RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
CCDC171-207ENST00000478913 MORN1Q5T089 497 aa10.39□□□□□ -0.75
CCDC171-207ENST00000478913 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC171-207ENST00000478913 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
CCDC171-207ENST00000478913 GFRA3O60609 400 aa10.36□□□□□ -0.75
CCDC171-207ENST00000478913 BLOC1S3Q6QNY0 202 aa10.36□□□□□ -0.75
CCDC171-207ENST00000478913 PCDHGC3Q9UN70 934 aa10.36□□□□□ -0.75
CCDC171-207ENST00000478913 SOCS7O14512 581 aa10.35□□□□□ -0.75
CCDC171-207ENST00000478913 NR1I2O75469 434 aa10.35□□□□□ -0.75
CCDC171-207ENST00000478913 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
CCDC171-207ENST00000478913 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
CCDC171-207ENST00000478913 NUTM2BA6NNL0 878 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-207ENST00000478913 NUTM2EB1AL46 878 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-207ENST00000478913 COPS2P61201 443 aa10.34□□□□□ -0.75
CCDC171-207ENST00000478913 QPCTQ16769 361 aa10.34□□□□□ -0.75
CCDC171-207ENST00000478913 Q3C1V9 767 aa10.34□□□□□ -0.75
CCDC171-207ENST00000478913 NUTM2DQ5VT03 806 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-207ENST00000478913 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
CCDC171-207ENST00000478913 NUTM2AQ8IVF1 878 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-207ENST00000478913 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
CCDC171-207ENST00000478913 LILRB3O75022 631 aa10.33□□□□□ -0.76
CCDC171-207ENST00000478913 MTMR2Q13614 643 aa10.33□□□□□ -0.76
CCDC171-207ENST00000478913 CABLES1Q8TDN4 633 aa10.33□□□□□ -0.76
CCDC171-207ENST00000478913 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
CCDC171-207ENST00000478913 HRCP23327 699 aa10.32□□□□□ -0.76
CCDC171-207ENST00000478913 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
CCDC171-207ENST00000478913 PPP2R2DQ66LE6 453 aa10.31□□□□□ -0.76
CCDC171-207ENST00000478913 SCUBE3Q8IX30 993 aa10.31□□□□□ -0.76
CCDC171-207ENST00000478913 SPDYE5A6NIY4 337 aa10.3□□□□□ -0.76
CCDC171-207ENST00000478913 RFC5P40937 340 aa10.3□□□□□ -0.76
CCDC171-207ENST00000478913 KCNC4Q03721 635 aa10.3□□□□□ -0.76
CCDC171-207ENST00000478913 MTRQ99707 1265 aa10.3□□□□□ -0.76
CCDC171-207ENST00000478913 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-207ENST00000478913 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-207ENST00000478913 FBXO31Q5XUX0 539 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-207ENST00000478913 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
CCDC171-207ENST00000478913 SYMPKQ92797 1274 aaKnown RBP10.29□□□□□ -0.76
CCDC171-207ENST00000478913 LMTK3Q96Q04 1460 aa10.29□□□□□ -0.76
CCDC171-207ENST00000478913 RETREG3Q86VR2 466 aa10.28□□□□□ -0.76
CCDC171-207ENST00000478913 IL21Q9HBE4 155 aa10.28□□□□□ -0.76
CCDC171-207ENST00000478913 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
CCDC171-207ENST00000478913 ZPR1O75312 459 aa10.26□□□□□ -0.77
CCDC171-207ENST00000478913 TJAP1Q5JTD0 557 aa10.26□□□□□ -0.77
CCDC171-207ENST00000478913 BRICD5Q6PL45 260 aa10.26□□□□□ -0.77
CCDC171-207ENST00000478913 TSC1Q92574 1164 aa10.26□□□□□ -0.77
CCDC171-207ENST00000478913 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-207ENST00000478913 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
CCDC171-207ENST00000478913 USB1Q9BQ65 265 aaKnown RBP10.26□□□□□ -0.77
CCDC171-207ENST00000478913 ERCC6Q03468 1493 aa10.25□□□□□ -0.77
CCDC171-207ENST00000478913 TMEM259Q4ZIN3 620 aa10.25□□□□□ -0.77
CCDC171-207ENST00000478913 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
CCDC171-207ENST00000478913 TLL1O43897 1013 aa10.24□□□□□ -0.77
CCDC171-207ENST00000478913 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-207ENST00000478913 SPSB2Q99619 263 aa10.24□□□□□ -0.77
CCDC171-207ENST00000478913 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
CCDC171-207ENST00000478913 AP1G2O75843 785 aa10.23□□□□□ -0.77
CCDC171-207ENST00000478913 ADH1BP00325 375 aa10.23□□□□□ -0.77
CCDC171-207ENST00000478913 ILDR2Q71H61 639 aa10.23□□□□□ -0.77
CCDC171-207ENST00000478913 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
CCDC171-207ENST00000478913 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-207ENST00000478913 FLIIQ13045 1269 aa10.22□□□□□ -0.77
CCDC171-207ENST00000478913 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
CCDC171-207ENST00000478913 BANK1Q8NDB2 785 aa10.21□□□□□ -0.77
CCDC171-207ENST00000478913 MSS51Q4VC12 460 aa10.2□□□□□ -0.78
CCDC171-207ENST00000478913 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
CCDC171-207ENST00000478913 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
CCDC171-207ENST00000478913 MCM6Q14566 821 aa10.18□□□□□ -0.78
CCDC171-207ENST00000478913 DESI1Q6ICB0 168 aa10.18□□□□□ -0.78
CCDC171-207ENST00000478913 FAM160A2Q8N612 972 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-207ENST00000478913 JUNDP17535 347 aa10.17□□□□□ -0.78
CCDC171-207ENST00000478913 CTDSPL2Q05D32 466 aa10.17□□□□□ -0.78
CCDC171-207ENST00000478913 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
CCDC171-207ENST00000478913 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
CCDC171-207ENST00000478913 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
CCDC171-207ENST00000478913 SLC6A16Q9GZN6 736 aa10.16□□□□□ -0.78
CCDC171-207ENST00000478913 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CCDC171-207ENST00000478913 SNRKQ9NRH2 765 aa10.15□□□□□ -0.78
CCDC171-207ENST00000478913 APBB1O00213 710 aa10.13□□□□□ -0.79
CCDC171-207ENST00000478913 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-207ENST00000478913 DXOO77932 396 aaKnown RBP10.13□□□□□ -0.79
CCDC171-207ENST00000478913 MMP16P51512 607 aa10.13□□□□□ -0.79
CCDC171-207ENST00000478913 LYPD8Q6UX82 237 aa10.13□□□□□ -0.79
CCDC171-207ENST00000478913 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
CCDC171-207ENST00000478913 S1PR4O95977 384 aa10.12□□□□□ -0.79
CCDC171-207ENST00000478913 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
CCDC171-207ENST00000478913 PTPRNQ16849 979 aa10.12□□□□□ -0.79
CCDC171-207ENST00000478913 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
CCDC171-207ENST00000478913 BICRAQ9NZM4 1560 aa10.1□□□□□ -0.79
CCDC171-207ENST00000478913 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
CCDC171-207ENST00000478913 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-207ENST00000478913 TIMELESSQ9UNS1 1208 aa10.1□□□□□ -0.79
CCDC171-207ENST00000478913 CCNYL3P0C7X3 344 aa10.09□□□□□ -0.79
CCDC171-207ENST00000478913 GGCXP38435 758 aa10.09□□□□□ -0.79
CCDC171-207ENST00000478913 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
CCDC171-207ENST00000478913 FBXO41Q8TF61 875 aa10.08□□□□□ -0.8
CCDC171-207ENST00000478913 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
CCDC171-207ENST00000478913 RAD21O60216 631 aa10.07□□□□□ -0.8
CCDC171-207ENST00000478913 CTHP32929 405 aa10.07□□□□□ -0.8
CCDC171-207ENST00000478913 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
CCDC171-207ENST00000478913 POTECB2RU33 542 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms