RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 KANK1Q14678 1352 aa9.95□□□□□ -0.82
CTDSPL-208ENST00000486978 MYOM2P54296 1465 aa9.95□□□□□ -0.82
CTDSPL-208ENST00000486978 C1orf167Q5SNV9 1468 aa9.95□□□□□ -0.82
CTDSPL-208ENST00000486978 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.95□□□□□ -0.82
CTDSPL-208ENST00000486978 DAPK1P53355 1430 aa9.94□□□□□ -0.82
CTDSPL-208ENST00000486978 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-208ENST00000486978 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-208ENST00000486978 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-208ENST00000486978 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
CTDSPL-208ENST00000486978 METP08581 1390 aa9.93□□□□□ -0.82
CTDSPL-208ENST00000486978 ADGRL3Q9HAR2 1447 aa9.92□□□□□ -0.82
CTDSPL-208ENST00000486978 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-208ENST00000486978 SEPT12Q8IYM1 358 aa9.92□□□□□ -0.82
CTDSPL-208ENST00000486978 CHIC2Q9UKJ5 165 aa9.92□□□□□ -0.82
CTDSPL-208ENST00000486978 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
CTDSPL-208ENST00000486978 NPM3O75607 178 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-208ENST00000486978 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTDSPL-208ENST00000486978 HDGFP51858 240 aaKnown RBP9.9□□□□□ -0.82
CTDSPL-208ENST00000486978 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
CTDSPL-208ENST00000486978 UNC5CLQ8IV45 518 aa9.9□□□□□ -0.82
CTDSPL-208ENST00000486978 SLIT2O94813 1529 aa9.9□□□□□ -0.82
CTDSPL-208ENST00000486978 ANKRD30AQ9BXX3 1397 aa9.89□□□□□ -0.83
CTDSPL-208ENST00000486978 XPCQ01831 940 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL-208ENST00000486978 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-208ENST00000486978 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
CTDSPL-208ENST00000486978 E9PCH4 1651 aa9.89□□□□□ -0.83
CTDSPL-208ENST00000486978 ADGRL2O95490 1459 aa9.88□□□□□ -0.83
CTDSPL-208ENST00000486978 PXDNQ92626 1479 aa9.88□□□□□ -0.83
CTDSPL-208ENST00000486978 RPRD2Q5VT52 1461 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-208ENST00000486978 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-208ENST00000486978 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
CTDSPL-208ENST00000486978 TNS1Q9HBL0 1735 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-208ENST00000486978 BAG6P46379 1132 aa9.86□□□□□ -0.83
CTDSPL-208ENST00000486978 EZH2Q15910 746 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-208ENST00000486978 SENP3-EIF4A1A0A087X0R7 540 aa9.85□□□□□ -0.83
CTDSPL-208ENST00000486978 PLCH1Q4KWH8 1693 aa9.85□□□□□ -0.83
CTDSPL-208ENST00000486978 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
CTDSPL-208ENST00000486978 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
CTDSPL-208ENST00000486978 ROBO2Q9HCK4 1378 aa9.84□□□□□ -0.83
CTDSPL-208ENST00000486978 VPS72Q15906 364 aa9.83□□□□□ -0.84
CTDSPL-208ENST00000486978 PPARGC1BQ86YN6 1023 aaKnown RBP9.83□□□□□ -0.84
CTDSPL-208ENST00000486978 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
CTDSPL-208ENST00000486978 FOXO3O43524 673 aa9.82□□□□□ -0.84
CTDSPL-208ENST00000486978 CAMKK2Q96RR4 588 aa9.82□□□□□ -0.84
CTDSPL-208ENST00000486978 ANKRD50Q9ULJ7 1429 aa9.82□□□□□ -0.84
CTDSPL-208ENST00000486978 ROCK1Q13464 1354 aa9.81□□□□□ -0.84
CTDSPL-208ENST00000486978 CABLES1Q8TDN4 633 aa9.81□□□□□ -0.84
CTDSPL-208ENST00000486978 IQGAP3Q86VI3 1631 aa9.81□□□□□ -0.84
CTDSPL-208ENST00000486978 NUP188Q5SRE5 1749 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 NRAPQ86VF7 1730 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 NWD2Q9ULI1 1742 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 ESCO1Q5FWF5 840 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 RREB1Q92766 1687 aa9.8□□□□□ -0.84
CTDSPL-208ENST00000486978 ABCA3Q99758 1704 aa9.79□□□□□ -0.84
CTDSPL-208ENST00000486978 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
CTDSPL-208ENST00000486978 C1QTNF8P60827 252 aa9.79□□□□□ -0.84
CTDSPL-208ENST00000486978 DISP2A7MBM2 1401 aa9.79□□□□□ -0.84
CTDSPL-208ENST00000486978 NPHP3Q7Z494 1330 aa9.79□□□□□ -0.84
CTDSPL-208ENST00000486978 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL-208ENST00000486978 CCDC9Q9Y3X0 531 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-208ENST00000486978 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-208ENST00000486978 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
CTDSPL-208ENST00000486978 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.84
CTDSPL-208ENST00000486978 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
CTDSPL-208ENST00000486978 ITGAEP38570 1179 aa9.77□□□□□ -0.85
CTDSPL-208ENST00000486978 CHD4Q14839 1912 aa9.76□□□□□ -0.85
CTDSPL-208ENST00000486978 THSD7AQ9UPZ6 1657 aa9.75□□□□□ -0.85
CTDSPL-208ENST00000486978 A0A0G2JS52 829 aa9.75□□□□□ -0.85
CTDSPL-208ENST00000486978 TRIM37O94972 964 aa9.75□□□□□ -0.85
CTDSPL-208ENST00000486978 MYT1Q01538 1121 aa9.75□□□□□ -0.85
CTDSPL-208ENST00000486978 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
CTDSPL-208ENST00000486978 PDGFDQ9GZP0 370 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-208ENST00000486978 CDC42BPGQ6DT37 1551 aa9.73□□□□□ -0.85
CTDSPL-208ENST00000486978 KCNQ2O43526 872 aa9.73□□□□□ -0.85
CTDSPL-208ENST00000486978 KRT28Q7Z3Y7 464 aa9.73□□□□□ -0.85
CTDSPL-208ENST00000486978 CLTCL1P53675 1640 aa9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 MYOM1P52179 1685 aa9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 APBA3O96018 575 aa9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 NINLQ9Y2I6 1382 aa9.72□□□□□ -0.85
CTDSPL-208ENST00000486978 NRKQ7Z2Y5 1582 aa9.71□□□□□ -0.85
CTDSPL-208ENST00000486978 FMN2Q9NZ56 1722 aa9.71□□□□□ -0.85
CTDSPL-208ENST00000486978 CASZ1Q86V15 1759 aa9.71□□□□□ -0.85
CTDSPL-208ENST00000486978 WAPLQ7Z5K2 1190 aa9.71□□□□□ -0.86
CTDSPL-208ENST00000486978 BTG4Q9NY30 223 aa9.71□□□□□ -0.86
CTDSPL-208ENST00000486978 NUP155O75694 1391 aa9.71□□□□□ -0.86
CTDSPL-208ENST00000486978 NAIPQ13075 1403 aa9.71□□□□□ -0.86
CTDSPL-208ENST00000486978 PRAG1Q86YV5 1406 aa9.71□□□□□ -0.86
CTDSPL-208ENST00000486978 PLEKHH1Q9ULM0 1364 aa9.7□□□□□ -0.86
CTDSPL-208ENST00000486978 HFM1A2PYH4 1435 aa9.7□□□□□ -0.86
CTDSPL-208ENST00000486978 SPATA31A5Q5VU36 1347 aa9.69□□□□□ -0.86
CTDSPL-208ENST00000486978 SPATA31A7Q8IWB4 1347 aa9.69□□□□□ -0.86
CTDSPL-208ENST00000486978 ADGRB2O60241 1585 aa9.68□□□□□ -0.86
CTDSPL-208ENST00000486978 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
CTDSPL-208ENST00000486978 LRPPRCP42704 1394 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-208ENST00000486978 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms