RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
LAPTM4A-202ENST00000483117 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
LAPTM4A-202ENST00000483117 SALL2Q9Y467 1007 aaPredicted RBP8.27□□□□□ -1.09
LAPTM4A-202ENST00000483117 GUCA2AQ02747 115 aa8.25□□□□□ -1.09
LAPTM4A-202ENST00000483117 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
LAPTM4A-202ENST00000483117 HOXA2O43364 376 aa8.24□□□□□ -1.09
LAPTM4A-202ENST00000483117 DGAT1O75907 488 aa8.24□□□□□ -1.09
LAPTM4A-202ENST00000483117 USP46P62068 366 aa8.24□□□□□ -1.09
LAPTM4A-202ENST00000483117 Q3C1V9 767 aa8.24□□□□□ -1.09
LAPTM4A-202ENST00000483117 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
LAPTM4A-202ENST00000483117 TNFRSF10AO00220 468 aa8.23□□□□□ -1.09
LAPTM4A-202ENST00000483117 NFX1Q12986 1120 aaKnown RBP8.23□□□□□ -1.09
LAPTM4A-202ENST00000483117 GDF9O60383 454 aa8.22□□□□□ -1.09
LAPTM4A-202ENST00000483117 SSTR3P32745 418 aaPredicted RBP8.22□□□□□ -1.09
LAPTM4A-202ENST00000483117 TTLL12Q14166 644 aaPredicted RBP8.22□□□□□ -1.09
LAPTM4A-202ENST00000483117 PRR20EP86478 221 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 PRR20CP86479 221 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 PRR20DP86480 221 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 PRR20BP86481 221 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 PRR20AP86496 221 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
LAPTM4A-202ENST00000483117 RPIAP49247 311 aa8.2□□□□□ -1.1
LAPTM4A-202ENST00000483117 FOXC1Q12948 553 aa8.2□□□□□ -1.1
LAPTM4A-202ENST00000483117 AMHR2Q16671 573 aa8.2□□□□□ -1.1
LAPTM4A-202ENST00000483117 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
LAPTM4A-202ENST00000483117 MMP16P51512 607 aa8.19□□□□□ -1.1
LAPTM4A-202ENST00000483117 PKD2L1Q9P0L9 805 aa8.19□□□□□ -1.1
LAPTM4A-202ENST00000483117 GIGYF2Q6Y7W6 1299 aaKnown RBP8.18□□□□□ -1.1
LAPTM4A-202ENST00000483117 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
LAPTM4A-202ENST00000483117 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
LAPTM4A-202ENST00000483117 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
LAPTM4A-202ENST00000483117 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
LAPTM4A-202ENST00000483117 TRIM66O15016 1216 aa8.16□□□□□ -1.1
LAPTM4A-202ENST00000483117 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
LAPTM4A-202ENST00000483117 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
LAPTM4A-202ENST00000483117 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
LAPTM4A-202ENST00000483117 FDX1P10109 184 aa8.15□□□□□ -1.1
LAPTM4A-202ENST00000483117 NDUFV2P19404 249 aa8.15□□□□□ -1.1
LAPTM4A-202ENST00000483117 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
LAPTM4A-202ENST00000483117 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
LAPTM4A-202ENST00000483117 MOXD2PA6NHM9 499 aa8.14□□□□□ -1.11
LAPTM4A-202ENST00000483117 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
LAPTM4A-202ENST00000483117 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
LAPTM4A-202ENST00000483117 AK7Q96M32 723 aa8.13□□□□□ -1.11
LAPTM4A-202ENST00000483117 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 MS4A1P11836 297 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 JUNDP17535 347 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 TRIM32Q13049 653 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
LAPTM4A-202ENST00000483117 ST8SIA5O15466 376 aa8.1□□□□□ -1.11
LAPTM4A-202ENST00000483117 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
LAPTM4A-202ENST00000483117 SLC24A3Q9HC58 644 aa8.1□□□□□ -1.11
LAPTM4A-202ENST00000483117 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
LAPTM4A-202ENST00000483117 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
LAPTM4A-202ENST00000483117 TBC1D2Q9BYX2 928 aa8.09□□□□□ -1.11
LAPTM4A-202ENST00000483117 WNT7AO00755 349 aa8.08□□□□□ -1.12
LAPTM4A-202ENST00000483117 PDE4DQ08499 809 aa8.08□□□□□ -1.12
LAPTM4A-202ENST00000483117 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
LAPTM4A-202ENST00000483117 TTC24A2A3L6 582 aaPredicted RBP8.07□□□□□ -1.12
LAPTM4A-202ENST00000483117 SKOR1P84550 965 aa8.07□□□□□ -1.12
LAPTM4A-202ENST00000483117 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
LAPTM4A-202ENST00000483117 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
LAPTM4A-202ENST00000483117 RSBN1LQ6PCB5 846 aaPredicted RBP8.06□□□□□ -1.12
LAPTM4A-202ENST00000483117 PRR7Q8TB68 274 aa8.06□□□□□ -1.12
LAPTM4A-202ENST00000483117 MRGPRX2Q96LB1 330 aa8.06□□□□□ -1.12
LAPTM4A-202ENST00000483117 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
LAPTM4A-202ENST00000483117 MTMR2Q13614 643 aa8.05□□□□□ -1.12
LAPTM4A-202ENST00000483117 XP32Q5T750 250 aa8.05□□□□□ -1.12
LAPTM4A-202ENST00000483117 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
LAPTM4A-202ENST00000483117 J3QL48 77 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 AVPP01185 164 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 CCNYL3P0C7X3 344 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 SMPD1P17405 629 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 DIXDC1Q155Q3 683 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 DACH1Q9UI36 760 aa8.03□□□□□ -1.12
LAPTM4A-202ENST00000483117 SPTLC1O15269 473 aa8.02□□□□□ -1.13
LAPTM4A-202ENST00000483117 WNT7BP56706 349 aa8.02□□□□□ -1.13
LAPTM4A-202ENST00000483117 PTPRNQ16849 979 aa8.02□□□□□ -1.13
LAPTM4A-202ENST00000483117 CSPP1Q1MSJ5 1256 aa8.02□□□□□ -1.13
LAPTM4A-202ENST00000483117 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.13
LAPTM4A-202ENST00000483117 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 C11orf95C9JLR9 678 aaPredicted RBP8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 HRCP23327 699 aa8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 GJA5P36382 358 aa8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 CABLES1Q8TDN4 633 aa8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
LAPTM4A-202ENST00000483117 CFAP99D6REC4 459 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 AXIN1O15169 862 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 UNC93B1Q9H1C4 597 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 EVA1BQ9NVM1 165 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 LIMD1Q9UGP4 676 aa8□□□□□ -1.13
LAPTM4A-202ENST00000483117 KRTAP9-6A0A140TA67 174 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 SH3BP2P78314 561 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 KCNH2Q12809 1159 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms