RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 GRIN2AQ12879 1464 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
SIK3-210ENST00000480468 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
SIK3-210ENST00000480468 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 UNC13BO14795 1591 aa13.36□□□□□ -0.27
SIK3-210ENST00000480468 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
SIK3-210ENST00000480468 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
SIK3-210ENST00000480468 MYOM1P52179 1685 aa13.35□□□□□ -0.27
SIK3-210ENST00000480468 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
SIK3-210ENST00000480468 KANK1Q14678 1352 aa13.34□□□□□ -0.27
SIK3-210ENST00000480468 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
SIK3-210ENST00000480468 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
SIK3-210ENST00000480468 RLBP1P12271 317 aa13.33□□□□□ -0.27
SIK3-210ENST00000480468 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.27
SIK3-210ENST00000480468 RGL3Q3MIN7 710 aa13.33□□□□□ -0.27
SIK3-210ENST00000480468 GOLGA6L22H0YM25 854 aa13.33□□□□□ -0.28
SIK3-210ENST00000480468 MCM5P33992 734 aa13.33□□□□□ -0.28
SIK3-210ENST00000480468 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
SIK3-210ENST00000480468 UTP14CQ5TAP6 766 aaKnown RBP13.33□□□□□ -0.28
SIK3-210ENST00000480468 ZNF445P59923 1031 aa13.32□□□□□ -0.28
SIK3-210ENST00000480468 HDAC1Q13547 482 aaPredicted RBP13.32□□□□□ -0.28
SIK3-210ENST00000480468 POLR3AO14802 1390 aaPredicted RBP13.32□□□□□ -0.28
SIK3-210ENST00000480468 PDLIM2Q96JY6 352 aa13.32□□□□□ -0.28
SIK3-210ENST00000480468 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
SIK3-210ENST00000480468 FAM13BQ9NYF5 915 aa13.32□□□□□ -0.28
SIK3-210ENST00000480468 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
SIK3-210ENST00000480468 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
SIK3-210ENST00000480468 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
SIK3-210ENST00000480468 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
SIK3-210ENST00000480468 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
SIK3-210ENST00000480468 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
SIK3-210ENST00000480468 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
SIK3-210ENST00000480468 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
SIK3-210ENST00000480468 MADDQ8WXG6 1647 aa13.3□□□□□ -0.28
SIK3-210ENST00000480468 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
SIK3-210ENST00000480468 UQCRHLA0A096LP55 91 aa13.29□□□□□ -0.28
SIK3-210ENST00000480468 UQCRHP07919 91 aa13.29□□□□□ -0.28
SIK3-210ENST00000480468 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
SIK3-210ENST00000480468 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
SIK3-210ENST00000480468 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SIK3-210ENST00000480468 MAST1Q9Y2H9 1570 aa13.27□□□□□ -0.28
SIK3-210ENST00000480468 STAC3Q96MF2 364 aa13.27□□□□□ -0.28
SIK3-210ENST00000480468 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.28
SIK3-210ENST00000480468 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.29
SIK3-210ENST00000480468 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
SIK3-210ENST00000480468 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
SIK3-210ENST00000480468 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.29
SIK3-210ENST00000480468 DMTNQ08495 405 aa13.27□□□□□ -0.29
SIK3-210ENST00000480468 SASS6Q6UVJ0 657 aa13.27□□□□□ -0.29
SIK3-210ENST00000480468 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
SIK3-210ENST00000480468 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
SIK3-210ENST00000480468 CCDC94Q9BW85 323 aaPredicted RBP13.26□□□□□ -0.29
SIK3-210ENST00000480468 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
SIK3-210ENST00000480468 DDX49Q9Y6V7 483 aaKnown RBP13.26□□□□□ -0.29
SIK3-210ENST00000480468 TTC37Q6PGP7 1564 aa13.26□□□□□ -0.29
SIK3-210ENST00000480468 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
SIK3-210ENST00000480468 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
SIK3-210ENST00000480468 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
SIK3-210ENST00000480468 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
SIK3-210ENST00000480468 CEP152O94986 1710 aa13.25□□□□□ -0.29
SIK3-210ENST00000480468 BAG4O95429 457 aaKnown RBP13.25□□□□□ -0.29
SIK3-210ENST00000480468 DZIP1LQ8IYY4 767 aaKnown RBP13.25□□□□□ -0.29
SIK3-210ENST00000480468 KIF2CQ99661 725 aa13.25□□□□□ -0.29
SIK3-210ENST00000480468 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
SIK3-210ENST00000480468 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
SIK3-210ENST00000480468 ABCA8O94911 1581 aa13.24□□□□□ -0.29
SIK3-210ENST00000480468 FGD1P98174 961 aa13.24□□□□□ -0.29
SIK3-210ENST00000480468 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
SIK3-210ENST00000480468 SSFA2P28290 1259 aa13.23□□□□□ -0.29
SIK3-210ENST00000480468 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
SIK3-210ENST00000480468 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
SIK3-210ENST00000480468 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
SIK3-210ENST00000480468 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
SIK3-210ENST00000480468 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
SIK3-210ENST00000480468 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
SIK3-210ENST00000480468 BMP2KLQ5H9B9 411 aa13.22□□□□□ -0.29
SIK3-210ENST00000480468 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
SIK3-210ENST00000480468 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.29
SIK3-210ENST00000480468 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
SIK3-210ENST00000480468 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
SIK3-210ENST00000480468 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
SIK3-210ENST00000480468 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
SIK3-210ENST00000480468 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
SIK3-210ENST00000480468 NUCB1Q02818 461 aa13.21□□□□□ -0.29
SIK3-210ENST00000480468 GTPBP4Q9BZE4 634 aaKnown RBP13.21□□□□□ -0.29
SIK3-210ENST00000480468 REREQ9P2R6 1566 aa13.21□□□□□ -0.3
SIK3-210ENST00000480468 NUCB2P80303 420 aa13.2□□□□□ -0.3
SIK3-210ENST00000480468 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
SIK3-210ENST00000480468 RBSNQ9H1K0 784 aa13.2□□□□□ -0.3
SIK3-210ENST00000480468 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
SIK3-210ENST00000480468 KIF20AO95235 890 aa13.19□□□□□ -0.3
SIK3-210ENST00000480468 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
SIK3-210ENST00000480468 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
SIK3-210ENST00000480468 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
SIK3-210ENST00000480468 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
SIK3-210ENST00000480468 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
SIK3-210ENST00000480468 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 253.7 ms