RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 C1orf115Q9H7X2 142 aa14.47□□□□□ -0.09
MCF2-207ENST00000483690 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
MCF2-207ENST00000483690 GOLGA8CPA6NN73 597 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 SOCS7O14512 581 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 HRO43593 1189 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 USP17L8P0C7I0 530 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 CDAN1Q8IWY9 1227 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 PLSCR2Q9NRY7 297 aa14.45□□□□□ -0.1
MCF2-207ENST00000483690 C6orf229H3BNL8 230 aa14.44□□□□□ -0.1
MCF2-207ENST00000483690 ANKRD13DQ6ZTN6 518 aa14.44□□□□□ -0.1
MCF2-207ENST00000483690 ANKK1Q8NFD2 765 aa14.44□□□□□ -0.1
MCF2-207ENST00000483690 PRM3Q9NNZ6 103 aa14.44□□□□□ -0.1
MCF2-207ENST00000483690 ARID3AQ99856 593 aa14.43□□□□□ -0.1
MCF2-207ENST00000483690 FNBP4Q8N3X1 1017 aaPredicted RBP14.42□□□□□ -0.1
MCF2-207ENST00000483690 PRR14Q9BWN1 585 aa14.42□□□□□ -0.1
MCF2-207ENST00000483690 HELBQ8NG08 1087 aaPredicted RBP14.41□□□□□ -0.1
MCF2-207ENST00000483690 ACTN4O43707 911 aaKnown RBP14.4□□□□□ -0.1
MCF2-207ENST00000483690 TSC1Q92574 1164 aa14.4□□□□□ -0.1
MCF2-207ENST00000483690 GDPD2Q9HCC8 539 aa14.4□□□□□ -0.1
MCF2-207ENST00000483690 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
MCF2-207ENST00000483690 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
MCF2-207ENST00000483690 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
MCF2-207ENST00000483690 PPP4CP60510 307 aa14.37□□□□□ -0.11
MCF2-207ENST00000483690 MORN1Q5T089 497 aa14.37□□□□□ -0.11
MCF2-207ENST00000483690 CFAP99D6REC4 459 aa14.36□□□□□ -0.11
MCF2-207ENST00000483690 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
MCF2-207ENST00000483690 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
MCF2-207ENST00000483690 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
MCF2-207ENST00000483690 Q3C1V9 767 aa14.35□□□□□ -0.11
MCF2-207ENST00000483690 ABL2P42684 1182 aa14.34□□□□□ -0.11
MCF2-207ENST00000483690 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
MCF2-207ENST00000483690 WNT2BQ93097 391 aa14.34□□□□□ -0.11
MCF2-207ENST00000483690 TBC1D2BQ9UPU7 963 aa14.34□□□□□ -0.11
MCF2-207ENST00000483690 ZNF330Q9Y3S2 320 aaPredicted RBP14.34□□□□□ -0.11
MCF2-207ENST00000483690 BCAMP50895 628 aa14.33□□□□□ -0.12
MCF2-207ENST00000483690 TSR3Q9UJK0 312 aaKnown RBP14.33□□□□□ -0.12
MCF2-207ENST00000483690 SLC27A5Q9Y2P5 690 aa14.33□□□□□ -0.12
MCF2-207ENST00000483690 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
MCF2-207ENST00000483690 RETREG3Q86VR2 466 aa14.32□□□□□ -0.12
MCF2-207ENST00000483690 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
MCF2-207ENST00000483690 PRR7Q8TB68 274 aa14.32□□□□□ -0.12
MCF2-207ENST00000483690 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
MCF2-207ENST00000483690 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
MCF2-207ENST00000483690 APLP1P51693 650 aa14.29□□□□□ -0.12
MCF2-207ENST00000483690 LRRN4Q8WUT4 740 aa14.29□□□□□ -0.12
MCF2-207ENST00000483690 CCDC97Q96F63 343 aaPredicted RBP14.26□□□□□ -0.13
MCF2-207ENST00000483690 PCDHB3Q9Y5E6 796 aa14.26□□□□□ -0.13
MCF2-207ENST00000483690 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
MCF2-207ENST00000483690 NR1I2O75469 434 aa14.24□□□□□ -0.13
MCF2-207ENST00000483690 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
MCF2-207ENST00000483690 SERPINA10Q9UK55 444 aa14.24□□□□□ -0.13
MCF2-207ENST00000483690 BLOC1S3Q6QNY0 202 aa14.23□□□□□ -0.13
MCF2-207ENST00000483690 RNF19BQ6ZMZ0 732 aa14.23□□□□□ -0.13
MCF2-207ENST00000483690 USB1Q9BQ65 265 aaKnown RBP14.23□□□□□ -0.13
MCF2-207ENST00000483690 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
MCF2-207ENST00000483690 SCUBE3Q8IX30 993 aa14.22□□□□□ -0.13
MCF2-207ENST00000483690 FMNL1O95466 1100 aaPredicted RBP14.21□□□□□ -0.13
MCF2-207ENST00000483690 BRICD5Q6PL45 260 aa14.21□□□□□ -0.13
MCF2-207ENST00000483690 KRTAP3-3Q9BYR6 98 aa14.21□□□□□ -0.13
MCF2-207ENST00000483690 KRTAP3-2Q9BYR7 98 aa14.21□□□□□ -0.13
MCF2-207ENST00000483690 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
MCF2-207ENST00000483690 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
MCF2-207ENST00000483690 IRF5Q13568 498 aa14.18□□□□□ -0.14
MCF2-207ENST00000483690 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
MCF2-207ENST00000483690 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
MCF2-207ENST00000483690 POM121CA8CG34 1229 aa14.17□□□□□ -0.14
MCF2-207ENST00000483690 NR6A1Q15406 480 aa14.17□□□□□ -0.14
MCF2-207ENST00000483690 LYPD8Q6UX82 237 aa14.17□□□□□ -0.14
MCF2-207ENST00000483690 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
MCF2-207ENST00000483690 CALR3Q96L12 384 aaKnown RBP14.17□□□□□ -0.14
MCF2-207ENST00000483690 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
MCF2-207ENST00000483690 GPR37L1O60883 481 aa14.15□□□□□ -0.14
MCF2-207ENST00000483690 GLMNQ92990 594 aa14.15□□□□□ -0.14
MCF2-207ENST00000483690 KCTD12Q96CX2 325 aaKnown RBP14.15□□□□□ -0.14
MCF2-207ENST00000483690 PNMA1Q8ND90 353 aa14.14□□□□□ -0.15
MCF2-207ENST00000483690 JUNDP17535 347 aa14.11□□□□□ -0.15
MCF2-207ENST00000483690 COPS2P61201 443 aa14.11□□□□□ -0.15
MCF2-207ENST00000483690 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
MCF2-207ENST00000483690 VAC14Q08AM6 782 aa14.1□□□□□ -0.15
MCF2-207ENST00000483690 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
MCF2-207ENST00000483690 PTPRNQ16849 979 aa14.09□□□□□ -0.15
MCF2-207ENST00000483690 SPSB2Q99619 263 aa14.09□□□□□ -0.15
MCF2-207ENST00000483690 MSS51Q4VC12 460 aa14.08□□□□□ -0.16
MCF2-207ENST00000483690 HDGFL1Q5TGJ6 251 aa14.07□□□□□ -0.16
MCF2-207ENST00000483690 F12P00748 615 aaPredicted RBP14.04□□□□□ -0.16
MCF2-207ENST00000483690 FAM160A2Q8N612 972 aaPredicted RBP14.04□□□□□ -0.16
MCF2-207ENST00000483690 ADAMTS19Q8TE59 1207 aa14.03□□□□□ -0.16
MCF2-207ENST00000483690 MAP10Q9P2G4 905 aa14.03□□□□□ -0.16
MCF2-207ENST00000483690 ZPR1O75312 459 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 DXOO77932 396 aaKnown RBP14.02□□□□□ -0.17
MCF2-207ENST00000483690 CTHP32929 405 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 SOX11P35716 441 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 PTPN5P54829 565 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 FKBPLQ9UIM3 349 aa14.02□□□□□ -0.17
MCF2-207ENST00000483690 CCNYL3P0C7X3 344 aa14.01□□□□□ -0.17
MCF2-207ENST00000483690 MTRQ99707 1265 aa14.01□□□□□ -0.17
MCF2-207ENST00000483690 ADH1BP00325 375 aa14□□□□□ -0.17
MCF2-207ENST00000483690 MMP16P51512 607 aa14□□□□□ -0.17
MCF2-207ENST00000483690 NUDT12Q9BQG2 462 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms