RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 CCER2I3L3R5 266 aa9.89□□□□□ -0.83
CCNB3-206ENST00000487204 LTKP29376 864 aa9.89□□□□□ -0.83
CCNB3-206ENST00000487204 SAMD1Q6SPF0 538 aaPredicted RBP9.89□□□□□ -0.83
CCNB3-206ENST00000487204 FAM135BQ49AJ0 1406 aa9.89□□□□□ -0.83
CCNB3-206ENST00000487204 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
CCNB3-206ENST00000487204 STK26Q9P289 416 aa9.88□□□□□ -0.83
CCNB3-206ENST00000487204 TECPR2O15040 1411 aa9.88□□□□□ -0.83
CCNB3-206ENST00000487204 NINLQ9Y2I6 1382 aa9.88□□□□□ -0.83
CCNB3-206ENST00000487204 ASXL1Q8IXJ9 1541 aa9.87□□□□□ -0.83
CCNB3-206ENST00000487204 MED14O60244 1454 aa9.87□□□□□ -0.83
CCNB3-206ENST00000487204 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
CCNB3-206ENST00000487204 ADAMTS13Q76LX8 1427 aa9.87□□□□□ -0.83
CCNB3-206ENST00000487204 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
CCNB3-206ENST00000487204 SETD1AO15047 1707 aaKnown RBP9.86□□□□□ -0.83
CCNB3-206ENST00000487204 PRAM1Q96QH2 718 aa9.86□□□□□ -0.83
CCNB3-206ENST00000487204 QRICH2Q9H0J4 1663 aa9.86□□□□□ -0.83
CCNB3-206ENST00000487204 METP08581 1390 aa9.86□□□□□ -0.83
CCNB3-206ENST00000487204 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
CCNB3-206ENST00000487204 KNDC1Q76NI1 1749 aa9.85□□□□□ -0.83
CCNB3-206ENST00000487204 CPS1P31327 1500 aa9.84□□□□□ -0.83
CCNB3-206ENST00000487204 RALBP1Q15311 655 aa9.84□□□□□ -0.83
CCNB3-206ENST00000487204 PRKRIP1Q9H875 184 aaPredicted RBP9.84□□□□□ -0.83
CCNB3-206ENST00000487204 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
CCNB3-206ENST00000487204 CAPN15O75808 1086 aa9.83□□□□□ -0.84
CCNB3-206ENST00000487204 PANK3Q9H999 370 aa9.83□□□□□ -0.84
CCNB3-206ENST00000487204 PTCH1Q13635 1447 aa9.82□□□□□ -0.84
CCNB3-206ENST00000487204 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
CCNB3-206ENST00000487204 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
CCNB3-206ENST00000487204 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
CCNB3-206ENST00000487204 NPHP4O75161 1426 aaPredicted RBP9.82□□□□□ -0.84
CCNB3-206ENST00000487204 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
CCNB3-206ENST00000487204 AMOTL2Q9Y2J4 779 aa9.81□□□□□ -0.84
CCNB3-206ENST00000487204 SAFB2Q14151 953 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCNB3-206ENST00000487204 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
CCNB3-206ENST00000487204 TERF2IPQ9NYB0 399 aa9.8□□□□□ -0.84
CCNB3-206ENST00000487204 TULP4Q9NRJ4 1543 aa9.8□□□□□ -0.84
CCNB3-206ENST00000487204 MINK1Q8N4C8 1332 aaPredicted RBP9.8□□□□□ -0.84
CCNB3-206ENST00000487204 ANKRD36BQ8N2N9 1353 aa9.79□□□□□ -0.84
CCNB3-206ENST00000487204 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
CCNB3-206ENST00000487204 WASLO00401 505 aaPredicted RBP9.79□□□□□ -0.84
CCNB3-206ENST00000487204 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
CCNB3-206ENST00000487204 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
CCNB3-206ENST00000487204 CDK19Q9BWU1 502 aa9.79□□□□□ -0.84
CCNB3-206ENST00000487204 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
CCNB3-206ENST00000487204 ZBTB22O15209 634 aa9.78□□□□□ -0.84
CCNB3-206ENST00000487204 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
CCNB3-206ENST00000487204 MYBBP1AQ9BQG0 1328 aaKnown RBP9.78□□□□□ -0.84
CCNB3-206ENST00000487204 NSD2O96028 1365 aa9.77□□□□□ -0.84
CCNB3-206ENST00000487204 ADGRB2O60241 1585 aa9.77□□□□□ -0.85
CCNB3-206ENST00000487204 PTPRUQ92729 1446 aa9.77□□□□□ -0.85
CCNB3-206ENST00000487204 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.85
CCNB3-206ENST00000487204 CABP2Q9NPB3 220 aa9.77□□□□□ -0.85
CCNB3-206ENST00000487204 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
CCNB3-206ENST00000487204 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.85
CCNB3-206ENST00000487204 MYOM1P52179 1685 aa9.77□□□□□ -0.85
CCNB3-206ENST00000487204 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
CCNB3-206ENST00000487204 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
CCNB3-206ENST00000487204 XRN1Q8IZH2 1706 aaKnown RBP9.76□□□□□ -0.85
CCNB3-206ENST00000487204 KCNA6P17658 529 aa9.76□□□□□ -0.85
CCNB3-206ENST00000487204 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
CCNB3-206ENST00000487204 CCDC61Q9Y6R9 512 aa9.76□□□□□ -0.85
CCNB3-206ENST00000487204 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
CCNB3-206ENST00000487204 ATP7BP35670 1465 aa9.75□□□□□ -0.85
CCNB3-206ENST00000487204 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
CCNB3-206ENST00000487204 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
CCNB3-206ENST00000487204 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
CCNB3-206ENST00000487204 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
CCNB3-206ENST00000487204 MRS2Q9HD23 443 aa9.74□□□□□ -0.85
CCNB3-206ENST00000487204 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
CCNB3-206ENST00000487204 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
CCNB3-206ENST00000487204 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
CCNB3-206ENST00000487204 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
CCNB3-206ENST00000487204 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
CCNB3-206ENST00000487204 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
CCNB3-206ENST00000487204 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
CCNB3-206ENST00000487204 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
CCNB3-206ENST00000487204 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
CCNB3-206ENST00000487204 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
CCNB3-206ENST00000487204 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
CCNB3-206ENST00000487204 CABP1Q9NZU7 370 aa9.72□□□□□ -0.85
CCNB3-206ENST00000487204 PPIP5K1Q6PFW1 1433 aa9.72□□□□□ -0.85
CCNB3-206ENST00000487204 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
CCNB3-206ENST00000487204 A0A1W2PP64 1363 aa9.71□□□□□ -0.86
CCNB3-206ENST00000487204 MORC1Q86VD1 984 aa9.7□□□□□ -0.86
CCNB3-206ENST00000487204 CPSF1Q10570 1443 aaKnown RBP9.7□□□□□ -0.86
CCNB3-206ENST00000487204 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
CCNB3-206ENST00000487204 ADGRL3Q9HAR2 1447 aa9.7□□□□□ -0.86
CCNB3-206ENST00000487204 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.7□□□□□ -0.86
CCNB3-206ENST00000487204 INSRP06213 1382 aa9.69□□□□□ -0.86
CCNB3-206ENST00000487204 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
CCNB3-206ENST00000487204 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
CCNB3-206ENST00000487204 YTHDC1Q96MU7 727 aaKnown RBP9.69□□□□□ -0.86
CCNB3-206ENST00000487204 CD163L1Q9NR16 1453 aa9.68□□□□□ -0.86
CCNB3-206ENST00000487204 PPP2R1AP30153 589 aa9.68□□□□□ -0.86
CCNB3-206ENST00000487204 DSG3P32926 999 aa9.68□□□□□ -0.86
CCNB3-206ENST00000487204 HSPA2P54652 639 aa9.68□□□□□ -0.86
CCNB3-206ENST00000487204 CNGB1Q14028 1251 aaPredicted RBP9.68□□□□□ -0.86
CCNB3-206ENST00000487204 C14orf37Q86TY3 774 aa9.68□□□□□ -0.86
CCNB3-206ENST00000487204 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
CCNB3-206ENST00000487204 C19orf44Q9H6X5 657 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms