RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ANKRD36BQ8N2N9 1353 aa15.73■□□□□ 0.11
PRKCB-207ENST00000486868 METP08581 1390 aa15.72■□□□□ 0.11
PRKCB-207ENST00000486868 LTKP29376 864 aa15.71■□□□□ 0.11
PRKCB-207ENST00000486868 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
PRKCB-207ENST00000486868 CARD14Q9BXL6 1004 aa15.71■□□□□ 0.11
PRKCB-207ENST00000486868 NSD2O96028 1365 aa15.71■□□□□ 0.11
PRKCB-207ENST00000486868 ZBED9Q6R2W3 1325 aa15.7■□□□□ 0.1
PRKCB-207ENST00000486868 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRKCB-207ENST00000486868 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
PRKCB-207ENST00000486868 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
PRKCB-207ENST00000486868 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
PRKCB-207ENST00000486868 CPS1P31327 1500 aa15.69■□□□□ 0.1
PRKCB-207ENST00000486868 SLC12A5Q9H2X9 1139 aa15.69■□□□□ 0.1
PRKCB-207ENST00000486868 PIK3R4Q99570 1358 aa15.69■□□□□ 0.1
PRKCB-207ENST00000486868 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
PRKCB-207ENST00000486868 USP32Q8NFA0 1604 aa15.68■□□□□ 0.1
PRKCB-207ENST00000486868 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
PRKCB-207ENST00000486868 TERF2IPQ9NYB0 399 aa15.67■□□□□ 0.1
PRKCB-207ENST00000486868 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
PRKCB-207ENST00000486868 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
PRKCB-207ENST00000486868 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
PRKCB-207ENST00000486868 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
PRKCB-207ENST00000486868 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
PRKCB-207ENST00000486868 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
PRKCB-207ENST00000486868 NSD3Q9BZ95 1437 aa15.66■□□□□ 0.1
PRKCB-207ENST00000486868 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
PRKCB-207ENST00000486868 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
PRKCB-207ENST00000486868 PTCH1Q13635 1447 aa15.64■□□□□ 0.09
PRKCB-207ENST00000486868 BCANQ96GW7 911 aa15.64■□□□□ 0.09
PRKCB-207ENST00000486868 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
PRKCB-207ENST00000486868 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
PRKCB-207ENST00000486868 SAFB2Q14151 953 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRKCB-207ENST00000486868 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
PRKCB-207ENST00000486868 PLEKHH1Q9ULM0 1364 aa15.62■□□□□ 0.09
PRKCB-207ENST00000486868 HDGFL2Q7Z4V5 671 aaPredicted RBP15.62■□□□□ 0.09
PRKCB-207ENST00000486868 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
PRKCB-207ENST00000486868 ATP7BP35670 1465 aa15.62■□□□□ 0.09
PRKCB-207ENST00000486868 ZNF142P52746 1687 aaPredicted RBP15.62■□□□□ 0.09
PRKCB-207ENST00000486868 CNGB1Q14028 1251 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-207ENST00000486868 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-207ENST00000486868 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
PRKCB-207ENST00000486868 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
PRKCB-207ENST00000486868 ROBO2Q9HCK4 1378 aa15.6■□□□□ 0.09
PRKCB-207ENST00000486868 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
PRKCB-207ENST00000486868 PTPRUQ92729 1446 aa15.59■□□□□ 0.09
PRKCB-207ENST00000486868 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
PRKCB-207ENST00000486868 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
PRKCB-207ENST00000486868 AMOTL2Q9Y2J4 779 aa15.58■□□□□ 0.08
PRKCB-207ENST00000486868 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
PRKCB-207ENST00000486868 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
PRKCB-207ENST00000486868 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
PRKCB-207ENST00000486868 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
PRKCB-207ENST00000486868 SLC26A8Q96RN1 970 aa15.56■□□□□ 0.08
PRKCB-207ENST00000486868 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
PRKCB-207ENST00000486868 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
PRKCB-207ENST00000486868 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
PRKCB-207ENST00000486868 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
PRKCB-207ENST00000486868 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
PRKCB-207ENST00000486868 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRKCB-207ENST00000486868 EDC4Q6P2E9 1401 aaKnown RBP15.53■□□□□ 0.08
PRKCB-207ENST00000486868 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
PRKCB-207ENST00000486868 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
PRKCB-207ENST00000486868 XRN1Q8IZH2 1706 aaKnown RBP15.52■□□□□ 0.08
PRKCB-207ENST00000486868 FYB1O15117 783 aa15.52■□□□□ 0.08
PRKCB-207ENST00000486868 CDC42BPGQ6DT37 1551 aa15.52■□□□□ 0.07
PRKCB-207ENST00000486868 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
PRKCB-207ENST00000486868 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
PRKCB-207ENST00000486868 CFAP53Q96M91 514 aa15.51■□□□□ 0.07
PRKCB-207ENST00000486868 ADAMTS8Q9UP79 889 aa15.51■□□□□ 0.07
PRKCB-207ENST00000486868 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
PRKCB-207ENST00000486868 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-207ENST00000486868 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
PRKCB-207ENST00000486868 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
PRKCB-207ENST00000486868 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
PRKCB-207ENST00000486868 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
PRKCB-207ENST00000486868 NEFLP07196 543 aa15.47■□□□□ 0.07
PRKCB-207ENST00000486868 KCNA6P17658 529 aa15.46■□□□□ 0.07
PRKCB-207ENST00000486868 MTHFSP49914 203 aa15.46■□□□□ 0.07
PRKCB-207ENST00000486868 PNPLA6Q8IY17 1366 aa15.46■□□□□ 0.07
PRKCB-207ENST00000486868 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
PRKCB-207ENST00000486868 ANKRD26Q9UPS8 1709 aa15.44■□□□□ 0.06
PRKCB-207ENST00000486868 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
PRKCB-207ENST00000486868 TOPAZ1Q8N9V7 1692 aa15.42■□□□□ 0.06
PRKCB-207ENST00000486868 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
PRKCB-207ENST00000486868 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
PRKCB-207ENST00000486868 TTC21AQ8NDW8 1320 aa15.42■□□□□ 0.06
PRKCB-207ENST00000486868 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
PRKCB-207ENST00000486868 CHD2O14647 1828 aaKnown RBP15.41■□□□□ 0.06
PRKCB-207ENST00000486868 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
PRKCB-207ENST00000486868 ACEP12821 1306 aa15.41■□□□□ 0.06
PRKCB-207ENST00000486868 MON2Q7Z3U7 1717 aa15.4■□□□□ 0.06
PRKCB-207ENST00000486868 USP6P35125 1406 aa15.4■□□□□ 0.06
PRKCB-207ENST00000486868 NWD1Q149M9 1564 aa15.4■□□□□ 0.06
PRKCB-207ENST00000486868 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
PRKCB-207ENST00000486868 RUNDC1Q96C34 613 aa15.39■□□□□ 0.05
PRKCB-207ENST00000486868 COG3Q96JB2 828 aa15.39■□□□□ 0.05
PRKCB-207ENST00000486868 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
PRKCB-207ENST00000486868 ADGRL3Q9HAR2 1447 aa15.39■□□□□ 0.05
PRKCB-207ENST00000486868 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
PRKCB-207ENST00000486868 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms