RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
LINC00888-203ENST00000482098 CDK11AQ9UQ88 783 aaPredicted RBP11.78□□□□□ -0.52
LINC00888-203ENST00000482098 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
LINC00888-203ENST00000482098 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
LINC00888-203ENST00000482098 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
LINC00888-203ENST00000482098 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.53
LINC00888-203ENST00000482098 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
LINC00888-203ENST00000482098 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
LINC00888-203ENST00000482098 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
LINC00888-203ENST00000482098 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
LINC00888-203ENST00000482098 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
LINC00888-203ENST00000482098 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
LINC00888-203ENST00000482098 C3P01024 1663 aa11.75□□□□□ -0.53
LINC00888-203ENST00000482098 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
LINC00888-203ENST00000482098 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
LINC00888-203ENST00000482098 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
LINC00888-203ENST00000482098 TOM1O60784 492 aa11.74□□□□□ -0.53
LINC00888-203ENST00000482098 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
LINC00888-203ENST00000482098 EVI5O60447 810 aa11.73□□□□□ -0.53
LINC00888-203ENST00000482098 HSPA1LP34931 641 aa11.73□□□□□ -0.53
LINC00888-203ENST00000482098 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
LINC00888-203ENST00000482098 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
LINC00888-203ENST00000482098 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
LINC00888-203ENST00000482098 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
LINC00888-203ENST00000482098 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
LINC00888-203ENST00000482098 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
LINC00888-203ENST00000482098 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
LINC00888-203ENST00000482098 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
LINC00888-203ENST00000482098 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
LINC00888-203ENST00000482098 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
LINC00888-203ENST00000482098 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
LINC00888-203ENST00000482098 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
LINC00888-203ENST00000482098 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
LINC00888-203ENST00000482098 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
LINC00888-203ENST00000482098 ZNF330Q9Y3S2 320 aaPredicted RBP11.7□□□□□ -0.54
LINC00888-203ENST00000482098 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
LINC00888-203ENST00000482098 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
LINC00888-203ENST00000482098 EEA1Q15075 1411 aa11.69□□□□□ -0.54
LINC00888-203ENST00000482098 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
LINC00888-203ENST00000482098 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
LINC00888-203ENST00000482098 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
LINC00888-203ENST00000482098 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
LINC00888-203ENST00000482098 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
LINC00888-203ENST00000482098 CLIP1P30622 1438 aa11.68□□□□□ -0.54
LINC00888-203ENST00000482098 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
LINC00888-203ENST00000482098 PDE4CQ08493 712 aa11.67□□□□□ -0.54
LINC00888-203ENST00000482098 CPS1P31327 1500 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00888-203ENST00000482098 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
LINC00888-203ENST00000482098 KIF14Q15058 1648 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 PTPRKQ15262 1439 aa11.66□□□□□ -0.54
LINC00888-203ENST00000482098 PPP1R15AO75807 674 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-203ENST00000482098 MAP3K7O43318 606 aa11.64□□□□□ -0.55
LINC00888-203ENST00000482098 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
LINC00888-203ENST00000482098 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
LINC00888-203ENST00000482098 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
LINC00888-203ENST00000482098 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
LINC00888-203ENST00000482098 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
LINC00888-203ENST00000482098 EPAS1Q99814 870 aa11.64□□□□□ -0.55
LINC00888-203ENST00000482098 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
LINC00888-203ENST00000482098 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
LINC00888-203ENST00000482098 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
LINC00888-203ENST00000482098 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
LINC00888-203ENST00000482098 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
LINC00888-203ENST00000482098 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
LINC00888-203ENST00000482098 ABCC1P33527 1531 aa11.63□□□□□ -0.55
LINC00888-203ENST00000482098 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
LINC00888-203ENST00000482098 OATP04181 439 aa11.62□□□□□ -0.55
LINC00888-203ENST00000482098 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
LINC00888-203ENST00000482098 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
LINC00888-203ENST00000482098 RFC5P40937 340 aa11.61□□□□□ -0.55
LINC00888-203ENST00000482098 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
LINC00888-203ENST00000482098 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
LINC00888-203ENST00000482098 PHF14O94880 888 aa11.6□□□□□ -0.55
LINC00888-203ENST00000482098 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
LINC00888-203ENST00000482098 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
LINC00888-203ENST00000482098 PRM3Q9NNZ6 103 aa11.6□□□□□ -0.55
LINC00888-203ENST00000482098 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
LINC00888-203ENST00000482098 MYO3AQ8NEV4 1616 aa11.59□□□□□ -0.55
LINC00888-203ENST00000482098 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
LINC00888-203ENST00000482098 PATL2C9JE40 543 aaKnown RBP11.58□□□□□ -0.56
LINC00888-203ENST00000482098 IER5LQ5T953 404 aa11.58□□□□□ -0.56
LINC00888-203ENST00000482098 METTL3Q86U44 580 aaKnown RBP11.58□□□□□ -0.56
LINC00888-203ENST00000482098 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
LINC00888-203ENST00000482098 CALR3Q96L12 384 aaKnown RBP11.58□□□□□ -0.56
LINC00888-203ENST00000482098 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
LINC00888-203ENST00000482098 ANKLE2Q86XL3 938 aa11.57□□□□□ -0.56
LINC00888-203ENST00000482098 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
LINC00888-203ENST00000482098 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
LINC00888-203ENST00000482098 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
LINC00888-203ENST00000482098 PREX2Q70Z35 1606 aa11.57□□□□□ -0.56
LINC00888-203ENST00000482098 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
LINC00888-203ENST00000482098 SAMD9LQ8IVG5 1584 aa11.56□□□□□ -0.56
LINC00888-203ENST00000482098 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
LINC00888-203ENST00000482098 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
LINC00888-203ENST00000482098 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
LINC00888-203ENST00000482098 PLXNC1O60486 1568 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms