RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 ATP10BO94823 1461 aa10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
TNFSF4-203ENST00000488053 KIF21BO75037 1637 aa10.59□□□□□ -0.71
TNFSF4-203ENST00000488053 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
TNFSF4-203ENST00000488053 RAPGEF6Q8TEU7 1601 aa10.58□□□□□ -0.72
TNFSF4-203ENST00000488053 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
TNFSF4-203ENST00000488053 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
TNFSF4-203ENST00000488053 EYA1Q99502 592 aa10.58□□□□□ -0.72
TNFSF4-203ENST00000488053 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
TNFSF4-203ENST00000488053 TRIM66O15016 1216 aa10.57□□□□□ -0.72
TNFSF4-203ENST00000488053 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
TNFSF4-203ENST00000488053 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
TNFSF4-203ENST00000488053 HRO43593 1189 aa10.56□□□□□ -0.72
TNFSF4-203ENST00000488053 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
TNFSF4-203ENST00000488053 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
TNFSF4-203ENST00000488053 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
TNFSF4-203ENST00000488053 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
TNFSF4-203ENST00000488053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
TNFSF4-203ENST00000488053 C3orf80F5H4A9 247 aa10.55□□□□□ -0.72
TNFSF4-203ENST00000488053 SMAPO00193 183 aa10.55□□□□□ -0.72
TNFSF4-203ENST00000488053 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
TNFSF4-203ENST00000488053 DNAJB2P25686 324 aa10.54□□□□□ -0.72
TNFSF4-203ENST00000488053 AMHR2Q16671 573 aa10.54□□□□□ -0.72
TNFSF4-203ENST00000488053 NUP153P49790 1475 aaKnown RBP10.54□□□□□ -0.72
TNFSF4-203ENST00000488053 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
TNFSF4-203ENST00000488053 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
TNFSF4-203ENST00000488053 RAPGEF3O95398 923 aa10.52□□□□□ -0.73
TNFSF4-203ENST00000488053 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
TNFSF4-203ENST00000488053 EEA1Q15075 1411 aa10.51□□□□□ -0.73
TNFSF4-203ENST00000488053 CLCN1P35523 988 aa10.51□□□□□ -0.73
TNFSF4-203ENST00000488053 PDE4DQ08499 809 aa10.51□□□□□ -0.73
TNFSF4-203ENST00000488053 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
TNFSF4-203ENST00000488053 HDGFP51858 240 aaKnown RBP10.5□□□□□ -0.73
TNFSF4-203ENST00000488053 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
TNFSF4-203ENST00000488053 TMEM134Q9H6X4 195 aa10.5□□□□□ -0.73
TNFSF4-203ENST00000488053 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
TNFSF4-203ENST00000488053 NEO1Q92859 1461 aa10.49□□□□□ -0.73
TNFSF4-203ENST00000488053 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
TNFSF4-203ENST00000488053 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
TNFSF4-203ENST00000488053 GPCPD1Q9NPB8 672 aa10.48□□□□□ -0.73
TNFSF4-203ENST00000488053 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 SLC4A3P48751 1232 aa10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 PHLDB1Q86UU1 1377 aa10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 ADAMTSL3P82987 1691 aa10.47□□□□□ -0.73
TNFSF4-203ENST00000488053 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.73
TNFSF4-203ENST00000488053 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
TNFSF4-203ENST00000488053 NLRP7Q8WX94 980 aa10.46□□□□□ -0.73
TNFSF4-203ENST00000488053 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
TNFSF4-203ENST00000488053 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
TNFSF4-203ENST00000488053 CDK13Q14004 1512 aaKnown RBP10.46□□□□□ -0.74
TNFSF4-203ENST00000488053 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.74
TNFSF4-203ENST00000488053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
TNFSF4-203ENST00000488053 UBTFP17480 764 aaKnown RBP10.45□□□□□ -0.74
TNFSF4-203ENST00000488053 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
TNFSF4-203ENST00000488053 TMUB1Q9BVT8 246 aa10.45□□□□□ -0.74
TNFSF4-203ENST00000488053 BCORL1Q5H9F3 1711 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 RICTORQ6R327 1708 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 FANCAO15360 1455 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 PTPRMP28827 1452 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 SWT1Q5T5J6 900 aaKnown RBP10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 SAMD7Q7Z3H4 446 aa10.44□□□□□ -0.74
TNFSF4-203ENST00000488053 DENND4BO75064 1496 aaPredicted RBP10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 CFAP74Q9C0B2 1584 aa10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
TNFSF4-203ENST00000488053 RIMS1Q86UR5 1692 aaKnown RBP10.42□□□□□ -0.74
TNFSF4-203ENST00000488053 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
TNFSF4-203ENST00000488053 WNT2BQ93097 391 aa10.42□□□□□ -0.74
TNFSF4-203ENST00000488053 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
TNFSF4-203ENST00000488053 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
TNFSF4-203ENST00000488053 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
TNFSF4-203ENST00000488053 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 GPBP1L1Q9HC44 474 aaPredicted RBP10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 SIGLEC1Q9BZZ2 1709 aa10.4□□□□□ -0.74
TNFSF4-203ENST00000488053 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
TNFSF4-203ENST00000488053 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
TNFSF4-203ENST00000488053 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
TNFSF4-203ENST00000488053 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
TNFSF4-203ENST00000488053 KIF14Q15058 1648 aa10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 RNF40O75150 1001 aa10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 SSTR3P32745 418 aaPredicted RBP10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
TNFSF4-203ENST00000488053 ZFYVE16Q7Z3T8 1539 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms