RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 STK26Q9P289 416 aa30.64■■■□□ 2.5
NECAB3-211ENST00000485399 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.64■■■□□ 2.49
NECAB3-211ENST00000485399 ABCC11Q96J66 1382 aa30.64■■■□□ 2.49
NECAB3-211ENST00000485399 COL16A1Q07092 1604 aaPredicted RBP30.62■■■□□ 2.49
NECAB3-211ENST00000485399 PTPRUQ92729 1446 aa30.61■■■□□ 2.49
NECAB3-211ENST00000485399 KNDC1Q76NI1 1749 aa30.61■■■□□ 2.49
NECAB3-211ENST00000485399 DLC1Q96QB1 1528 aa30.6■■■□□ 2.49
NECAB3-211ENST00000485399 ARHGEF28Q8N1W1 1705 aaKnown RBP30.6■■■□□ 2.49
NECAB3-211ENST00000485399 ST20-MTHFSA0A0A6YYL1 179 aa30.59■■■□□ 2.49
NECAB3-211ENST00000485399 TECPR2O15040 1411 aa30.58■■■□□ 2.49
NECAB3-211ENST00000485399 AMOTL2Q9Y2J4 779 aa30.57■■■□□ 2.48
NECAB3-211ENST00000485399 POTEAQ6S8J7 498 aa30.56■■■□□ 2.48
NECAB3-211ENST00000485399 SIRT1Q96EB6 747 aa30.56■■■□□ 2.48
NECAB3-211ENST00000485399 XRN1Q8IZH2 1706 aaKnown RBP30.56■■■□□ 2.48
NECAB3-211ENST00000485399 JCADQ9P266 1359 aa30.56■■■□□ 2.48
NECAB3-211ENST00000485399 HIRIP3Q9BW71 556 aaPredicted RBP30.55■■■□□ 2.48
NECAB3-211ENST00000485399 CENPJQ9HC77 1338 aaPredicted RBP30.54■■■□□ 2.48
NECAB3-211ENST00000485399 C19orf44Q9H6X5 657 aa30.54■■■□□ 2.48
NECAB3-211ENST00000485399 AHDC1Q5TGY3 1603 aaPredicted RBP30.53■■■□□ 2.48
NECAB3-211ENST00000485399 ZNF316A6NFI3 1004 aaPredicted RBP30.53■■■□□ 2.48
NECAB3-211ENST00000485399 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
NECAB3-211ENST00000485399 CADPS2Q86UW7 1296 aa30.52■■■□□ 2.48
NECAB3-211ENST00000485399 POGKQ9P215 609 aa30.52■■■□□ 2.48
NECAB3-211ENST00000485399 SLC24A1O60721 1099 aa30.51■■■□□ 2.47
NECAB3-211ENST00000485399 PRAM1Q96QH2 718 aa30.5■■■□□ 2.47
NECAB3-211ENST00000485399 QRICH2Q9H0J4 1663 aa30.49■■■□□ 2.47
NECAB3-211ENST00000485399 PTCH1Q13635 1447 aa30.49■■■□□ 2.47
NECAB3-211ENST00000485399 ATF3P18847 181 aa30.47■■■□□ 2.47
NECAB3-211ENST00000485399 TESK2Q96S53 571 aa30.47■■■□□ 2.47
NECAB3-211ENST00000485399 ROBO2Q9HCK4 1378 aa30.46■■■□□ 2.47
NECAB3-211ENST00000485399 SBNO2Q9Y2G9 1366 aa30.46■■■□□ 2.47
NECAB3-211ENST00000485399 DCCP43146 1447 aa30.46■■■□□ 2.47
NECAB3-211ENST00000485399 LRP6O75581 1613 aa30.46■■■□□ 2.47
NECAB3-211ENST00000485399 SHPRHQ149N8 1683 aa30.45■■■□□ 2.47
NECAB3-211ENST00000485399 WAPLQ7Z5K2 1190 aa30.44■■■□□ 2.46
NECAB3-211ENST00000485399 SAFB2Q14151 953 aaKnown RBP eCLIP30.41■■■□□ 2.46
NECAB3-211ENST00000485399 PLEKHH1Q9ULM0 1364 aa30.41■■■□□ 2.46
NECAB3-211ENST00000485399 TMF1P82094 1093 aa30.41■■■□□ 2.46
NECAB3-211ENST00000485399 BRINP3Q76B58 766 aa30.41■■■□□ 2.46
NECAB3-211ENST00000485399 SPATA31A6Q5VVP1 1343 aa30.4■■■□□ 2.46
NECAB3-211ENST00000485399 MST1RQ04912 1400 aa30.37■■■□□ 2.45
NECAB3-211ENST00000485399 MINK1Q8N4C8 1332 aaPredicted RBP30.36■■■□□ 2.45
NECAB3-211ENST00000485399 NALCNQ8IZF0 1738 aa30.36■■■□□ 2.45
NECAB3-211ENST00000485399 NHSL1Q5SYE7 1610 aa30.35■■■□□ 2.45
NECAB3-211ENST00000485399 CDCA8Q53HL2 280 aa30.34■■■□□ 2.45
NECAB3-211ENST00000485399 EVC2Q86UK5 1308 aa30.34■■■□□ 2.45
NECAB3-211ENST00000485399 ADGRL3Q9HAR2 1447 aa30.33■■■□□ 2.45
NECAB3-211ENST00000485399 C11orf95C9JLR9 678 aaPredicted RBP30.33■■■□□ 2.45
NECAB3-211ENST00000485399 KIF7Q2M1P5 1343 aa30.29■■■□□ 2.44
NECAB3-211ENST00000485399 CCDC7Q96M83 1385 aa30.29■■■□□ 2.44
NECAB3-211ENST00000485399 ADGRB2O60241 1585 aa30.29■■■□□ 2.44
NECAB3-211ENST00000485399 WASHC2AQ641Q2 1341 aa30.28■■■□□ 2.44
NECAB3-211ENST00000485399 TULP4Q9NRJ4 1543 aa30.28■■■□□ 2.44
NECAB3-211ENST00000485399 PUS7Q96PZ0 661 aaKnown RBP30.27■■■□□ 2.44
NECAB3-211ENST00000485399 WASLO00401 505 aaPredicted RBP30.25■■■□□ 2.43
NECAB3-211ENST00000485399 MEX3CQ5U5Q3 659 aaKnown RBP30.24■■■□□ 2.43
NECAB3-211ENST00000485399 POLR3GLQ9BT43 218 aa30.24■■■□□ 2.43
NECAB3-211ENST00000485399 CDK19Q9BWU1 502 aa30.24■■■□□ 2.43
NECAB3-211ENST00000485399 SRPK2P78362 688 aaKnown RBP30.21■■■□□ 2.43
NECAB3-211ENST00000485399 ZNF772Q68DY9 489 aaPredicted RBP30.21■■■□□ 2.43
NECAB3-211ENST00000485399 DDX17Q92841 729 aaKnown RBP30.18■■■□□ 2.42
NECAB3-211ENST00000485399 CABP2Q9NPB3 220 aa30.18■■■□□ 2.42
NECAB3-211ENST00000485399 C1orf167Q5SNV9 1468 aa30.18■■■□□ 2.42
NECAB3-211ENST00000485399 CDC42BPGQ6DT37 1551 aa30.18■■■□□ 2.42
NECAB3-211ENST00000485399 NUTM2BA6NNL0 878 aaPredicted RBP30.16■■■□□ 2.42
NECAB3-211ENST00000485399 NUTM2EB1AL46 878 aaPredicted RBP30.16■■■□□ 2.42
NECAB3-211ENST00000485399 NUTM2AQ8IVF1 878 aaPredicted RBP30.16■■■□□ 2.42
NECAB3-211ENST00000485399 ATAD2Q6PL18 1390 aa30.16■■■□□ 2.42
NECAB3-211ENST00000485399 LRRC59Q96AG4 307 aaKnown RBP30.15■■■□□ 2.42
NECAB3-211ENST00000485399 PNPLA6Q8IY17 1366 aa30.15■■■□□ 2.42
NECAB3-211ENST00000485399 FMN2Q9NZ56 1722 aa30.12■■■□□ 2.41
NECAB3-211ENST00000485399 DDX10Q13206 875 aaKnown RBP30.11■■■□□ 2.41
NECAB3-211ENST00000485399 NUDT16Q96DE0 195 aaKnown RBP30.1■■■□□ 2.41
NECAB3-211ENST00000485399 AFF2P51816 1311 aa30.09■■■□□ 2.41
NECAB3-211ENST00000485399 NINLQ9Y2I6 1382 aa30.09■■■□□ 2.41
NECAB3-211ENST00000485399 MYOM1P52179 1685 aa30.08■■■□□ 2.41
NECAB3-211ENST00000485399 ANKARQ7Z5J8 1434 aa30.08■■■□□ 2.41
NECAB3-211ENST00000485399 CDK12Q9NYV4 1490 aaPredicted RBP30.07■■■□□ 2.4
NECAB3-211ENST00000485399 ATP7BP35670 1465 aa30.07■■■□□ 2.4
NECAB3-211ENST00000485399 TMC1Q8TDI8 760 aa30.06■■■□□ 2.4
NECAB3-211ENST00000485399 ORAI2Q96SN7 254 aa30.06■■■□□ 2.4
NECAB3-211ENST00000485399 CCDC61Q9Y6R9 512 aa30.06■■■□□ 2.4
NECAB3-211ENST00000485399 RXRBP28702 533 aa30.05■■■□□ 2.4
NECAB3-211ENST00000485399 SOS2Q07890 1332 aaPredicted RBP30.04■■■□□ 2.4
NECAB3-211ENST00000485399 PRR36Q9H6K5 1346 aa30.04■■■□□ 2.4
NECAB3-211ENST00000485399 USP32Q8NFA0 1604 aa30.04■■■□□ 2.4
NECAB3-211ENST00000485399 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
NECAB3-211ENST00000485399 NUTM2FA1L443 756 aa30.03■■■□□ 2.4
NECAB3-211ENST00000485399 UPF1Q92900 1129 aaKnown RBP eCLIP30.03■■■□□ 2.41e-12■□□□□ 10.7
NECAB3-211ENST00000485399 TOPAZ1Q8N9V7 1692 aa30.02■■■□□ 2.4
NECAB3-211ENST00000485399 SLC12A5Q9H2X9 1139 aa30.02■■■□□ 2.4
NECAB3-211ENST00000485399 RGPD8O14715 1765 aaPredicted RBP30.01■■■□□ 2.4
NECAB3-211ENST00000485399 PPIP5K1Q6PFW1 1433 aa30.01■■■□□ 2.39
NECAB3-211ENST00000485399 C8orf37Q96NL8 207 aa30■■■□□ 2.39
NECAB3-211ENST00000485399 CABP1Q9NZU7 370 aa30■■■□□ 2.39
NECAB3-211ENST00000485399 PANK3Q9H999 370 aa29.99■■■□□ 2.39
NECAB3-211ENST00000485399 TERF2IPQ9NYB0 399 aa29.97■■■□□ 2.39
NECAB3-211ENST00000485399 COL22A1Q8NFW1 1626 aaPredicted RBP29.97■■■□□ 2.39
NECAB3-211ENST00000485399 PLEKHG3A1L390 1219 aa29.96■■■□□ 2.39
NECAB3-211ENST00000485399 ANKRD36BQ8N2N9 1353 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms