RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 FAM9BQ8IZU0 186 aa29.35■■■□□ 2.29
TRADD-202ENST00000486556 ADAMTS13Q76LX8 1427 aa29.32■■■□□ 2.28
TRADD-202ENST00000486556 NINLQ9Y2I6 1382 aa29.31■■■□□ 2.28
TRADD-202ENST00000486556 TECPR2O15040 1411 aa29.31■■■□□ 2.28
TRADD-202ENST00000486556 PNISRQ8TF01 805 aaKnown RBP29.31■■■□□ 2.28
TRADD-202ENST00000486556 SLC12A5Q9H2X9 1139 aa29.31■■■□□ 2.28
TRADD-202ENST00000486556 CARD14Q9BXL6 1004 aa29.3■■■□□ 2.28
TRADD-202ENST00000486556 MINK1Q8N4C8 1332 aaPredicted RBP29.3■■■□□ 2.28
TRADD-202ENST00000486556 HNRNPUQ00839 825 aaKnown RBP eCLIP29.29■■■□□ 2.28
TRADD-202ENST00000486556 FAM135BQ49AJ0 1406 aa29.29■■■□□ 2.28
TRADD-202ENST00000486556 ATAD2Q6PL18 1390 aa29.29■■■□□ 2.28
TRADD-202ENST00000486556 MED14O60244 1454 aa29.28■■■□□ 2.28
TRADD-202ENST00000486556 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
TRADD-202ENST00000486556 CABP2Q9NPB3 220 aa29.28■■■□□ 2.28
TRADD-202ENST00000486556 CEP170BQ9Y4F5 1589 aaPredicted RBP29.27■■■□□ 2.28
TRADD-202ENST00000486556 KNDC1Q76NI1 1749 aa29.26■■■□□ 2.28
TRADD-202ENST00000486556 WAPLQ7Z5K2 1190 aa29.26■■■□□ 2.27
TRADD-202ENST00000486556 TBX22Q9Y458 520 aa29.26■■■□□ 2.27
TRADD-202ENST00000486556 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
TRADD-202ENST00000486556 ANKRD36BQ8N2N9 1353 aa29.24■■■□□ 2.27
TRADD-202ENST00000486556 SETD1BQ9UPS6 1966 aaKnown RBP29.23■■■□□ 2.27
TRADD-202ENST00000486556 CPS1P31327 1500 aa29.22■■■□□ 2.27
TRADD-202ENST00000486556 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
TRADD-202ENST00000486556 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
TRADD-202ENST00000486556 PPP2R1AP30153 589 aa29.19■■■□□ 2.26
TRADD-202ENST00000486556 NSD3Q9BZ95 1437 aa29.19■■■□□ 2.26
TRADD-202ENST00000486556 GTF3C3Q9Y5Q9 886 aa29.18■■■□□ 2.26
TRADD-202ENST00000486556 DIP2AQ14689 1571 aa29.18■■■□□ 2.26
TRADD-202ENST00000486556 SLC26A8Q96RN1 970 aa29.17■■■□□ 2.26
TRADD-202ENST00000486556 ZNF142P52746 1687 aaPredicted RBP29.17■■■□□ 2.26
TRADD-202ENST00000486556 TERF2IPQ9NYB0 399 aa29.15■■■□□ 2.26
TRADD-202ENST00000486556 WASLO00401 505 aaPredicted RBP29.15■■■□□ 2.26
TRADD-202ENST00000486556 ANKLE2Q86XL3 938 aa29.15■■■□□ 2.26
TRADD-202ENST00000486556 USP32Q8NFA0 1604 aa29.15■■■□□ 2.26
TRADD-202ENST00000486556 CGNL1Q0VF96 1302 aa29.14■■■□□ 2.26
TRADD-202ENST00000486556 ZBED9Q6R2W3 1325 aa29.14■■■□□ 2.25
TRADD-202ENST00000486556 ROBO2Q9HCK4 1378 aa29.12■■■□□ 2.25
TRADD-202ENST00000486556 INSRP06213 1382 aa29.11■■■□□ 2.25
TRADD-202ENST00000486556 NSD2O96028 1365 aa29.11■■■□□ 2.25
TRADD-202ENST00000486556 PIK3R4Q99570 1358 aa29.11■■■□□ 2.25
TRADD-202ENST00000486556 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
TRADD-202ENST00000486556 AMOTL2Q9Y2J4 779 aa29.09■■■□□ 2.25
TRADD-202ENST00000486556 A0A1W2PP64 1363 aa29.09■■■□□ 2.25
TRADD-202ENST00000486556 HDGFL2Q7Z4V5 671 aaPredicted RBP29.08■■■□□ 2.25
TRADD-202ENST00000486556 CABP1Q9NZU7 370 aa29.07■■■□□ 2.24
TRADD-202ENST00000486556 MORC1Q86VD1 984 aa29.06■■■□□ 2.24
TRADD-202ENST00000486556 PTCH1Q13635 1447 aa29.05■■■□□ 2.24
TRADD-202ENST00000486556 CD163L1Q9NR16 1453 aa29.05■■■□□ 2.24
TRADD-202ENST00000486556 ATP7BP35670 1465 aa29.03■■■□□ 2.24
TRADD-202ENST00000486556 ADGRB2O60241 1585 aa29.02■■■□□ 2.24
TRADD-202ENST00000486556 NUDT16Q96DE0 195 aaKnown RBP29.01■■■□□ 2.24
TRADD-202ENST00000486556 CCDC61Q9Y6R9 512 aa29.01■■■□□ 2.24
TRADD-202ENST00000486556 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.97■■■□□ 2.23
TRADD-202ENST00000486556 PPIP5K1Q6PFW1 1433 aa28.96■■■□□ 2.23
TRADD-202ENST00000486556 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
TRADD-202ENST00000486556 XRN1Q8IZH2 1706 aaKnown RBP28.95■■■□□ 2.23
TRADD-202ENST00000486556 POLR3AO14802 1390 aaPredicted RBP28.95■■■□□ 2.23
TRADD-202ENST00000486556 CPSF1Q10570 1443 aaKnown RBP28.94■■■□□ 2.22
TRADD-202ENST00000486556 FYB1O15117 783 aa28.94■■■□□ 2.22
TRADD-202ENST00000486556 ZNF692Q9BU19 519 aaPredicted RBP28.93■■■□□ 2.22
TRADD-202ENST00000486556 ADAMTS8Q9UP79 889 aa28.92■■■□□ 2.22
TRADD-202ENST00000486556 BLMP54132 1417 aaPredicted RBP28.92■■■□□ 2.22
TRADD-202ENST00000486556 KCNA6P17658 529 aa28.91■■■□□ 2.22
TRADD-202ENST00000486556 NPHP4O75161 1426 aaPredicted RBP28.9■■■□□ 2.22
TRADD-202ENST00000486556 PRR36Q9H6K5 1346 aa28.89■■■□□ 2.21
TRADD-202ENST00000486556 EDC4Q6P2E9 1401 aaKnown RBP28.88■■■□□ 2.21
TRADD-202ENST00000486556 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
TRADD-202ENST00000486556 TNNT2P45379 298 aaPredicted RBP28.87■■■□□ 2.21
TRADD-202ENST00000486556 GGNBP2Q9H3C7 697 aa28.87■■■□□ 2.21
TRADD-202ENST00000486556 CDC42BPGQ6DT37 1551 aa28.87■■■□□ 2.21
TRADD-202ENST00000486556 CHD2O14647 1828 aaKnown RBP28.86■■■□□ 2.21
TRADD-202ENST00000486556 MTHFSP49914 203 aa28.85■■■□□ 2.21
TRADD-202ENST00000486556 CFAP53Q96M91 514 aa28.85■■■□□ 2.21
TRADD-202ENST00000486556 ANKRD26Q9UPS8 1709 aa28.84■■■□□ 2.21
TRADD-202ENST00000486556 NCKAP5LQ9HCH0 1330 aa28.82■■■□□ 2.2
TRADD-202ENST00000486556 PDE3BQ13370 1112 aa28.81■■■□□ 2.2
TRADD-202ENST00000486556 SMG6Q86US8 1419 aaKnown RBP28.8■■■□□ 2.2
TRADD-202ENST00000486556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.8■■■□□ 2.2
TRADD-202ENST00000486556 KIF20BQ96Q89 1820 aa28.8■■■□□ 2.2
TRADD-202ENST00000486556 TOPAZ1Q8N9V7 1692 aa28.79■■■□□ 2.2
TRADD-202ENST00000486556 AKAP12Q02952 1782 aa28.78■■■□□ 2.2
TRADD-202ENST00000486556 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
TRADD-202ENST00000486556 NUDCQ9Y266 331 aa28.76■■■□□ 2.19
TRADD-202ENST00000486556 ITSN1Q15811 1721 aa28.76■■■□□ 2.19
TRADD-202ENST00000486556 ANKARQ7Z5J8 1434 aa28.76■■■□□ 2.19
TRADD-202ENST00000486556 ACEP12821 1306 aa28.76■■■□□ 2.19
TRADD-202ENST00000486556 NUTM2FA1L443 756 aa28.73■■■□□ 2.19
TRADD-202ENST00000486556 NGEFQ8N5V2 710 aa28.73■■■□□ 2.19
TRADD-202ENST00000486556 NEFLP07196 543 aa28.73■■■□□ 2.19
TRADD-202ENST00000486556 SUPT16HQ9Y5B9 1047 aaKnown RBP28.71■■■□□ 2.19
TRADD-202ENST00000486556 SENP3-EIF4A1A0A087X0R7 540 aa28.71■■■□□ 2.19
TRADD-202ENST00000486556 KDM4FA0A1W2PPD8 638 aa28.69■■■□□ 2.18
TRADD-202ENST00000486556 NME9Q86XW9 330 aa28.69■■■□□ 2.18
TRADD-202ENST00000486556 COG3Q96JB2 828 aa28.69■■■□□ 2.18
TRADD-202ENST00000486556 SALL2Q9Y467 1007 aaPredicted RBP28.69■■■□□ 2.18
TRADD-202ENST00000486556 TTC21BQ7Z4L5 1316 aa28.69■■■□□ 2.18
TRADD-202ENST00000486556 USP6P35125 1406 aa28.69■■■□□ 2.18
TRADD-202ENST00000486556 SHPRHQ149N8 1683 aa28.68■■■□□ 2.18
TRADD-202ENST00000486556 NKTRP30414 1462 aaKnown RBP28.68■■■□□ 2.18
TRADD-202ENST00000486556 PNPLA6Q8IY17 1366 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms