RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
POLR1A-207ENST00000483538 HSPA1LP34931 641 aa12.94□□□□□ -0.34
POLR1A-207ENST00000483538 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
POLR1A-207ENST00000483538 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
POLR1A-207ENST00000483538 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
POLR1A-207ENST00000483538 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
POLR1A-207ENST00000483538 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
POLR1A-207ENST00000483538 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
POLR1A-207ENST00000483538 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
POLR1A-207ENST00000483538 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
POLR1A-207ENST00000483538 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
POLR1A-207ENST00000483538 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
POLR1A-207ENST00000483538 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
POLR1A-207ENST00000483538 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
POLR1A-207ENST00000483538 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
POLR1A-207ENST00000483538 ATF3P18847 181 aa12.9□□□□□ -0.34
POLR1A-207ENST00000483538 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
POLR1A-207ENST00000483538 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
POLR1A-207ENST00000483538 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
POLR1A-207ENST00000483538 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
POLR1A-207ENST00000483538 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
POLR1A-207ENST00000483538 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
POLR1A-207ENST00000483538 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
POLR1A-207ENST00000483538 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
POLR1A-207ENST00000483538 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
POLR1A-207ENST00000483538 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
POLR1A-207ENST00000483538 PXDNQ92626 1479 aa12.86□□□□□ -0.35
POLR1A-207ENST00000483538 ATP7BP35670 1465 aa12.85□□□□□ -0.35
POLR1A-207ENST00000483538 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
POLR1A-207ENST00000483538 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
POLR1A-207ENST00000483538 COL22A1Q8NFW1 1626 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-207ENST00000483538 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
POLR1A-207ENST00000483538 ANKARQ7Z5J8 1434 aa12.84□□□□□ -0.35
POLR1A-207ENST00000483538 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
POLR1A-207ENST00000483538 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
POLR1A-207ENST00000483538 DDX17Q92841 729 aaKnown RBP12.83□□□□□ -0.36
POLR1A-207ENST00000483538 LRP6O75581 1613 aa12.83□□□□□ -0.36
POLR1A-207ENST00000483538 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
POLR1A-207ENST00000483538 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
POLR1A-207ENST00000483538 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
POLR1A-207ENST00000483538 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
POLR1A-207ENST00000483538 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
POLR1A-207ENST00000483538 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
POLR1A-207ENST00000483538 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
POLR1A-207ENST00000483538 POGKQ9P215 609 aa12.81□□□□□ -0.36
POLR1A-207ENST00000483538 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
POLR1A-207ENST00000483538 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
POLR1A-207ENST00000483538 JCADQ9P266 1359 aa12.79□□□□□ -0.36
POLR1A-207ENST00000483538 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
POLR1A-207ENST00000483538 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
POLR1A-207ENST00000483538 WASLO00401 505 aaPredicted RBP12.77□□□□□ -0.37
POLR1A-207ENST00000483538 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
POLR1A-207ENST00000483538 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
POLR1A-207ENST00000483538 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
POLR1A-207ENST00000483538 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
POLR1A-207ENST00000483538 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
POLR1A-207ENST00000483538 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
POLR1A-207ENST00000483538 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
POLR1A-207ENST00000483538 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
POLR1A-207ENST00000483538 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
POLR1A-207ENST00000483538 FOXO3O43524 673 aa12.73□□□□□ -0.37
POLR1A-207ENST00000483538 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
POLR1A-207ENST00000483538 CARD11Q9BXL7 1154 aa12.73□□□□□ -0.37
POLR1A-207ENST00000483538 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
POLR1A-207ENST00000483538 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
POLR1A-207ENST00000483538 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
POLR1A-207ENST00000483538 MYOM1P52179 1685 aa12.72□□□□□ -0.37
POLR1A-207ENST00000483538 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.37
POLR1A-207ENST00000483538 POLR3AO14802 1390 aaPredicted RBP12.71□□□□□ -0.37
POLR1A-207ENST00000483538 DISP3Q9P2K9 1392 aa12.71□□□□□ -0.37
POLR1A-207ENST00000483538 SPATA31A6Q5VVP1 1343 aa12.71□□□□□ -0.37
POLR1A-207ENST00000483538 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.37
POLR1A-207ENST00000483538 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.38
POLR1A-207ENST00000483538 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
POLR1A-207ENST00000483538 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
POLR1A-207ENST00000483538 PLCH1Q4KWH8 1693 aa12.7□□□□□ -0.38
POLR1A-207ENST00000483538 USP47Q96K76 1375 aa12.69□□□□□ -0.38
POLR1A-207ENST00000483538 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
POLR1A-207ENST00000483538 LRRC59Q96AG4 307 aaKnown RBP12.69□□□□□ -0.38
POLR1A-207ENST00000483538 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
POLR1A-207ENST00000483538 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
POLR1A-207ENST00000483538 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
POLR1A-207ENST00000483538 TESK2Q96S53 571 aa12.68□□□□□ -0.38
POLR1A-207ENST00000483538 RGS17Q9UGC6 210 aaPredicted RBP12.68□□□□□ -0.38
POLR1A-207ENST00000483538 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
POLR1A-207ENST00000483538 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
POLR1A-207ENST00000483538 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.67□□□□□ -0.38
POLR1A-207ENST00000483538 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
POLR1A-207ENST00000483538 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
POLR1A-207ENST00000483538 ACEP12821 1306 aa12.65□□□□□ -0.38
POLR1A-207ENST00000483538 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
POLR1A-207ENST00000483538 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
POLR1A-207ENST00000483538 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
POLR1A-207ENST00000483538 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
POLR1A-207ENST00000483538 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
POLR1A-207ENST00000483538 USP6P35125 1406 aa12.64□□□□□ -0.39
POLR1A-207ENST00000483538 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
POLR1A-207ENST00000483538 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
POLR1A-207ENST00000483538 ILDR2Q71H61 639 aa12.64□□□□□ -0.39
POLR1A-207ENST00000483538 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms