RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 GOLGA6L3A6NEY3 463 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 RAD21O60216 631 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 CCDC30Q5VVM6 783 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 ANO2Q9NQ90 1003 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 BRD4O60885 1362 aaPredicted RBP19.46■□□□□ 0.71
PCDH17-202ENST00000484979 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
PCDH17-202ENST00000484979 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
PCDH17-202ENST00000484979 STRN4Q9NRL3 753 aa19.45■□□□□ 0.7
PCDH17-202ENST00000484979 ADAMTS8Q9UP79 889 aa19.45■□□□□ 0.7
PCDH17-202ENST00000484979 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
PCDH17-202ENST00000484979 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
PCDH17-202ENST00000484979 DDX11L8A8MPP1 907 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 FOXD4L5Q5VV16 416 aaPredicted RBP19.44■□□□□ 0.7
PCDH17-202ENST00000484979 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
PCDH17-202ENST00000484979 FOXD4L4Q8WXT5 416 aaPredicted RBP19.44■□□□□ 0.7
PCDH17-202ENST00000484979 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 FBXW7Q969H0 707 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
PCDH17-202ENST00000484979 ERICH2A1L162 156 aa19.43■□□□□ 0.7
PCDH17-202ENST00000484979 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
PCDH17-202ENST00000484979 TPM3P06753 285 aa19.43■□□□□ 0.7
PCDH17-202ENST00000484979 TPD52L1Q16890 204 aaPredicted RBP19.43■□□□□ 0.7
PCDH17-202ENST00000484979 NOC3LQ8WTT2 800 aaKnown RBP19.43■□□□□ 0.7
PCDH17-202ENST00000484979 PRDM11Q9NQV5 511 aa19.43■□□□□ 0.7
PCDH17-202ENST00000484979 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
PCDH17-202ENST00000484979 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
PCDH17-202ENST00000484979 KIAA0586Q9BVV6 1533 aa19.42■□□□□ 0.7
PCDH17-202ENST00000484979 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
PCDH17-202ENST00000484979 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
PCDH17-202ENST00000484979 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
PCDH17-202ENST00000484979 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
PCDH17-202ENST00000484979 TOM1L2Q6ZVM7 507 aa19.41■□□□□ 0.7
PCDH17-202ENST00000484979 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
PCDH17-202ENST00000484979 BECN2A8MW95 431 aa19.41■□□□□ 0.7
PCDH17-202ENST00000484979 PES1O00541 588 aaKnown RBP19.41■□□□□ 0.7
PCDH17-202ENST00000484979 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
PCDH17-202ENST00000484979 TSR1Q2NL82 804 aaKnown RBP19.41■□□□□ 0.7
PCDH17-202ENST00000484979 PNISRQ8TF01 805 aaKnown RBP19.4■□□□□ 0.7
PCDH17-202ENST00000484979 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
PCDH17-202ENST00000484979 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.7
PCDH17-202ENST00000484979 WASHC4Q2M389 1173 aa19.39■□□□□ 0.69
PCDH17-202ENST00000484979 GOLGA6L19H0YKK7 550 aa19.39■□□□□ 0.69
PCDH17-202ENST00000484979 NFXL1Q6ZNB6 911 aa19.39■□□□□ 0.69
PCDH17-202ENST00000484979 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
PCDH17-202ENST00000484979 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
PCDH17-202ENST00000484979 ZNF530Q6P9A1 599 aaPredicted RBP19.38■□□□□ 0.69
PCDH17-202ENST00000484979 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
PCDH17-202ENST00000484979 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
PCDH17-202ENST00000484979 KIF6Q6ZMV9 814 aa19.37■□□□□ 0.69
PCDH17-202ENST00000484979 SURF6O75683 361 aaKnown RBP19.37■□□□□ 0.69
PCDH17-202ENST00000484979 SF3B2Q13435 895 aaKnown RBP19.37■□□□□ 0.69
PCDH17-202ENST00000484979 SKOR2Q2VWA4 1001 aaPredicted RBP19.37■□□□□ 0.69
PCDH17-202ENST00000484979 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
PCDH17-202ENST00000484979 HDGFL1Q5TGJ6 251 aa19.37■□□□□ 0.69
PCDH17-202ENST00000484979 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
PCDH17-202ENST00000484979 TSHZ2Q9NRE2 1034 aa19.37■□□□□ 0.69
PCDH17-202ENST00000484979 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDH17-202ENST00000484979 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
PCDH17-202ENST00000484979 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
PCDH17-202ENST00000484979 TPM1P09493 284 aa19.35■□□□□ 0.69
PCDH17-202ENST00000484979 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
PCDH17-202ENST00000484979 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
PCDH17-202ENST00000484979 TPM2P07951 284 aa19.35■□□□□ 0.69
PCDH17-202ENST00000484979 FOXD4L6Q3SYB3 417 aaPredicted RBP19.34■□□□□ 0.69
PCDH17-202ENST00000484979 FOXD4L3Q6VB84 417 aaPredicted RBP19.34■□□□□ 0.69
PCDH17-202ENST00000484979 PANK1Q8TE04 598 aa19.34■□□□□ 0.69
PCDH17-202ENST00000484979 HMGB2P26583 209 aaKnown RBP19.34■□□□□ 0.69
PCDH17-202ENST00000484979 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
PCDH17-202ENST00000484979 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
PCDH17-202ENST00000484979 CABP4P57796 275 aa19.34■□□□□ 0.69
PCDH17-202ENST00000484979 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.69
PCDH17-202ENST00000484979 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.69
PCDH17-202ENST00000484979 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.69
PCDH17-202ENST00000484979 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.69
PCDH17-202ENST00000484979 EXOSC9Q06265 439 aaKnown RBP19.33■□□□□ 0.69
PCDH17-202ENST00000484979 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
PCDH17-202ENST00000484979 SMC3Q9UQE7 1217 aa19.32■□□□□ 0.68
PCDH17-202ENST00000484979 HOOK1Q9UJC3 728 aaKnown RBP19.32■□□□□ 0.68
PCDH17-202ENST00000484979 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
PCDH17-202ENST00000484979 ANKRD20A12PQ8NF67 263 aa19.31■□□□□ 0.68
PCDH17-202ENST00000484979 CWC22Q9HCG8 908 aaKnown RBP19.31■□□□□ 0.68
PCDH17-202ENST00000484979 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
PCDH17-202ENST00000484979 CCDC43Q96MW1 224 aaKnown RBP19.3■□□□□ 0.68
PCDH17-202ENST00000484979 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
PCDH17-202ENST00000484979 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
PCDH17-202ENST00000484979 ERBINQ96RT1 1412 aa19.3■□□□□ 0.68
PCDH17-202ENST00000484979 ERC1Q8IUD2 1116 aa19.3■□□□□ 0.68
PCDH17-202ENST00000484979 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
PCDH17-202ENST00000484979 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms