RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
VTI1A-204ENST00000480057 USP32Q8NFA0 1604 aa14.98□□□□□ -0.01
VTI1A-204ENST00000480057 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
VTI1A-204ENST00000480057 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
VTI1A-204ENST00000480057 ATAD2Q6PL18 1390 aa14.97□□□□□ -0.01
VTI1A-204ENST00000480057 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-204ENST00000480057 PRAM1Q96QH2 718 aa14.96□□□□□ -0.01
VTI1A-204ENST00000480057 POGKQ9P215 609 aa14.96□□□□□ -0.01
VTI1A-204ENST00000480057 STK26Q9P289 416 aa14.96□□□□□ -0.01
VTI1A-204ENST00000480057 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
VTI1A-204ENST00000480057 CCDC184Q52MB2 194 aa14.95□□□□□ -0.02
VTI1A-204ENST00000480057 TXNDC2Q86VQ3 553 aa14.95□□□□□ -0.02
VTI1A-204ENST00000480057 METP08581 1390 aa14.95□□□□□ -0.02
VTI1A-204ENST00000480057 INSRP06213 1382 aa14.94□□□□□ -0.02
VTI1A-204ENST00000480057 LTKP29376 864 aa14.93□□□□□ -0.02
VTI1A-204ENST00000480057 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
VTI1A-204ENST00000480057 ANKRD36BQ8N2N9 1353 aa14.93□□□□□ -0.02
VTI1A-204ENST00000480057 TBX22Q9Y458 520 aa14.92□□□□□ -0.02
VTI1A-204ENST00000480057 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
VTI1A-204ENST00000480057 PIK3R4Q99570 1358 aa14.91□□□□□ -0.02
VTI1A-204ENST00000480057 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
VTI1A-204ENST00000480057 NSD2O96028 1365 aa14.9□□□□□ -0.02
VTI1A-204ENST00000480057 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
VTI1A-204ENST00000480057 BCANQ96GW7 911 aa14.89□□□□□ -0.03
VTI1A-204ENST00000480057 CARD14Q9BXL6 1004 aa14.89□□□□□ -0.03
VTI1A-204ENST00000480057 PTCH1Q13635 1447 aa14.89□□□□□ -0.03
VTI1A-204ENST00000480057 SLC12A5Q9H2X9 1139 aa14.88□□□□□ -0.03
VTI1A-204ENST00000480057 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
VTI1A-204ENST00000480057 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-204ENST00000480057 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
VTI1A-204ENST00000480057 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
VTI1A-204ENST00000480057 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
VTI1A-204ENST00000480057 ATP7BP35670 1465 aa14.87□□□□□ -0.03
VTI1A-204ENST00000480057 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
VTI1A-204ENST00000480057 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 CABP2Q9NPB3 220 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 CGNL1Q0VF96 1302 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 ZBED9Q6R2W3 1325 aa14.86□□□□□ -0.03
VTI1A-204ENST00000480057 XRN1Q8IZH2 1706 aaKnown RBP14.86□□□□□ -0.03
VTI1A-204ENST00000480057 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
VTI1A-204ENST00000480057 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
VTI1A-204ENST00000480057 WASLO00401 505 aaPredicted RBP14.84□□□□□ -0.03
VTI1A-204ENST00000480057 CNGB1Q14028 1251 aaPredicted RBP14.84□□□□□ -0.03
VTI1A-204ENST00000480057 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
VTI1A-204ENST00000480057 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
VTI1A-204ENST00000480057 PTPRUQ92729 1446 aa14.83□□□□□ -0.03
VTI1A-204ENST00000480057 CD163L1Q9NR16 1453 aa14.83□□□□□ -0.03
VTI1A-204ENST00000480057 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
VTI1A-204ENST00000480057 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-204ENST00000480057 ANKRD26Q9UPS8 1709 aa14.82□□□□□ -0.04
VTI1A-204ENST00000480057 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-204ENST00000480057 SLC26A8Q96RN1 970 aa14.8□□□□□ -0.04
VTI1A-204ENST00000480057 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
VTI1A-204ENST00000480057 BLMP54132 1417 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-204ENST00000480057 CPSF1Q10570 1443 aaKnown RBP14.79□□□□□ -0.04
VTI1A-204ENST00000480057 CDC42BPGQ6DT37 1551 aa14.79□□□□□ -0.04
VTI1A-204ENST00000480057 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
VTI1A-204ENST00000480057 CHD2O14647 1828 aaKnown RBP14.78□□□□□ -0.04
VTI1A-204ENST00000480057 TOPAZ1Q8N9V7 1692 aa14.78□□□□□ -0.04
VTI1A-204ENST00000480057 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-204ENST00000480057 MORC1Q86VD1 984 aa14.78□□□□□ -0.04
VTI1A-204ENST00000480057 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
VTI1A-204ENST00000480057 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
VTI1A-204ENST00000480057 KIF20BQ96Q89 1820 aa14.77□□□□□ -0.05
VTI1A-204ENST00000480057 NPHP4O75161 1426 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-204ENST00000480057 PPIP5K1Q6PFW1 1433 aa14.76□□□□□ -0.05
VTI1A-204ENST00000480057 AKAP12Q02952 1782 aa14.76□□□□□ -0.05
VTI1A-204ENST00000480057 MON2Q7Z3U7 1717 aa14.76□□□□□ -0.05
VTI1A-204ENST00000480057 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
VTI1A-204ENST00000480057 CABP1Q9NZU7 370 aa14.76□□□□□ -0.05
VTI1A-204ENST00000480057 EDC4Q6P2E9 1401 aaKnown RBP14.75□□□□□ -0.05
VTI1A-204ENST00000480057 ITSN1Q15811 1721 aa14.75□□□□□ -0.05
VTI1A-204ENST00000480057 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-204ENST00000480057 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
VTI1A-204ENST00000480057 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
VTI1A-204ENST00000480057 NWD1Q149M9 1564 aa14.73□□□□□ -0.05
VTI1A-204ENST00000480057 PLEKHG3A1L390 1219 aa14.72□□□□□ -0.05
VTI1A-204ENST00000480057 PRR36Q9H6K5 1346 aa14.71□□□□□ -0.05
VTI1A-204ENST00000480057 FYB1O15117 783 aa14.71□□□□□ -0.05
VTI1A-204ENST00000480057 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
VTI1A-204ENST00000480057 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
VTI1A-204ENST00000480057 KCNA6P17658 529 aa14.7□□□□□ -0.06
VTI1A-204ENST00000480057 PDE3BQ13370 1112 aa14.7□□□□□ -0.06
VTI1A-204ENST00000480057 NGEFQ8N5V2 710 aa14.7□□□□□ -0.06
VTI1A-204ENST00000480057 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
VTI1A-204ENST00000480057 NRKQ7Z2Y5 1582 aa14.69□□□□□ -0.06
VTI1A-204ENST00000480057 SHPRHQ149N8 1683 aa14.68□□□□□ -0.06
VTI1A-204ENST00000480057 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
VTI1A-204ENST00000480057 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
VTI1A-204ENST00000480057 AATKQ6ZMQ8 1374 aa14.66□□□□□ -0.06
VTI1A-204ENST00000480057 MTHFSP49914 203 aa14.66□□□□□ -0.06
VTI1A-204ENST00000480057 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
VTI1A-204ENST00000480057 USP6P35125 1406 aa14.66□□□□□ -0.06
VTI1A-204ENST00000480057 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
VTI1A-204ENST00000480057 GGNBP2Q9H3C7 697 aa14.65□□□□□ -0.06
VTI1A-204ENST00000480057 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
VTI1A-204ENST00000480057 PNPLA6Q8IY17 1366 aa14.64□□□□□ -0.07
VTI1A-204ENST00000480057 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms