aa11.6□□□□□ -0.55
GABRE-210ENST00000489333 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
GABRE-210ENST00000489333 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
GABRE-210ENST00000489333 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
GABRE-210ENST00000489333 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
GABRE-210ENST00000489333 NUDCQ9Y266 331 aa11.59□□□□□ -0.55
GABRE-210ENST00000489333 NKTRP30414 1462 aaKnown RBP11.58□□□□□ -0.56
GABRE-210ENST00000489333 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
GABRE-210ENST00000489333 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
GABRE-210ENST00000489333 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
GABRE-210ENST00000489333 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
GABRE-210ENST00000489333 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 ANP32EQ9BTT0 268 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 ZFYVE9O95405 1425 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
GABRE-210ENST00000489333 MSH6P52701 1360 aa11.56□□□□□ -0.56
GABRE-210ENST00000489333 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
GABRE-210ENST00000489333 NUTM2DQ5VT03 806 aaPredicted RBP11.56□□□□□ -0.56
GABRE-210ENST00000489333 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
GABRE-210ENST00000489333 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
GABRE-210ENST00000489333 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
GABRE-210ENST00000489333 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
GABRE-210ENST00000489333 TMF1P82094 1093 aa11.55□□□□□ -0.56
GABRE-210ENST00000489333 TRPM2O94759 1503 aa11.55□□□□□ -0.56
GABRE-210ENST00000489333 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
GABRE-210ENST00000489333 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
GABRE-210ENST00000489333 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
GABRE-210ENST00000489333 EIF3AQ14152 1382 aaKnown RBP11.53□□□□□ -0.56
GABRE-210ENST00000489333 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.56
GABRE-210ENST00000489333 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
GABRE-210ENST00000489333 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.52□□□□□ -0.57
GABRE-210ENST00000489333 DIP2AQ14689 1571 aa11.51□□□□□ -0.57
GABRE-210ENST00000489333 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
GABRE-210ENST00000489333 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
GABRE-210ENST00000489333 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.51□□□□□ -0.57
GABRE-210ENST00000489333 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
GABRE-210ENST00000489333 TBX22Q9Y458 520 aa11.5□□□□□ -0.57
GABRE-210ENST00000489333 NPC1L1Q9UHC9 1359 aa11.5□□□□□ -0.57
GABRE-210ENST00000489333 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
GABRE-210ENST00000489333 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
GABRE-210ENST00000489333 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
GABRE-210ENST00000489333 POTEAQ6S8J7 498 aa11.48□□□□□ -0.57
GABRE-210ENST00000489333 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
GABRE-210ENST00000489333 NRXN3Q9Y4C0 1643 aa11.47□□□□□ -0.57
GABRE-210ENST00000489333 JCADQ9P266 1359 aa11.47□□□□□ -0.57
GABRE-210ENST00000489333 MYOM2P54296 1465 aa11.46□□□□□ -0.57
GABRE-210ENST00000489333 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
GABRE-210ENST00000489333 ATF3P18847 181 aa11.46□□□□□ -0.57
GABRE-210ENST00000489333 KIF1BO60333 1816 aa11.46□□□□□ -0.58
GABRE-210ENST00000489333 BLMP54132 1417 aaPredicted RBP11.45□□□□□ -0.58
GABRE-210ENST00000489333 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 TESK2Q96S53 571 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
GABRE-210ENST00000489333 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
GABRE-210ENST00000489333 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 ERICH6Q7L0X2 663 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
GABRE-210ENST00000489333 C19orf44Q9H6X5 657 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
GABRE-210ENST00000489333 SETBP1Q9Y6X0 1596 aa11.44□□□□□ -0.58
GABRE-210ENST00000489333 LRP6O75581 1613 aa11.43□□□□□ -0.58
GABRE-210ENST00000489333 MEX3CQ5U5Q3 659 aaKnown RBP11.43□□□□□ -0.58
GABRE-210ENST00000489333 RGL3Q3MIN7 710 aa11.42□□□□□ -0.58
GABRE-210ENST00000489333 SBNO2Q9Y2G9 1366 aa11.41□□□□□ -0.58
GABRE-210ENST00000489333 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
GABRE-210ENST00000489333 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
GABRE-210ENST00000489333 PIK3C2GO75747 1445 aa11.41□□□□□ -0.58
GABRE-210ENST00000489333 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
GABRE-210ENST00000489333 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
GABRE-210ENST00000489333 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
GABRE-210ENST00000489333 RCAN3Q9UKA8 241 aa11.4□□□□□ -0.58
GABRE-210ENST00000489333 METP08581 1390 aa11.4□□□□□ -0.59
GABRE-210ENST00000489333 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.59
GABRE-210ENST00000489333 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
GABRE-210ENST00000489333 NUTM2BA6NNL0 878 aaPredicted RBP11.39□□□□□ -0.59
GABRE-210ENST00000489333 NUTM2EB1AL46 878 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms