RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
NELFCD-209ENST00000486263 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
NELFCD-209ENST00000486263 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
NELFCD-209ENST00000486263 TECPR2O15040 1411 aa19.42■□□□□ 0.7
NELFCD-209ENST00000486263 FAM135BQ49AJ0 1406 aa19.41■□□□□ 0.7
NELFCD-209ENST00000486263 KNDC1Q76NI1 1749 aa19.4■□□□□ 0.7
NELFCD-209ENST00000486263 ROBO2Q9HCK4 1378 aa19.4■□□□□ 0.7
NELFCD-209ENST00000486263 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
NELFCD-209ENST00000486263 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
NELFCD-209ENST00000486263 ARHGEF28Q8N1W1 1705 aaKnown RBP19.39■□□□□ 0.69
NELFCD-209ENST00000486263 TMF1P82094 1093 aa19.38■□□□□ 0.69
NELFCD-209ENST00000486263 RBM33Q96EV2 1170 aaKnown RBP19.38■□□□□ 0.69
NELFCD-209ENST00000486263 C19orf44Q9H6X5 657 aa19.38■□□□□ 0.69
NELFCD-209ENST00000486263 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
NELFCD-209ENST00000486263 C14orf37Q86TY3 774 aa19.37■□□□□ 0.69
NELFCD-209ENST00000486263 PLEKHH1Q9ULM0 1364 aa19.36■□□□□ 0.69
NELFCD-209ENST00000486263 HSPA1LP34931 641 aa19.36■□□□□ 0.69
NELFCD-209ENST00000486263 QRICH2Q9H0J4 1663 aa19.34■□□□□ 0.69
NELFCD-209ENST00000486263 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
NELFCD-209ENST00000486263 TESK2Q96S53 571 aa19.34■□□□□ 0.69
NELFCD-209ENST00000486263 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
NELFCD-209ENST00000486263 DCCP43146 1447 aa19.34■□□□□ 0.69
NELFCD-209ENST00000486263 EVC2Q86UK5 1308 aa19.33■□□□□ 0.69
NELFCD-209ENST00000486263 CDCA8Q53HL2 280 aa19.33■□□□□ 0.68
NELFCD-209ENST00000486263 SLAIN2Q9P270 581 aa19.33■□□□□ 0.68
NELFCD-209ENST00000486263 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
NELFCD-209ENST00000486263 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.32■□□□□ 0.68
NELFCD-209ENST00000486263 ATF3P18847 181 aa19.31■□□□□ 0.68
NELFCD-209ENST00000486263 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
NELFCD-209ENST00000486263 ADGRL3Q9HAR2 1447 aa19.28■□□□□ 0.68
NELFCD-209ENST00000486263 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
NELFCD-209ENST00000486263 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
NELFCD-209ENST00000486263 WASLO00401 505 aaPredicted RBP19.27■□□□□ 0.68
NELFCD-209ENST00000486263 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
NELFCD-209ENST00000486263 C11orf95C9JLR9 678 aaPredicted RBP19.26■□□□□ 0.67
NELFCD-209ENST00000486263 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
NELFCD-209ENST00000486263 CABP2Q9NPB3 220 aa19.24■□□□□ 0.67
NELFCD-209ENST00000486263 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
NELFCD-209ENST00000486263 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
NELFCD-209ENST00000486263 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
NELFCD-209ENST00000486263 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
NELFCD-209ENST00000486263 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
NELFCD-209ENST00000486263 NUTM2FA1L443 756 aa19.21■□□□□ 0.67
NELFCD-209ENST00000486263 ADGRB2O60241 1585 aa19.21■□□□□ 0.67
NELFCD-209ENST00000486263 MST1RQ04912 1400 aa19.2■□□□□ 0.66
NELFCD-209ENST00000486263 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
NELFCD-209ENST00000486263 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
NELFCD-209ENST00000486263 NUDT16Q96DE0 195 aaKnown RBP19.18■□□□□ 0.66
NELFCD-209ENST00000486263 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
NELFCD-209ENST00000486263 CDC42BPGQ6DT37 1551 aa19.17■□□□□ 0.66
NELFCD-209ENST00000486263 AHDC1Q5TGY3 1603 aaPredicted RBP19.17■□□□□ 0.66
NELFCD-209ENST00000486263 PHLPP1O60346 1717 aa19.17■□□□□ 0.66
NELFCD-209ENST00000486263 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
NELFCD-209ENST00000486263 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
NELFCD-209ENST00000486263 ANKARQ7Z5J8 1434 aa19.14■□□□□ 0.65
NELFCD-209ENST00000486263 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
NELFCD-209ENST00000486263 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
NELFCD-209ENST00000486263 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
NELFCD-209ENST00000486263 MED1Q15648 1581 aaPredicted RBP19.13■□□□□ 0.65
NELFCD-209ENST00000486263 COL16A1Q07092 1604 aaPredicted RBP19.13■□□□□ 0.65
NELFCD-209ENST00000486263 FMN2Q9NZ56 1722 aa19.12■□□□□ 0.65
NELFCD-209ENST00000486263 JCADQ9P266 1359 aa19.12■□□□□ 0.65
NELFCD-209ENST00000486263 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
NELFCD-209ENST00000486263 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
NELFCD-209ENST00000486263 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
NELFCD-209ENST00000486263 ESCO1Q5FWF5 840 aa19.11■□□□□ 0.65
NELFCD-209ENST00000486263 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
NELFCD-209ENST00000486263 TERF2IPQ9NYB0 399 aa19.11■□□□□ 0.65
NELFCD-209ENST00000486263 ATP7BP35670 1465 aa19.1■□□□□ 0.65
NELFCD-209ENST00000486263 NHSL1Q5SYE7 1610 aa19.1■□□□□ 0.65
NELFCD-209ENST00000486263 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
NELFCD-209ENST00000486263 PANK3Q9H999 370 aa19.09■□□□□ 0.65
NELFCD-209ENST00000486263 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.64
NELFCD-209ENST00000486263 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
NELFCD-209ENST00000486263 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
NELFCD-209ENST00000486263 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
NELFCD-209ENST00000486263 USP32Q8NFA0 1604 aa19.05■□□□□ 0.64
NELFCD-209ENST00000486263 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
NELFCD-209ENST00000486263 ORAI2Q96SN7 254 aa19.05■□□□□ 0.64
NELFCD-209ENST00000486263 ZNF692Q9BU19 519 aaPredicted RBP19.05■□□□□ 0.64
NELFCD-209ENST00000486263 ANKRD36BQ8N2N9 1353 aa19.05■□□□□ 0.64
NELFCD-209ENST00000486263 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
NELFCD-209ENST00000486263 ACEP12821 1306 aa19.04■□□□□ 0.64
NELFCD-209ENST00000486263 SPATA31A6Q5VVP1 1343 aa19.04■□□□□ 0.64
NELFCD-209ENST00000486263 KNSTRNQ9Y448 316 aa19.04■□□□□ 0.64
NELFCD-209ENST00000486263 MYOM1P52179 1685 aa19.03■□□□□ 0.64
NELFCD-209ENST00000486263 RGPD8O14715 1765 aaPredicted RBP19.03■□□□□ 0.64
NELFCD-209ENST00000486263 SOS2Q07890 1332 aaPredicted RBP19.02■□□□□ 0.64
NELFCD-209ENST00000486263 PSME1Q06323 249 aa19.02■□□□□ 0.64
NELFCD-209ENST00000486263 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
NELFCD-209ENST00000486263 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
NELFCD-209ENST00000486263 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
NELFCD-209ENST00000486263 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
NELFCD-209ENST00000486263 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
NELFCD-209ENST00000486263 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
NELFCD-209ENST00000486263 FOXO3O43524 673 aa18.99■□□□□ 0.63
NELFCD-209ENST00000486263 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
NELFCD-209ENST00000486263 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
NELFCD-209ENST00000486263 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
NELFCD-209ENST00000486263 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms