RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
PDZRN3-208ENST00000479530 FRMPD1Q5SYB0 1578 aa17.17■□□□□ 0.34
PDZRN3-208ENST00000479530 POGKQ9P215 609 aa17.17■□□□□ 0.34
PDZRN3-208ENST00000479530 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-208ENST00000479530 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
PDZRN3-208ENST00000479530 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
PDZRN3-208ENST00000479530 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
PDZRN3-208ENST00000479530 POGZQ7Z3K3 1410 aa17.16■□□□□ 0.34
PDZRN3-208ENST00000479530 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-208ENST00000479530 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
PDZRN3-208ENST00000479530 KIF1BO60333 1816 aa17.14■□□□□ 0.33
PDZRN3-208ENST00000479530 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
PDZRN3-208ENST00000479530 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
PDZRN3-208ENST00000479530 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
PDZRN3-208ENST00000479530 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
PDZRN3-208ENST00000479530 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
PDZRN3-208ENST00000479530 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
PDZRN3-208ENST00000479530 STK26Q9P289 416 aa17.12■□□□□ 0.33
PDZRN3-208ENST00000479530 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
PDZRN3-208ENST00000479530 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
PDZRN3-208ENST00000479530 MTHFSP49914 203 aa17.11■□□□□ 0.33
PDZRN3-208ENST00000479530 IDI1Q13907 227 aa17.11■□□□□ 0.33
PDZRN3-208ENST00000479530 IFT172Q9UG01 1749 aa17.11■□□□□ 0.33
PDZRN3-208ENST00000479530 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
PDZRN3-208ENST00000479530 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
PDZRN3-208ENST00000479530 E9PSI1 815 aa17.1■□□□□ 0.33
PDZRN3-208ENST00000479530 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
PDZRN3-208ENST00000479530 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
PDZRN3-208ENST00000479530 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
PDZRN3-208ENST00000479530 VIRMAQ69YN4 1812 aaKnown RBP17.08■□□□□ 0.33
PDZRN3-208ENST00000479530 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.33
PDZRN3-208ENST00000479530 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-208ENST00000479530 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
PDZRN3-208ENST00000479530 ABCC3O15438 1527 aa17.07■□□□□ 0.32
PDZRN3-208ENST00000479530 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
PDZRN3-208ENST00000479530 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
PDZRN3-208ENST00000479530 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
PDZRN3-208ENST00000479530 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-208ENST00000479530 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
PDZRN3-208ENST00000479530 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
PDZRN3-208ENST00000479530 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 ARXQ96QS3 562 aa17.04■□□□□ 0.32
PDZRN3-208ENST00000479530 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
PDZRN3-208ENST00000479530 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
PDZRN3-208ENST00000479530 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
PDZRN3-208ENST00000479530 RRAGDQ9NQL2 400 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-208ENST00000479530 HECW2Q9P2P5 1572 aa17.03■□□□□ 0.32
PDZRN3-208ENST00000479530 PPLO60437 1756 aa17.02■□□□□ 0.32
PDZRN3-208ENST00000479530 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
PDZRN3-208ENST00000479530 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
PDZRN3-208ENST00000479530 RLBP1P12271 317 aa17.02■□□□□ 0.31
PDZRN3-208ENST00000479530 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.31
PDZRN3-208ENST00000479530 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
PDZRN3-208ENST00000479530 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
PDZRN3-208ENST00000479530 BECN1Q14457 450 aa17.01■□□□□ 0.31
PDZRN3-208ENST00000479530 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
PDZRN3-208ENST00000479530 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
PDZRN3-208ENST00000479530 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
PDZRN3-208ENST00000479530 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
PDZRN3-208ENST00000479530 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
PDZRN3-208ENST00000479530 SRPK2P78362 688 aaKnown RBP17■□□□□ 0.31
PDZRN3-208ENST00000479530 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
PDZRN3-208ENST00000479530 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
PDZRN3-208ENST00000479530 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
PDZRN3-208ENST00000479530 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
PDZRN3-208ENST00000479530 FBLN1P23142 703 aa16.98■□□□□ 0.31
PDZRN3-208ENST00000479530 TBC1D32Q96NH3 1257 aa16.98■□□□□ 0.31
PDZRN3-208ENST00000479530 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
PDZRN3-208ENST00000479530 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
PDZRN3-208ENST00000479530 SHPRHQ149N8 1683 aa16.98■□□□□ 0.31
PDZRN3-208ENST00000479530 GLI2P10070 1586 aa16.97■□□□□ 0.31
PDZRN3-208ENST00000479530 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
PDZRN3-208ENST00000479530 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
PDZRN3-208ENST00000479530 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
PDZRN3-208ENST00000479530 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
PDZRN3-208ENST00000479530 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.3
PDZRN3-208ENST00000479530 CAMSAP1Q5T5Y3 1602 aa16.95■□□□□ 0.3
PDZRN3-208ENST00000479530 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-208ENST00000479530 DIP2CQ9Y2E4 1556 aa16.95■□□□□ 0.3
PDZRN3-208ENST00000479530 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-208ENST00000479530 CFAP53Q96M91 514 aa16.94■□□□□ 0.3
PDZRN3-208ENST00000479530 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-208ENST00000479530 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
PDZRN3-208ENST00000479530 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 FYB1O15117 783 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 NEO1Q92859 1461 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
PDZRN3-208ENST00000479530 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
PDZRN3-208ENST00000479530 PMFBP1Q8TBY8 1022 aa16.92■□□□□ 0.3
PDZRN3-208ENST00000479530 UPF2Q9HAU5 1272 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-208ENST00000479530 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
PDZRN3-208ENST00000479530 PIK3C2BO00750 1634 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms