RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
CALD1-220ENST00000482470 COG3Q96JB2 828 aa11.58□□□□□ -0.56
CALD1-220ENST00000482470 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
CALD1-220ENST00000482470 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
CALD1-220ENST00000482470 GPRASP1Q5JY77 1395 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 PKNOX2Q96KN3 472 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
CALD1-220ENST00000482470 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
CALD1-220ENST00000482470 PDE3AQ14432 1141 aa11.56□□□□□ -0.56
CALD1-220ENST00000482470 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
CALD1-220ENST00000482470 IGHDP01880 384 aa11.56□□□□□ -0.56
CALD1-220ENST00000482470 NGDNQ8NEJ9 315 aaKnown RBP11.56□□□□□ -0.56
CALD1-220ENST00000482470 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
CALD1-220ENST00000482470 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
CALD1-220ENST00000482470 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
CALD1-220ENST00000482470 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
CALD1-220ENST00000482470 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
CALD1-220ENST00000482470 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
CALD1-220ENST00000482470 RPGRIP1LQ68CZ1 1315 aa11.55□□□□□ -0.56
CALD1-220ENST00000482470 RRS1Q15050 365 aaKnown RBP11.54□□□□□ -0.56
CALD1-220ENST00000482470 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
CALD1-220ENST00000482470 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
CALD1-220ENST00000482470 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
CALD1-220ENST00000482470 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
CALD1-220ENST00000482470 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
CALD1-220ENST00000482470 MAGI2Q86UL8 1455 aa11.54□□□□□ -0.56
CALD1-220ENST00000482470 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
CALD1-220ENST00000482470 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
CALD1-220ENST00000482470 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
CALD1-220ENST00000482470 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
CALD1-220ENST00000482470 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
CALD1-220ENST00000482470 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
CALD1-220ENST00000482470 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.56
CALD1-220ENST00000482470 CALD1Q05682 793 aaKnown RBP11.52□□□□□ -0.56
CALD1-220ENST00000482470 AMPHP49418 695 aa11.52□□□□□ -0.57
CALD1-220ENST00000482470 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.57
CALD1-220ENST00000482470 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
CALD1-220ENST00000482470 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.57
CALD1-220ENST00000482470 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.57
CALD1-220ENST00000482470 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
CALD1-220ENST00000482470 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
CALD1-220ENST00000482470 RTEL1-TNFRSF6BF6WH68 1400 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
CALD1-220ENST00000482470 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 ATP10AO60312 1499 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 FRAT2O75474 233 aaPredicted RBP11.5□□□□□ -0.57
CALD1-220ENST00000482470 RLBP1P12271 317 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 NME9Q86XW9 330 aa11.5□□□□□ -0.57
CALD1-220ENST00000482470 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
CALD1-220ENST00000482470 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
CALD1-220ENST00000482470 FYB1O15117 783 aa11.49□□□□□ -0.57
CALD1-220ENST00000482470 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
CALD1-220ENST00000482470 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
CALD1-220ENST00000482470 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
CALD1-220ENST00000482470 CHD1O14646 1710 aa11.48□□□□□ -0.57
CALD1-220ENST00000482470 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
CALD1-220ENST00000482470 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
CALD1-220ENST00000482470 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 ZNF518AQ6AHZ1 1483 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 ADCY10Q96PN6 1610 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 GSE1Q14687 1217 aa11.47□□□□□ -0.57
CALD1-220ENST00000482470 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
CALD1-220ENST00000482470 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.57
CALD1-220ENST00000482470 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
CALD1-220ENST00000482470 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.58
CALD1-220ENST00000482470 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.58
CALD1-220ENST00000482470 CEBPAP49715 358 aaPredicted RBP11.46□□□□□ -0.58
CALD1-220ENST00000482470 GNAI1P63096 354 aa11.46□□□□□ -0.58
CALD1-220ENST00000482470 TRIM27P14373 513 aa11.45□□□□□ -0.58
CALD1-220ENST00000482470 TWISTNBQ3B726 338 aaPredicted RBP11.45□□□□□ -0.58
CALD1-220ENST00000482470 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
CALD1-220ENST00000482470 PIK3C2GO75747 1445 aa11.45□□□□□ -0.58
CALD1-220ENST00000482470 CDC42BPBQ9Y5S2 1711 aa11.45□□□□□ -0.58
CALD1-220ENST00000482470 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
CALD1-220ENST00000482470 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
CALD1-220ENST00000482470 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
CALD1-220ENST00000482470 BLMP54132 1417 aaPredicted RBP11.44□□□□□ -0.58
CALD1-220ENST00000482470 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
CALD1-220ENST00000482470 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
CALD1-220ENST00000482470 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
CALD1-220ENST00000482470 C8orf34Q49A92 452 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 NPATQ14207 1427 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
CALD1-220ENST00000482470 FCHSD2O94868 740 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 SEC24BO95487 1268 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 ABCC1P33527 1531 aa11.43□□□□□ -0.58
CALD1-220ENST00000482470 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
CALD1-220ENST00000482470 NLRP6P59044 892 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms