RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 MTHFSP49914 203 aa17.84■□□□□ 0.45
EPHB4-206ENST00000487222 PSME1Q06323 249 aa17.83■□□□□ 0.45
EPHB4-206ENST00000487222 PDE3AQ14432 1141 aa17.83■□□□□ 0.45
EPHB4-206ENST00000487222 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.45
EPHB4-206ENST00000487222 FAM13BQ9NYF5 915 aa17.83■□□□□ 0.44
EPHB4-206ENST00000487222 HFM1A2PYH4 1435 aa17.83■□□□□ 0.44
EPHB4-206ENST00000487222 TRDNQ13061 729 aa17.83■□□□□ 0.44
EPHB4-206ENST00000487222 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
EPHB4-206ENST00000487222 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
EPHB4-206ENST00000487222 CCDC70Q6NSX1 233 aa17.82■□□□□ 0.44
EPHB4-206ENST00000487222 NESP48681 1621 aa17.82■□□□□ 0.44
EPHB4-206ENST00000487222 EVA1CP58658 441 aa17.82■□□□□ 0.44
EPHB4-206ENST00000487222 CFAP70Q5T0N1 1121 aa17.82■□□□□ 0.44
EPHB4-206ENST00000487222 HOOK1Q9UJC3 728 aaKnown RBP17.81■□□□□ 0.44
EPHB4-206ENST00000487222 IPO7O95373 1038 aaKnown RBP17.81■□□□□ 0.44
EPHB4-206ENST00000487222 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 ANKRD20A12PQ8NF67 263 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
EPHB4-206ENST00000487222 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
EPHB4-206ENST00000487222 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
EPHB4-206ENST00000487222 TRAK2O60296 914 aa17.8■□□□□ 0.44
EPHB4-206ENST00000487222 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
EPHB4-206ENST00000487222 APPP05067 770 aa17.8■□□□□ 0.44
EPHB4-206ENST00000487222 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
EPHB4-206ENST00000487222 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
EPHB4-206ENST00000487222 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
EPHB4-206ENST00000487222 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
EPHB4-206ENST00000487222 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
EPHB4-206ENST00000487222 TROQ12816 1431 aaPredicted RBP17.79■□□□□ 0.44
EPHB4-206ENST00000487222 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
EPHB4-206ENST00000487222 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
EPHB4-206ENST00000487222 C9orf84Q5VXU9 1444 aa17.78■□□□□ 0.44
EPHB4-206ENST00000487222 KIAA1107Q9UPP5 1409 aa17.77■□□□□ 0.44
EPHB4-206ENST00000487222 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.44
EPHB4-206ENST00000487222 ZNF771Q7L3S4 317 aaPredicted RBP17.77■□□□□ 0.44
EPHB4-206ENST00000487222 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.77■□□□□ 0.44
EPHB4-206ENST00000487222 MBD3O95983 291 aa17.77■□□□□ 0.43
EPHB4-206ENST00000487222 GNAI3P08754 354 aa17.77■□□□□ 0.43
EPHB4-206ENST00000487222 PDE4CQ08493 712 aa17.77■□□□□ 0.43
EPHB4-206ENST00000487222 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
EPHB4-206ENST00000487222 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
EPHB4-206ENST00000487222 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
EPHB4-206ENST00000487222 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
EPHB4-206ENST00000487222 MCM2P49736 904 aa17.75■□□□□ 0.43
EPHB4-206ENST00000487222 AMOTL1Q8IY63 956 aa17.75■□□□□ 0.43
EPHB4-206ENST00000487222 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
EPHB4-206ENST00000487222 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
EPHB4-206ENST00000487222 RABEP1Q15276 862 aa17.75■□□□□ 0.43
EPHB4-206ENST00000487222 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 IFT57Q9NWB7 429 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 NBPF8Q3BBV2 869 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 PSMA5P28066 241 aa17.74■□□□□ 0.43
EPHB4-206ENST00000487222 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
EPHB4-206ENST00000487222 TEX35Q5T0J7 233 aa17.73■□□□□ 0.43
EPHB4-206ENST00000487222 CNTROBQ8N137 903 aa17.73■□□□□ 0.43
EPHB4-206ENST00000487222 NOL10Q9BSC4 688 aaKnown RBP17.73■□□□□ 0.43
EPHB4-206ENST00000487222 SAFBQ15424 915 aaKnown RBP eCLIP17.73■□□□□ 0.43
EPHB4-206ENST00000487222 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
EPHB4-206ENST00000487222 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
EPHB4-206ENST00000487222 RAPGEF4Q8WZA2 1011 aa17.73■□□□□ 0.43
EPHB4-206ENST00000487222 PCMTD1Q96MG8 357 aaPredicted RBP17.73■□□□□ 0.43
EPHB4-206ENST00000487222 SETQ01105 290 aaPredicted RBP17.72■□□□□ 0.43
EPHB4-206ENST00000487222 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
EPHB4-206ENST00000487222 ERICH2A1L162 156 aa17.72■□□□□ 0.43
EPHB4-206ENST00000487222 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
EPHB4-206ENST00000487222 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
EPHB4-206ENST00000487222 LETM1O95202 739 aaPredicted RBP17.71■□□□□ 0.43
EPHB4-206ENST00000487222 NEK4P51957 841 aa17.71■□□□□ 0.43
EPHB4-206ENST00000487222 NLRP6P59044 892 aa17.71■□□□□ 0.43
EPHB4-206ENST00000487222 TIAM1Q13009 1591 aa17.71■□□□□ 0.43
EPHB4-206ENST00000487222 RNF214Q8ND24 703 aa17.71■□□□□ 0.43
EPHB4-206ENST00000487222 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
EPHB4-206ENST00000487222 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
EPHB4-206ENST00000487222 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
EPHB4-206ENST00000487222 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
EPHB4-206ENST00000487222 ARGLU1Q9NWB6 273 aaPredicted RBP17.7■□□□□ 0.42
EPHB4-206ENST00000487222 BCAR3O75815 825 aa17.7■□□□□ 0.42
EPHB4-206ENST00000487222 SURF6O75683 361 aaKnown RBP17.7■□□□□ 0.42
EPHB4-206ENST00000487222 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
EPHB4-206ENST00000487222 MTERF4Q7Z6M4 381 aaKnown RBP17.7■□□□□ 0.42
EPHB4-206ENST00000487222 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
EPHB4-206ENST00000487222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
EPHB4-206ENST00000487222 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 MNS1Q8NEH6 495 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 ATF3P18847 181 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 PDCP20941 246 aa17.69■□□□□ 0.42
EPHB4-206ENST00000487222 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 SDF4Q9BRK5 362 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 VPS37DQ86XT2 251 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms