RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 KRT28Q7Z3Y7 464 aa7.68□□□□□ -1.18
CPS1-207ENST00000479988 TBX22Q9Y458 520 aa7.68□□□□□ -1.18
CPS1-207ENST00000479988 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
CPS1-207ENST00000479988 RALGAPBQ86X10 1494 aa7.68□□□□□ -1.18
CPS1-207ENST00000479988 RIMS2Q9UQ26 1411 aa7.68□□□□□ -1.18
CPS1-207ENST00000479988 TATP17735 454 aaPredicted RBP7.68□□□□□ -1.18
CPS1-207ENST00000479988 YEATS2Q9ULM3 1422 aa7.67□□□□□ -1.18
CPS1-207ENST00000479988 ERCC6L2Q5T890 1561 aa7.67□□□□□ -1.18
CPS1-207ENST00000479988 LRRIQ1Q96JM4 1722 aa7.67□□□□□ -1.18
CPS1-207ENST00000479988 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
CPS1-207ENST00000479988 MBD5Q9P267 1494 aa7.66□□□□□ -1.18
CPS1-207ENST00000479988 CERKQ8TCT0 537 aa7.66□□□□□ -1.18
CPS1-207ENST00000479988 NUDT16Q96DE0 195 aaKnown RBP7.66□□□□□ -1.18
CPS1-207ENST00000479988 NGEFQ8N5V2 710 aa7.66□□□□□ -1.18
CPS1-207ENST00000479988 WAPLQ7Z5K2 1190 aa7.66□□□□□ -1.18
CPS1-207ENST00000479988 ATP7AQ04656 1500 aa7.66□□□□□ -1.18
CPS1-207ENST00000479988 ATAD2Q6PL18 1390 aa7.65□□□□□ -1.18
CPS1-207ENST00000479988 STK31Q9BXU1 1019 aa7.65□□□□□ -1.19
CPS1-207ENST00000479988 DDX54Q8TDD1 881 aaKnown RBP7.64□□□□□ -1.19
CPS1-207ENST00000479988 FBXO3Q9UK99 471 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 DISP3Q9P2K9 1392 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 NBPF14Q5TI25 921 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 CABP1Q9NZU7 370 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 SLAIN2Q9P270 581 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 KDM5DQ9BY66 1539 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 ZCCHC11Q5TAX3 1644 aaKnown RBP7.64□□□□□ -1.19
CPS1-207ENST00000479988 C11orf95C9JLR9 678 aaPredicted RBP7.64□□□□□ -1.19
CPS1-207ENST00000479988 PANK3Q9H999 370 aa7.64□□□□□ -1.19
CPS1-207ENST00000479988 PLEKHO1Q53GL0 409 aaPredicted RBP7.63□□□□□ -1.19
CPS1-207ENST00000479988 BCL11BQ9C0K0 894 aaPredicted RBP7.63□□□□□ -1.19
CPS1-207ENST00000479988 SPG7Q9UQ90 795 aa7.63□□□□□ -1.19
CPS1-207ENST00000479988 HDAC5Q9UQL6 1122 aa7.63□□□□□ -1.19
CPS1-207ENST00000479988 TAF7LQ5H9L4 462 aa7.62□□□□□ -1.19
CPS1-207ENST00000479988 ZNF772Q68DY9 489 aaPredicted RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 CHMP4BQ9H444 224 aaKnown RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 SPATA31E1Q6ZUB1 1445 aa7.62□□□□□ -1.19
CPS1-207ENST00000479988 PREX2Q70Z35 1606 aa7.62□□□□□ -1.19
CPS1-207ENST00000479988 ANP32AP39687 249 aaKnown RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 IRX6P78412 446 aaPredicted RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 OS9Q13438 667 aaPredicted RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 GGNBP2Q9H3C7 697 aa7.62□□□□□ -1.19
CPS1-207ENST00000479988 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 EXOC5O00471 708 aa7.62□□□□□ -1.19
CPS1-207ENST00000479988 HSP90AB1P08238 724 aaKnown RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 PNISRQ8TF01 805 aaKnown RBP7.62□□□□□ -1.19
CPS1-207ENST00000479988 CDC42BPAQ5VT25 1732 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 DIAPH1O60610 1272 aaKnown RBP7.61□□□□□ -1.19
CPS1-207ENST00000479988 NBPF1Q3BBV0 1214 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 FTSJ3Q8IY81 847 aaKnown RBP7.61□□□□□ -1.19
CPS1-207ENST00000479988 MAST1Q9Y2H9 1570 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.61□□□□□ -1.19
CPS1-207ENST00000479988 ARAP3Q8WWN8 1544 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 MLH3Q9UHC1 1453 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 NPHP4O75161 1426 aaPredicted RBP7.61□□□□□ -1.19
CPS1-207ENST00000479988 NOS1P29475 1434 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 PRAG1Q86YV5 1406 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 RBM42Q9BTD8 480 aaKnown RBP7.61□□□□□ -1.19
CPS1-207ENST00000479988 EIF2AK4Q9P2K8 1649 aaKnown RBP7.61□□□□□ -1.19
CPS1-207ENST00000479988 MYO5CQ9NQX4 1742 aa7.61□□□□□ -1.19
CPS1-207ENST00000479988 RCAN3Q9UKA8 241 aa7.6□□□□□ -1.19
CPS1-207ENST00000479988 TMEM2Q9UHN6 1383 aa7.6□□□□□ -1.19
CPS1-207ENST00000479988 ZNF335Q9H4Z2 1342 aaPredicted RBP7.6□□□□□ -1.19
CPS1-207ENST00000479988 SAMD9LQ8IVG5 1584 aa7.6□□□□□ -1.19
CPS1-207ENST00000479988 MS4A1P11836 297 aa7.59□□□□□ -1.19
CPS1-207ENST00000479988 TSHZ2Q9NRE2 1034 aa7.59□□□□□ -1.19
CPS1-207ENST00000479988 BAG6P46379 1132 aa7.59□□□□□ -1.19
CPS1-207ENST00000479988 CROCC2H7BZ55 1655 aa7.59□□□□□ -1.19
CPS1-207ENST00000479988 ADGRF5Q8IZF2 1346 aa7.59□□□□□ -1.19
CPS1-207ENST00000479988 C14orf93Q9H972 538 aaKnown RBP7.58□□□□□ -1.2
CPS1-207ENST00000479988 USP21Q9UK80 565 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 CHMP3Q9Y3E7 222 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 TMEM94Q12767 1356 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 RXRBP28702 533 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 CABP4P57796 275 aa7.58□□□□□ -1.2
CPS1-207ENST00000479988 PLXNC1O60486 1568 aa7.57□□□□□ -1.2
CPS1-207ENST00000479988 SHROOM2Q13796 1616 aa7.57□□□□□ -1.2
CPS1-207ENST00000479988 SCAF11Q99590 1463 aaKnown RBP7.57□□□□□ -1.2
CPS1-207ENST00000479988 FRAT2O75474 233 aaPredicted RBP7.57□□□□□ -1.2
CPS1-207ENST00000479988 HSP90B1P14625 803 aaKnown RBP7.57□□□□□ -1.2
CPS1-207ENST00000479988 CDK11BP21127 795 aaKnown RBP7.57□□□□□ -1.2
CPS1-207ENST00000479988 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
CPS1-207ENST00000479988 NEXNQ0ZGT2 675 aa7.57□□□□□ -1.2
CPS1-207ENST00000479988 SLC12A5Q9H2X9 1139 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 HECW2Q9P2P5 1572 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 TRPC5Q9UL62 973 aaPredicted RBP7.56□□□□□ -1.2
CPS1-207ENST00000479988 CHRNA2Q15822 529 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 DDB1Q16531 1140 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
CPS1-207ENST00000479988 ZNF530Q6P9A1 599 aaPredicted RBP7.56□□□□□ -1.2
CPS1-207ENST00000479988 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
CPS1-207ENST00000479988 ABCC1P33527 1531 aa7.55□□□□□ -1.2
CPS1-207ENST00000479988 POLD1P28340 1107 aa7.55□□□□□ -1.2
CPS1-207ENST00000479988 UGGT1Q9NYU2 1555 aa7.55□□□□□ -1.2
CPS1-207ENST00000479988 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
CPS1-207ENST00000479988 INSRP06213 1382 aa7.55□□□□□ -1.2
CPS1-207ENST00000479988 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
CPS1-207ENST00000479988 TTC37Q6PGP7 1564 aa7.55□□□□□ -1.2
CPS1-207ENST00000479988 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms