RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 DNAJB2P25686 324 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 SAMD9Q5K651 1589 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.73
SMARCAL1-212ENST00000486983 CASKIN1Q8WXD9 1431 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 S1PR4O95977 384 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 PRR20EP86478 221 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 PRR20CP86479 221 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 PRR20DP86480 221 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 PRR20BP86481 221 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 PRR20AP86496 221 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
SMARCAL1-212ENST00000486983 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
SMARCAL1-212ENST00000486983 POTECB2RU33 542 aa10.5□□□□□ -0.73
SMARCAL1-212ENST00000486983 DGAT1O75907 488 aa10.5□□□□□ -0.73
SMARCAL1-212ENST00000486983 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-212ENST00000486983 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
SMARCAL1-212ENST00000486983 ACTN4O43707 911 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-212ENST00000486983 ZNF697Q5TEC3 545 aa10.49□□□□□ -0.73
SMARCAL1-212ENST00000486983 CFHP08603 1231 aa10.48□□□□□ -0.73
SMARCAL1-212ENST00000486983 PTGDRQ13258 359 aa10.48□□□□□ -0.73
SMARCAL1-212ENST00000486983 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
SMARCAL1-212ENST00000486983 TNFRSF10AO00220 468 aa10.47□□□□□ -0.73
SMARCAL1-212ENST00000486983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCAL1-212ENST00000486983 SNAPC4Q5SXM2 1469 aa10.47□□□□□ -0.73
SMARCAL1-212ENST00000486983 WDR62O43379 1518 aa10.47□□□□□ -0.73
SMARCAL1-212ENST00000486983 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
SMARCAL1-212ENST00000486983 KMT5BQ4FZB7 885 aa10.46□□□□□ -0.73
SMARCAL1-212ENST00000486983 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-212ENST00000486983 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.74
SMARCAL1-212ENST00000486983 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 ADAMTS12P58397 1594 aa10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 RCCD1A6NED2 376 aa10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 GDF9O60383 454 aa10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
SMARCAL1-212ENST00000486983 IFT140Q96RY7 1462 aa10.44□□□□□ -0.74
SMARCAL1-212ENST00000486983 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-212ENST00000486983 ADH1BP00325 375 aa10.44□□□□□ -0.74
SMARCAL1-212ENST00000486983 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
SMARCAL1-212ENST00000486983 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
SMARCAL1-212ENST00000486983 SLC10A3P09131 477 aa10.42□□□□□ -0.74
SMARCAL1-212ENST00000486983 ST8SIA5O15466 376 aa10.41□□□□□ -0.74
SMARCAL1-212ENST00000486983 PHLDB1Q86UU1 1377 aa10.4□□□□□ -0.74
SMARCAL1-212ENST00000486983 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
SMARCAL1-212ENST00000486983 IQGAP2Q13576 1575 aa10.39□□□□□ -0.75
SMARCAL1-212ENST00000486983 NR1I2O75469 434 aa10.39□□□□□ -0.75
SMARCAL1-212ENST00000486983 KCNV2Q8TDN2 545 aa10.39□□□□□ -0.75
SMARCAL1-212ENST00000486983 ARHGEF1Q92888 912 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-212ENST00000486983 SLC6A16Q9GZN6 736 aa10.39□□□□□ -0.75
SMARCAL1-212ENST00000486983 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
SMARCAL1-212ENST00000486983 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
SMARCAL1-212ENST00000486983 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
SMARCAL1-212ENST00000486983 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-212ENST00000486983 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
SMARCAL1-212ENST00000486983 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
SMARCAL1-212ENST00000486983 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
SMARCAL1-212ENST00000486983 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
SMARCAL1-212ENST00000486983 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
SMARCAL1-212ENST00000486983 SETD5Q9C0A6 1442 aa10.35□□□□□ -0.75
SMARCAL1-212ENST00000486983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-212ENST00000486983 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
SMARCAL1-212ENST00000486983 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
SMARCAL1-212ENST00000486983 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
SMARCAL1-212ENST00000486983 RAB3GAP2Q9H2M9 1393 aa10.34□□□□□ -0.75
SMARCAL1-212ENST00000486983 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-212ENST00000486983 EIF4G3O43432 1585 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-212ENST00000486983 LRRIQ1Q96JM4 1722 aa10.33□□□□□ -0.76
SMARCAL1-212ENST00000486983 MAPKBP1O60336 1514 aa10.33□□□□□ -0.76
SMARCAL1-212ENST00000486983 KIAA0586Q9BVV6 1533 aa10.33□□□□□ -0.76
SMARCAL1-212ENST00000486983 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 FOXC1Q12948 553 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
SMARCAL1-212ENST00000486983 NCOA2Q15596 1464 aa10.31□□□□□ -0.76
SMARCAL1-212ENST00000486983 SPSB2Q99619 263 aa10.31□□□□□ -0.76
SMARCAL1-212ENST00000486983 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
SMARCAL1-212ENST00000486983 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-212ENST00000486983 FCHSD2O94868 740 aa10.3□□□□□ -0.76
SMARCAL1-212ENST00000486983 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
SMARCAL1-212ENST00000486983 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-212ENST00000486983 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
SMARCAL1-212ENST00000486983 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
SMARCAL1-212ENST00000486983 KIAA0556O60303 1618 aa10.29□□□□□ -0.76
SMARCAL1-212ENST00000486983 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-212ENST00000486983 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
SMARCAL1-212ENST00000486983 AKNAQ7Z591 1439 aa10.28□□□□□ -0.76
SMARCAL1-212ENST00000486983 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
SMARCAL1-212ENST00000486983 TIMELESSQ9UNS1 1208 aa10.27□□□□□ -0.77
SMARCAL1-212ENST00000486983 MAGI3Q5TCQ9 1506 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms