RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 C19orf44Q9H6X5 657 aa19.08■□□□□ 0.64
COL21A1-209ENST00000482933 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
COL21A1-209ENST00000482933 VGFO15240 615 aaPredicted RBP19.07■□□□□ 0.64
COL21A1-209ENST00000482933 SOCS7O14512 581 aa19.06■□□□□ 0.64
COL21A1-209ENST00000482933 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
COL21A1-209ENST00000482933 ATF3P18847 181 aa19.05■□□□□ 0.64
COL21A1-209ENST00000482933 EVX2Q03828 476 aa19.05■□□□□ 0.64
COL21A1-209ENST00000482933 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
COL21A1-209ENST00000482933 FARP1Q9Y4F1 1045 aaPredicted RBP19.04■□□□□ 0.64
COL21A1-209ENST00000482933 METP08581 1390 aa19.03■□□□□ 0.64
COL21A1-209ENST00000482933 XRN1Q8IZH2 1706 aaKnown RBP19.03■□□□□ 0.64
COL21A1-209ENST00000482933 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
COL21A1-209ENST00000482933 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
COL21A1-209ENST00000482933 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
COL21A1-209ENST00000482933 PROM2Q8N271 834 aa19■□□□□ 0.63
COL21A1-209ENST00000482933 DCCP43146 1447 aa18.99■□□□□ 0.63
COL21A1-209ENST00000482933 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
COL21A1-209ENST00000482933 PPLO60437 1756 aa18.98■□□□□ 0.63
COL21A1-209ENST00000482933 CREBZFQ9NS37 354 aa18.95■□□□□ 0.62
COL21A1-209ENST00000482933 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
COL21A1-209ENST00000482933 JCADQ9P266 1359 aa18.94■□□□□ 0.62
COL21A1-209ENST00000482933 SETD1AO15047 1707 aaKnown RBP18.94■□□□□ 0.62
COL21A1-209ENST00000482933 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
COL21A1-209ENST00000482933 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
COL21A1-209ENST00000482933 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
COL21A1-209ENST00000482933 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
COL21A1-209ENST00000482933 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
COL21A1-209ENST00000482933 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
COL21A1-209ENST00000482933 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
COL21A1-209ENST00000482933 COL16A1Q07092 1604 aaPredicted RBP18.91■□□□□ 0.62
COL21A1-209ENST00000482933 MST1RQ04912 1400 aa18.9■□□□□ 0.62
COL21A1-209ENST00000482933 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.62
COL21A1-209ENST00000482933 ADGRF5Q8IZF2 1346 aa18.89■□□□□ 0.61
COL21A1-209ENST00000482933 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
COL21A1-209ENST00000482933 CD44P16070 742 aaKnown RBP18.88■□□□□ 0.61
COL21A1-209ENST00000482933 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
COL21A1-209ENST00000482933 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
COL21A1-209ENST00000482933 IFT172Q9UG01 1749 aa18.87■□□□□ 0.61
COL21A1-209ENST00000482933 ASXL1Q8IXJ9 1541 aa18.87■□□□□ 0.61
COL21A1-209ENST00000482933 SPATA31A6Q5VVP1 1343 aa18.86■□□□□ 0.61
COL21A1-209ENST00000482933 HRCP23327 699 aa18.84■□□□□ 0.61
COL21A1-209ENST00000482933 PIK3C2GO75747 1445 aa18.83■□□□□ 0.6
COL21A1-209ENST00000482933 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
COL21A1-209ENST00000482933 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
COL21A1-209ENST00000482933 C1orf167Q5SNV9 1468 aa18.82■□□□□ 0.6
COL21A1-209ENST00000482933 LRRC59Q96AG4 307 aaKnown RBP18.81■□□□□ 0.6
COL21A1-209ENST00000482933 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
COL21A1-209ENST00000482933 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
COL21A1-209ENST00000482933 TECPR2O15040 1411 aa18.8■□□□□ 0.6
COL21A1-209ENST00000482933 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
COL21A1-209ENST00000482933 STK26Q9P289 416 aa18.79■□□□□ 0.6
COL21A1-209ENST00000482933 MYOM2P54296 1465 aa18.79■□□□□ 0.6
COL21A1-209ENST00000482933 TMEM132EQ6IEE7 984 aa18.78■□□□□ 0.6
COL21A1-209ENST00000482933 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
COL21A1-209ENST00000482933 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
COL21A1-209ENST00000482933 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.6
COL21A1-209ENST00000482933 LRP6O75581 1613 aa18.77■□□□□ 0.59
COL21A1-209ENST00000482933 NRXN1Q9ULB1 1477 aa18.76■□□□□ 0.59
COL21A1-209ENST00000482933 YTHDC2Q9H6S0 1430 aaKnown RBP18.76■□□□□ 0.59
COL21A1-209ENST00000482933 GABBR2O75899 941 aa18.75■□□□□ 0.59
COL21A1-209ENST00000482933 CLCN6P51797 869 aa18.75■□□□□ 0.59
COL21A1-209ENST00000482933 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
COL21A1-209ENST00000482933 DDX17Q92841 729 aaKnown RBP18.75■□□□□ 0.59
COL21A1-209ENST00000482933 ORAI2Q96SN7 254 aa18.75■□□□□ 0.59
COL21A1-209ENST00000482933 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
COL21A1-209ENST00000482933 SIRT1Q96EB6 747 aa18.74■□□□□ 0.59
COL21A1-209ENST00000482933 LAMC1P11047 1609 aa18.74■□□□□ 0.59
COL21A1-209ENST00000482933 DHX57Q6P158 1386 aaKnown RBP18.74■□□□□ 0.59
COL21A1-209ENST00000482933 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
COL21A1-209ENST00000482933 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
COL21A1-209ENST00000482933 CFAP70Q5T0N1 1121 aa18.74■□□□□ 0.59
COL21A1-209ENST00000482933 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
COL21A1-209ENST00000482933 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
COL21A1-209ENST00000482933 ESCO1Q5FWF5 840 aa18.72■□□□□ 0.59
COL21A1-209ENST00000482933 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
COL21A1-209ENST00000482933 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
COL21A1-209ENST00000482933 PNPLA6Q8IY17 1366 aa18.71■□□□□ 0.59
COL21A1-209ENST00000482933 PLEKHH1Q9ULM0 1364 aa18.7■□□□□ 0.58
COL21A1-209ENST00000482933 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
COL21A1-209ENST00000482933 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
COL21A1-209ENST00000482933 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
COL21A1-209ENST00000482933 NUTM2FA1L443 756 aa18.66■□□□□ 0.58
COL21A1-209ENST00000482933 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
COL21A1-209ENST00000482933 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
COL21A1-209ENST00000482933 FKBP8Q14318 412 aa18.65■□□□□ 0.58
COL21A1-209ENST00000482933 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
COL21A1-209ENST00000482933 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
COL21A1-209ENST00000482933 FOXO3O43524 673 aa18.64■□□□□ 0.57
COL21A1-209ENST00000482933 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
COL21A1-209ENST00000482933 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
COL21A1-209ENST00000482933 POGKQ9P215 609 aa18.64■□□□□ 0.57
COL21A1-209ENST00000482933 AFF2P51816 1311 aa18.63■□□□□ 0.57
COL21A1-209ENST00000482933 C8orf37Q96NL8 207 aa18.63■□□□□ 0.57
COL21A1-209ENST00000482933 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
COL21A1-209ENST00000482933 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
COL21A1-209ENST00000482933 RXRBP28702 533 aa18.61■□□□□ 0.57
COL21A1-209ENST00000482933 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL21A1-209ENST00000482933 KIF1AQ12756 1690 aa18.61■□□□□ 0.57
COL21A1-209ENST00000482933 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
COL21A1-209ENST00000482933 TRAK1Q9UPV9 953 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms