RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 GNPATO15228 680 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 OATP04181 439 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 UGGT2Q9NYU1 1516 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 UACAQ9BZF9 1416 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 KCNC4Q03721 635 aa10.55□□□□□ -0.72
HOXB3-209ENST00000478644 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
HOXB3-209ENST00000478644 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
HOXB3-209ENST00000478644 TJAP1Q5JTD0 557 aa10.54□□□□□ -0.72
HOXB3-209ENST00000478644 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
HOXB3-209ENST00000478644 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
HOXB3-209ENST00000478644 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
HOXB3-209ENST00000478644 GLI2P10070 1586 aa10.52□□□□□ -0.72
HOXB3-209ENST00000478644 FECHP22830 423 aa10.52□□□□□ -0.73
HOXB3-209ENST00000478644 SLC4A3P48751 1232 aa10.52□□□□□ -0.73
HOXB3-209ENST00000478644 APLP1P51693 650 aa10.52□□□□□ -0.73
HOXB3-209ENST00000478644 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
HOXB3-209ENST00000478644 DISP1Q96F81 1524 aa10.51□□□□□ -0.73
HOXB3-209ENST00000478644 KDM5BQ9UGL1 1544 aa10.51□□□□□ -0.73
HOXB3-209ENST00000478644 GPIHBP1Q8IV16 184 aa10.5□□□□□ -0.73
HOXB3-209ENST00000478644 EEA1Q15075 1411 aa10.5□□□□□ -0.73
HOXB3-209ENST00000478644 ASXL2Q76L83 1435 aa10.5□□□□□ -0.73
HOXB3-209ENST00000478644 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
HOXB3-209ENST00000478644 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
HOXB3-209ENST00000478644 RNF40O75150 1001 aa10.48□□□□□ -0.73
HOXB3-209ENST00000478644 MTRQ99707 1265 aa10.48□□□□□ -0.73
HOXB3-209ENST00000478644 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
HOXB3-209ENST00000478644 IL21Q9HBE4 155 aa10.48□□□□□ -0.73
HOXB3-209ENST00000478644 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
HOXB3-209ENST00000478644 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
HOXB3-209ENST00000478644 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
HOXB3-209ENST00000478644 KDM6BO15054 1643 aa10.47□□□□□ -0.73
HOXB3-209ENST00000478644 CTTNBP2Q8WZ74 1663 aa10.46□□□□□ -0.74
HOXB3-209ENST00000478644 EPRSP07814 1512 aaKnown RBP10.43□□□□□ -0.74
HOXB3-209ENST00000478644 SLC10A3P09131 477 aa10.43□□□□□ -0.74
HOXB3-209ENST00000478644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
HOXB3-209ENST00000478644 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
HOXB3-209ENST00000478644 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
HOXB3-209ENST00000478644 ACTN4O43707 911 aaKnown RBP10.41□□□□□ -0.74
HOXB3-209ENST00000478644 ZNF516Q92618 1163 aa10.41□□□□□ -0.74
HOXB3-209ENST00000478644 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
HOXB3-209ENST00000478644 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.74
HOXB3-209ENST00000478644 MAP2K5Q13163 448 aa10.4□□□□□ -0.74
HOXB3-209ENST00000478644 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
HOXB3-209ENST00000478644 MAP3K4Q9Y6R4 1608 aa10.4□□□□□ -0.75
HOXB3-209ENST00000478644 TSPOAP1O95153 1857 aa10.39□□□□□ -0.75
HOXB3-209ENST00000478644 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
HOXB3-209ENST00000478644 ABCA8O94911 1581 aa10.39□□□□□ -0.75
HOXB3-209ENST00000478644 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
HOXB3-209ENST00000478644 ZPR1O75312 459 aa10.38□□□□□ -0.75
HOXB3-209ENST00000478644 RSPH4AQ5TD94 716 aa10.38□□□□□ -0.75
HOXB3-209ENST00000478644 PCDHB3Q9Y5E6 796 aa10.38□□□□□ -0.75
HOXB3-209ENST00000478644 CD109Q6YHK3 1445 aa10.38□□□□□ -0.75
HOXB3-209ENST00000478644 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
HOXB3-209ENST00000478644 IRF6O14896 467 aa10.37□□□□□ -0.75
HOXB3-209ENST00000478644 CFHP08603 1231 aa10.37□□□□□ -0.75
HOXB3-209ENST00000478644 CFAP43Q8NDM7 1665 aa10.37□□□□□ -0.75
HOXB3-209ENST00000478644 COPS2P61201 443 aa10.35□□□□□ -0.75
HOXB3-209ENST00000478644 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
HOXB3-209ENST00000478644 PPP1R18Q6NYC8 613 aa10.34□□□□□ -0.75
HOXB3-209ENST00000478644 BLOC1S3Q6QNY0 202 aa10.34□□□□□ -0.75
HOXB3-209ENST00000478644 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
HOXB3-209ENST00000478644 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
HOXB3-209ENST00000478644 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
HOXB3-209ENST00000478644 SAMD9Q5K651 1589 aa10.33□□□□□ -0.76
HOXB3-209ENST00000478644 LMOD2Q6P5Q4 547 aa10.32□□□□□ -0.76
HOXB3-209ENST00000478644 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
HOXB3-209ENST00000478644 ATP10BO94823 1461 aa10.31□□□□□ -0.76
HOXB3-209ENST00000478644 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
HOXB3-209ENST00000478644 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
HOXB3-209ENST00000478644 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
HOXB3-209ENST00000478644 ARAP3Q8WWN8 1544 aa10.31□□□□□ -0.76
HOXB3-209ENST00000478644 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 NR1I2O75469 434 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 GCGRP47871 477 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 NEO1Q92859 1461 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 KIF21BO75037 1637 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
HOXB3-209ENST00000478644 GGCXP38435 758 aa10.28□□□□□ -0.76
HOXB3-209ENST00000478644 CDK11AQ9UQ88 783 aaPredicted RBP10.28□□□□□ -0.76
HOXB3-209ENST00000478644 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 ZMYND10O75800 440 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 RDH13Q8NBN7 331 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
HOXB3-209ENST00000478644 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.77
HOXB3-209ENST00000478644 COL17A1Q9UMD9 1497 aaPredicted RBP10.27□□□□□ -0.77
HOXB3-209ENST00000478644 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
HOXB3-209ENST00000478644 ADGRL1O94910 1474 aa10.25□□□□□ -0.77
HOXB3-209ENST00000478644 MORN1Q5T089 497 aa10.25□□□□□ -0.77
HOXB3-209ENST00000478644 ADH1BP00325 375 aa10.24□□□□□ -0.77
HOXB3-209ENST00000478644 CD46P15529 392 aa10.24□□□□□ -0.77
HOXB3-209ENST00000478644 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
HOXB3-209ENST00000478644 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
HOXB3-209ENST00000478644 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
HOXB3-209ENST00000478644 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
HOXB3-209ENST00000478644 FUT2Q10981 343 aa10.23□□□□□ -0.77
HOXB3-209ENST00000478644 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
HOXB3-209ENST00000478644 NUP153P49790 1475 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms